Abstract
Sequence-specific assignment of the methyl groups in large proteins can be obtained from an MQ-(H)CC m H m -TOCSY experiment on uniformly 13C-labeled proteins without deuteration (Yang etal., 2004). Here the procedure is further demonstrated on a uniformly 13C-labeled α-chain or β-chain of human normal adult hemoglobin (65kDa) in the carbonmonoxy form. In addition, a strategy is presented for assigning protons of methyl-containing residues of uniformly 13C-labeled large proteins, on the basis of prior methyl assignments based on MQ-(H)CCH-TOCSY and H(C)C m H m -TOCSY experiments. Assignment of about 80% of the side-chain resonances of methyl-containing residues of carbonmonoxyhemoglobin has been obtained.
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D. Barrick J.A. Lukin V. Simplaceanu C. Ho (2004) Meth. Enzymol 378 28–54
A. Bax G.M. Clore A.M. Gronenborn (1990) J. Magn. Reson. 88 425–431
R.E. Dickerson I. Geis (1983) Hemoglobin: Structure, Function, Evolution, and Pathology Benjamin/Cummings Menlo Park, CA
A. Eletsky O. Moreira H. Kovacs K. Pervushin (2003) J. Biomol. NMR 26 167–179
S.W. Fesik H.L. Eaton E.T. Olejniczak E.R.P. Zuiderweg L.P. McIntosh F.W. Dahlquist (1990) J. Am. Chem. Soc. 112 886
K.H. Gardner R. Konrat L.E. Kay (1996) J. Biomol. NMR 8 351–356
K.H. Gardner X.C. Zhang K. Gehring L.E. Kay (1998) J. Am. Chem. Soc. 120 11738–11748
D.M. LeMaster (1990) Quart. Rev. Biophys. 23 133–174
W. Liu Y. Zheng D.P. Cistola D.W. Yang (2003) J. Biomol. NMR 27 351–364
J.A. Lukin C. Ho (2004) Chem. Rev. 104 1219–1230
J.A. Lukin G. Kontaxis V. Simplaceanu Y. Yuan A. Bax C. Ho (2003) Proc. Natl. Acad. Sci. USA 91 11113–11117
J.A. Lukin G. Kontaxis V. Simplaceanu Y. Yuan A. Bax C. Ho (2004) J. Biomol. NMR 28 203–204
G.T. Montelione B.A. Lyons S.D. Emerson M. Tashiro (1992) J. Am. Chem. Soc. 114 10974–10975
T.C. Mueser P.H. Rogers A. Arnone (2000) Biochemistry 39 15353–15364
M.M. Silva P.H. Rogers A. Arnone (1992) J. Biol. Chem 267 17248–17256
V. Simplaceanu J.A. Lukin T.Y. Fang M. Zou N.T. Ho C. Ho (2000) Biophys. J. 79 1146–1154
V. Tugarinov L.E. Kay (2003a) J. Am. Chem. Soc. 125 5701–5706
V. Tugarinov L.E. Kay (2003b) J. Am. Chem. Soc. 125 13868–13878
D. Uhrin S. Uhrinova C. Leadbeater J. Nairn N.C. Price P.N. Barlow (2000) J. Magn. Reson. 142 288–293
R.A. Venters B.T. Farmer C.A. Fierke L.D. Spicer (1996) J. Mol. Biol. 264 1101–1116
T. Yamazaki W. Lee C.H. Arrowsmith D.R. Muhandiram L.E. Kay (1994) J. Am. Chem. Soc. 116 11655–11666
D.W. Yang Y. Zheng D.J. Liu D.F. Wyss (2004) J. Am. Chem. Soc. 126 3710–3711
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Zheng, Y., Giovannelli, J.L., Ho, N.T. et al. Side-chain assignments of methyl-containing residues in a uniformly 13C-labeled hemoglobin in the carbonmonoxy form. J Biomol NMR 30, 423–429 (2004). https://doi.org/10.1007/s10858-004-4345-1
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DOI: https://doi.org/10.1007/s10858-004-4345-1