Abstract
We established a novel strategy for preparing uniformly stable isotope-labeled proteins by using suspension-cultured plant cells and an inducible virus vector encoding the research target. By using this new method, we demonstrated the expression of three proteins, namely, Escherichia coli dihydrofolate reductase (DHFR), chicken calmodulin (CaM), and porcine protein kinase C-dependent protein phosphatase-1 inhibitor with a molecular mass of 17-kDa (CPI-17). In addition, we successfully expressed bovine pancreatic trypsin inhibitor (BPTI), which contains three pairs of disulfide bonds, as the soluble form. In the most efficient case, as little as 50 ml culture yielded 3–4 mg 15N-labeled protein suitable for NMR experiments. The 1H-15N HSQC spectra of all of these proteins clearly indicated that their structures were identical to those of their counterparts reported previously. Thus, the present results suggest that our novel protocol is a potential method for NMR sample preparation.
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Abbreviations
- BPTI:
-
Bovine pancreatic trypsin inhibitor
- BY-2:
-
Nicotiana tabacum cv. Bright Yellow 2
- CPI-17(22-120):
-
Functional domain of 17-kDa protein phosphatase-1 inhibitor protein
- CaM:
-
Calmodulin
- DHFR:
-
Dihydrofolate reductase
- ER:
-
Endoplasmic reticulum
- HSQC:
-
Heteronuclear single quantum correlation
- NMR:
-
Nuclear magnetic resonance
- ToMV:
-
Tomato mosaic virus
- XVE:
-
Chimeric LexA-VP16-ER transactivator
References
Delaglio F, Grzesiek S, Vuister GW, Zhu G, Pfeifer J, Bax A (1995) NMRPipe: a multidimensional spectral processing system based on UNIX pipes. J Biomol NMR 3:277–293
Dohi K, Mori M (2007) Expression of active enzymes from an inducible tomato-mosaic virus-based vector in cultured transgenic tobacco BY-2 cells. Plant Biotechnol 24:367–373
Dohi K, Nishikiori M, Tamai A, Ishikawa M, Meshi T, Mori M (2006) Inducible virus-mediated expression of a foreign protein in suspension-cultured cells. Arch Virol 151:1075–1084
Doran PM (2000) Foreign protein production in plant tissue cultures. Curr Opin Biotechnol 11:199–204
Falzone CJ, Cavanagh J, Cowart M, Palmer AGIII, Matthews CR, Benkovic SJ, Wright PE (1994) 1H, 15N, and 13C resonance assignments, secondary structure, and the conformation of substrate in the binary folate complex of Escherichia coli dihydrofolate reductase. J Biomol NMR 4:349–366
Giddings G (2001) Transgenic plants as protein factories. Curr Opin Biotechnol 12:450–454
Gomord V, Faye L (2004) Posttranslational modification of therapeutic proteins in plants. Curr Opin Plant Biol 7:171–181
Hellwig S, Drossard J, Twyman RM, Fischer R (2004) Plant cell cultures for the production of recombinant proteins. Nat Biotech 22:1415–1422
Ikura M, Kay LE, Bax A (1990) A novel approach for sequential assignment of 1H, 13C, and 15N spectra of proteins: heteronuclear triple-resonance three-dimensional NMR spectroscopy. Application to calmodulin. Biochemistry 29:4659–4667
Kainosho M, Torizawa T, Iwashita Y, Terauchi T, Ono AM, Güntert P (2006) Optimal isotope labelling for NMR protein structure determinations. Nature 440:52–57
Kay LE, Ikura M, Tschudin R, Bax A (1990) Three-dimensional triple-resonance NMR spectroscopy of isotopically enriched proteins. J Magn Reson 89:496–514
Kigawa T, Muto Y, Yokoyama S (1995) Cell-free synthesis and amino acid-selective stable isotope labeling of proteins for NMR analysis. J Biomol NMR 6:129–134
