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Drivers and stressors of freshwater biodiversity patterns across different ecosystems and scales: a review

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Abstract

The present review with focus on the last decade (2000–2010) aims to (i) collecting the major hypotheses explaining freshwater biodiversity patterns, (ii) identifying the main stressors affecting freshwater biodiversity, and (iii) revealing information gaps regarding ecosystem types, organism groups, spatial and temporal scales to highlight research needs to better propose sound conservation measures. The comparative analysis addresses six organism groups ranging from microorganisms to fish in basins, rivers, lakes, wetlands, ponds and groundwater. Short-term studies at ecoregion and catchment scale focusing on invertebrates, macrophytes and fish in Palaearctic and Nearctic regions dominated. The most frequent hypotheses tested were the landscape filter concept, the species–area relationship, the metacommunity concept. Dominating natural drivers were area, heterogeneity and disturbance. Land use, eutrophication and habitat destruction were identified as most important stressors. Generally, freshwater biodiversity declined in response to these stressors in contrast to increasing biodiversity determined by natural drivers across all ecosystems. Preferred organism groups were fish and invertebrates, most frequently studied in rivers, in contrast to smaller organisms (e.g. bacteria) and, e.g. groundwater being underrepresented. Hypotheses originating from the last century are still tested in freshwater research, while novel concepts are either missing or untested. Protection of freshwater biodiversity is the ultimate challenge since it supports valuable ecosystems services ensuring perpetuation of mankind. For that, comprehensive large-scale studies with holistic approaches are urgently needed.

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References

  • Acreman, M. C. & M. J. Dunbar, 2004. Defining environmental river flow requirements—a review. Hydrology and Earth System Sciences 8: 861–876.

    Article  Google Scholar 

  • Agostinho, A. A., S. M. Thomaz & L. C. Gomes, 2005. Conservation of the biodiversity of Brazil’s inland waters. Conservation Biology 19: 646–652.

    Article  Google Scholar 

  • Aigo, J., V. Cussac, S. Peris, S. Ortubay, S. Gómez, H. López, M. Gross, J. Bariga & M. Batini, 2008. Distribution of introduced and native fish in Patagonia Argentina: patterns and changes in fish assemblages. Reviews in Fish Biology and Fisheries 18: 387–408.

    Article  Google Scholar 

  • Akasaka, M., N. Takamura, H. Mitsuhashi & Y. Kadono, 2010. Effects of land use on aquatic macrophyte diversity and water quality of ponds. Freshwater Biology 55: 909–922.

    Article  CAS  Google Scholar 

  • Alimov, A., 2001. Studies on biodiversity in the plankton, benthos, and fish communities, and the ecosystems of freshwater bodies differing in productivity. Biology Bulletin 28: 75–83.

    Article  Google Scholar 

  • Allen, A. P., J. H. Brown & J. F. Gillooly, 2002. Global biodiversity, biochemical kinetics, and the energetic-equivalence rule. Science 297: 1545–1548.

    Article  PubMed  CAS  Google Scholar 

  • Altermatt, F., V. I. Pajunen & D. Ebert, 2008. Climate change affects colonization dynamics in a metacommunity of three Daphnia species. Global Change Biology 14: 1209–1220.

    Article  Google Scholar 

  • Amarasinghe, U. S. & R. L. Welcomme, 2002. An analysis of fish species richness in natural lakes. Environmental Biology of Fishes 65: 327–339.

    Article  Google Scholar 

  • Amon, J. P., C. A. Thompson, Q. J. Carpenter & J. Miner, 2002. Temperate zone fens of the glaciated Midwestern USA. Wetlands 22: 301–317.

    Article  Google Scholar 

  • Amoros, C. & G. Bornette, 2002. Connectivity and biocomplexity in waterbodies of riverine floodplains. Freshwater Biology 47: 761–776.

    Article  Google Scholar 

  • Araújo, F. G., B. C. T. Pinto & T. P. Teixeira, 2008. Longitudinal patterns of fish assemblages in a large tropical river in southeastern Brazil: evaluating environmental influences and some concepts in river ecology. Hydrobiologia 618: 89–107.

