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Methyl 4-((E)-2-{3-[(3-{ (E)-2-[4-(methoxycarbonyl)phenyl]- 1-diazenyl}-5,5-dimethylhexahydro-1-pyrimidinyl)methyl]-5,5-dimethylhexahydro-1-pyrimidinyl-1-diazenyl) benzoate. X-ray crystal structure

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Methyl 4-((E)-2-{3-[(3-{(E)-2-[4-(methoxycarbonyl)phenyl]-1-diazenyl}-5, 5-dimethyl hexahydro-1-pyrimidinyl)methyl]-5, 5- dimethylhexahydro-1- pyrimidinyl}-1- diazenyl) benzoate (1) has been synthesized by reaction of a mixture of formaldehyde and 2,2-dimethyl-1,3-propanediamine with p-methoxycarbonylbenzenediazonium chloride. The crystal structure of 1 has been determined by single crystal X-ray diffraction analysis. The crystals of 1 displayed problems of disorder; the asymmetric unit is built up by two independent molecules, which display disorder within a methoxycarbonyl group. The two independent molecules in the asymmetric unit are very similar, differing only slightly about the mutual orientation of the aryltriazenyl groups. With respect to the N–C–N bridge between the hexahydropyrimidinyl rings, the two equivalent fragments containing the triazene moieties are in a cis orientation. The N–N single bonds, in the range 1.319(4)–1.348(4) Å, and the N=N double bonds, in the range 1.255(5)–1.275(4) Å, indicate significant conjugations within the triazene moieties. All the hexahydropyrimidine six-membered rings adopt a chair conformation as shown by their puckering parameters. The crystal packing is determined only by simple van der Waals interactions. The crystal structure of 1 is compared with the previously reported structure of the unbranched hexahydropyrimidine analogue 2. Crystal data: 1 C29H40N8O4, triclinic, space group P-1, a = 13.9652(2), b = 14.2908(3), c = 16.6129(4) Å, α = 97.279(1), β = 90.872(1), γ = 107.385(1), V = 3133.6(1) Å3, for Z = 4.

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References

  1. Hooper, D.L.; Peori, M.B.; Vaughan, K. J. Org. Chem. 1998, 63, 7437.

    Article  PubMed  Google Scholar 

  2. Biradha, K.; Peori, M.B.; Vaughan, K.; Zaworotko, M.J. J. Chem Cryst. 1999, 29, 145.

    Article  CAS  Google Scholar 

  3. Peori, B.; Vaughan, K.; Bertolasi, V. J. Chem. Cryst. 2005, 35, 297.

    Google Scholar 

  4. Church, R.; Moser, S.; Peori, M.B.; Vaughan, K. Unpublished results. Manuscript in preparation.

  5. Otwinowski, Z.; Minor,W. In Methods in Enzymology; Carter, C.W.; Sweet, R.M., Eds.; Academic Press: London, 1997; Vol. 276 Part. A, pp. 307–326.

    Google Scholar 

  6. Altomare, A.; Burla, M.C.; Camalli, M.; Cascarano, G.; Giacovazzo, C.; Guagliardi, C.; Moliterni, A.G.; Polidori, C.; Spagna, R. J. Appl. Crystallogr. 1999, 32, 115.

    Article  CAS  Google Scholar 

  7. Sheldrick, G.M. SHELXL-97, Program for Refinement of Crystal Structures, University of Göttingen, Germany, 1997.

    Google Scholar 

  8. Nardelli, M. J. Appl. Crystallogr. 1995, 28, 659.

    Google Scholar 

  9. Burnett, M.N.; Johnson, C.K. ORTEP-III, Report ORNL-6895 Oak Ridge National Laboratory, Oak Ridge TN 1996.

  10. Cremer, D.; Pople, J.A. J. Am. Chem. Soc. 1975, 97, 1354.

    Google Scholar 

  11. Allen, F.H; Kennard, O.; Watson, D.G.; Brammer, G.; Orpen, G.; Taylor, R. J. Chem. Soc. Perkin Trans, 1987, 2, S1.

    Google Scholar 

  12. Bertolasi, V.; Glister, J.F.; Vaughan, K. J. Chem. Cryst. 2004, 34, 175–180

    Article  Google Scholar 

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Moser, S.L., Bertolasi, V. & Vaughan, K. Methyl 4-((E)-2-{3-[(3-{ (E)-2-[4-(methoxycarbonyl)phenyl]- 1-diazenyl}-5,5-dimethylhexahydro-1-pyrimidinyl)methyl]-5,5-dimethylhexahydro-1-pyrimidinyl-1-diazenyl) benzoate. X-ray crystal structure. J Chem Crystallogr 35, 307–312 (2005). https://doi.org/10.1007/s10870-005-3249-6

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  • DOI: https://doi.org/10.1007/s10870-005-3249-6

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