Kitahara R, Sareth S, Yamada H, Ohmae E, Gekko K, Akasaka K (2000) High pressure NMR reveals active-site hinge motion of folate-bound Escherichia coli dihydrofolate reductase. Biochemistry 39:12789–12795
Lian LY, Middleton DA (2001) Labelling approaches for protein structural studies by solution-state and solid-state NMR. Prog.NMR Spectrosc 39:171–190
Morita EH, Sawasaki T, Tanaka R, Endo Y, Kohno T (2003) A wheat germ cell-free system is a novel way to screen protein folding and function. Protein Sci 12:1216–1221
Nagata T, Nemoto Y, Hasezawa S (1992) Tobacco BY-2 cell-line as the HeLa-cell in the cell biology of higher plants. Int Rev Cytol 132:1–30
Ohki S, Ikura M, Zhang M (1997) Identification of Mg2+ binding sites and the role of Mg2+ on target recognition by calmodulin. Biochemistry 36:4309–4316
Ohki S, Eto M, Shimizu M, Takada R, Brautigan DL, Kainosho M (2003) Distinctive solution conformation of phosphatase inhibitor CPI-17 substituted with aspartate at the phosphorylation-site threonine residue. J Mol Biol 5:1539–1547
Patzelt H, Goto N, Iwai H, Lundstrom K, Fernholz E (2002) Modern methods for expression of proteins in isotopically enriched form. In: Zerbe O (ed) BioNMR in drug research. Wiley-VCH Verlag GmbH & Co. KgaA, Weinheim, pp 1–38
Rule GS, Hitchens TK (2006) Fundamentals of protein NMR spectroscopy. Springer, Netherlands
Sakai T, Tochio H, Tenno T, Ito Y, Kokubo T, Hiroaki H, Shirakawa M (2006) In-cell NMR spectroscopy of proteins inside Xenopus lavis oocytes. J Biomol NMR 36:179–188
Sprangers R, Kay LE (2007) Quantitative dynamics and binding studies of the 20S proteasome by NMR. Nature 445:618–622
Terpe K (2003) Overview of tag protein fusions: from molecular and biochemical fundamentals to commercial systems. Appl Microbiol Biotechnol 60:523–533
Torizawa T, Shimizu M, Taoka M, Miyano H, Kainosho M (2004) Efficient production of isotopically labeled proteins by cell-free synthesis: a practical protocol. J Biomol NMR 30:311–325
Tugarinov V, Choy WY, Orekhov VY, Kay LE (2005) Solution NMR-derived global fold of a monomeric 82-kDa enzyme. Proc Natl Acad Sci USA 102:622–627
Wüthrich K (1986) NMR of proteins and nucleic acids. Wiley, New York
Yu MH, Weissman JS, Kim PS (1995) Contribution of individual side-chains to the stability of BPTI examined by alanine-scanning mutagenesis. J Mol Biol 249:388–397
Zuo J, Niu Q, Chua NH (2000) An estrogen receptor-based transactivator XVE mediates highly inducible gene expression in transgenic plants. Plant J 24:265–273
Acknowledgements
The plasmid for estradiol-inducible gene expression was kindly provided by Dr. Nam-Hai Chua of Rockefeller University. The authors thank technicians at the Center for Nano Materials and Technology, JAIST for maintenance of the 750 MHz NMR machine used in this study. Part of this project was supported by Kyoto-Advanced Nanotechnology Network operated in “Nanotechnology Network”, promoted by the Ministry of Education, Culture, Sports, Science, and Technology (MEXT), Japan. The work was financially supported in part by a Grant-in-Aid (#20510198 to S.O. and M.M.) from MEXT, Japan. M. M. is a grant holder of JST-CREST, Japan.
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Ohki, S., Dohi, K., Tamai, A. et al. Stable-isotope labeling using an inducible viral infection system in suspension-cultured plant cells. J Biomol NMR 42, 271–277 (2008). https://doi.org/10.1007/s10858-008-9283-x
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DOI: https://doi.org/10.1007/s10858-008-9283-x