    Article  Google Scholar 

  • Auderset-Joye, D. A., B. Oertli, A. Lehmann, R. Juge & J.-B. Lachavanne, 2006. The prediction of macrophyte species occurrence in Swiss ponds. Hydrobiologia 570: 175–182.

    Article  Google Scholar 

  • Bagella, S., S. Gascón, M. C. Caria, J. Sala, M. A. Mariani & D. Boix, 2010. Identifying key environmental factors related to plant and crustacean assemblages in Mediterranean temporary ponds. Biodiversity and Conservation 19: 1749–1768.

    Article  Google Scholar 

  • Balcombe, C. K., J. T. Anderson, R. H. Fortney & W. S. Kordek, 2005. Aquatic macroinvertebrate assemblages in mitigated and natural wetlands. Hydrobiologia 541: 175–188.

    Article  Google Scholar 

  • Balian, E. V., H. Segers, C. Lévêque & K. Martens, 2008. An introduction to the Freshwater Animal Diversity Assessment FADA project. Hydrobiologia 595: 3–8.

    Article  Google Scholar 

  • Barnett, A., B. E. Beisner & E. Beisner, 2010. Zooplankton biodiversity and lake trophic state: explanations invoking resource abundance and distribution. Ecology 88: 1675–1686.

    Article  Google Scholar 

  • Barquín, J. & R. G. Death, 2006. Spatial patterns of macroinvertebrate diversity in New Zealand springbrooks and rhithral streams. Journal of the North American Benthological Society 25: 768–786.

    Article  Google Scholar 

  • Baselga, A., 2008. Determinants of species richness, endemism and turnover in European longhorn beetles. Ecography 31: 263–271.

    Article  Google Scholar 

  • Batzer, D. P., C. R. Jackson & M. Mosner, 2000. Influences of riparian logging on plants and invertebrates in small, depressional wetlands of Georgia, USA. Hydrobiologia 441: 123–132.

    Article  Google Scholar 

  • Bêche, L. A. & B. Statzner, 2009. Richness gradients of stream invertebrates across the USA: taxonomy- and trait-based approaches. Biodiversity and Conservation 18: 3909–3930.

    Article  Google Scholar 

  • Bednarek, A. T., 2001. Undamming rivers: a review of the ecological impacts of dam removal. Environmental Management 27: 803–814.

    Article  PubMed  CAS  Google Scholar 

  • Bernez, I., H. Daniel, J. Haury & M. T. Ferreira, 2004. Combined effects of environmental factors and regulation on macrophyte vegetation along three rivers in western France. River Research and Applications 20: 43–59.

    Article  Google Scholar 

  • Biggs, J., P. Williams, M. Whitfield, P. Nicolet & A. Weatherby, 2005. 15 years of pond assessment in Britain: results and lessons learned from the work of pond conservation. Aquatic Conservation: Marine and Freshwater Ecosystems 15: 693–714.

    Article  Google Scholar 

  • Bilotta, G. S. & R. E. Brazier, 2008. Understanding the influence of suspended solids on water quality and aquatic biota. Water Research 42: 2849–2861.

    Article  PubMed  CAS  Google Scholar 

  • Bjerring, R., E. Becares, S. Declerck, E. M. Gross, L.-A. Hansson, T. Kairesalo, M. Nykänen, A. Halkiewicz, R. Kornijów, J. M. Conde-Porcuna, M. Seferlis, T. Nõges, B. Moss, S. Lildalet Amsinck, B. Vad Odgaars & E. Jeppesen, 2009. Subfossil Cladocera in relation to contemporary environmental variables in 54 Pan-European lakes. Freshwater Biology 54: 2401–2417.

    Article  CAS  Google Scholar 

  • Blanchet, S., G. Grenouillet, O. Beauchard, P. A. Tedesco, F. Leprieur, H. H. Dürr, F. Busson, T. Oberdorff & S. Brosse, 2010. Non-native species disrupt the worldwide patterns of freshwater fish body size: implications for Bergmann’s rule. Ecology Letters 13: 421–431.

    Article  PubMed  Google Scholar 

  • Boix, D., J. Sala & R. Moreno-Amich, 2001. The faunal composition of Espolla pond NE Iberian Peninsula: the neglected biodiversity of temporary waters. Wetlands 21: 577–592.

    Article  Google Scholar 

  • Bonada, N., C. Zamora-Munoz, M. Rieradevall & N. Prat, 2005. Ecological and historical filters constraining spatial caddisfly distribution in Mediterranean rivers. Freshwater Biology 50: 781–797.

    Article  Google Scholar 

  • Bonada, N., M. Rieradevall, H. Dallas, J. Davis, J. Day, R. Figueroa, V. H. Resh & N. Prat, 2008. Multi-scale assessment of macroinvertebrate richness and composition in Mediterranean-climate rivers. Freshwater Biology 53: 772–788.

    Article  Google Scholar 

  • Bonada, N., C. Múrria, C. Zamora-Muñoz, M. El Alami, J. M. Poquet, T. Puntí, J. L. Moreno, N. Bennars, J. Alba-Tercedor, C. Ribera & N. Prat, 2009. Using community and population approaches to understand how contemporary and historical factors have shaped species distribution in river ecosystems. Global Ecology and Biogeography 18: 202–213.

    Article  Google Scholar 

  • Boulton, A. J. & P. Marmonier, 2007. Hyporheic invertebrate community composition in streams of varying salinity in southwestern Australia: diversity peaks at intermediate thresholds. River Research and Applications 594: 579–594.

    Article  Google Scholar 

  • Bourdaghs, M., C. A. Johnston & R. R. Regal, 2006. Properties and performance of the floristic quality index in great lakes coastal wetlands. Wetlands 26: 718–735.

    Article  Google Scholar 

  • Boyd, E. S., D. E. Cummings & G. G. Geesey, 2007. Mineralogy influences structure and diversity of bacterial communities associated with geological substrata in a pristine aquifer. Microbial Ecology 54: 170–182.

    Article  PubMed  Google Scholar 

  • Brad, T., B. M. van Breukelen, M. Braster, N. M. van Straalen & W. F. M. Röling, 2008. Spatial heterogeneity in sediment-associated bacterial and eukaryotic communities in a landfill leachate-contaminated aquifer. FEMS Microbiology Ecology 65: 534–543.

    Article  PubMed  CAS  Google Scholar 

  • Brady, V. J., B. J. Cardinale, J. P. Gathman & T. M. Burton, 2002. Does facilitation of faunal recruitment benefit ecosystem restoration? An experimental study of invertebrate assemblages in wetland mesocosms. Restoration Ecology 10: 617–626.

    Article  Google Scholar 

  • Brinson, M. M. & A. I. Malvárez, 2002. Temperate freshwater wetlands: types, status, and threats. Environmental Conservation 29: 115–133.

    Article  Google Scholar 

  • Broadmeadow, S. & T. R. Nisbet, 2004. The effects of riparian forest management on the freshwater environment: a literature review of best management practice. Hydrology and Earth System Sciences 8: 286–305.

    Article  Google Scholar 

  • Brönmark, C. & L.-A. Hansson, 2002. Environmental issues in lakes and ponds: current state and perspectives. Environmental Conservation 29: 290–306.

    Article  CAS  Google Scholar 

  • Brooks, R. T., 2000. Annual and seasonal variation and the effects of hydroperiod on benthic macroinvertebrates of seasonal forest “vernal” ponds in central Massachusetts, USA. Wetlands 20: 707–715.

    Article  Google Scholar 

  • Buckley, L. B. & W. Jetz, 2007. Environmental and historical constraints on global patterns of amphibian richness. Proceedings of the Royal Society B 274: 1167–1173.

    Article  PubMed  Google Scholar 

  • Buckton, S. T. & S. J. Ormerod, 2002. Global patterns of diversity among the specialist birds of riverine landscapes. Freshwater Biology 47: 695–709.

    Article  Google Scholar 

  • Bunn, S. E. & A. H. Arthington, 2002. Basic principles and ecological consequences of altered flow regimes for aquatic biodiversity. Environmental Management 30: 492–507.

    Article  PubMed  Google Scholar 

  • Capers, R. S., R. Selsky & G. J. Bugbee, 2010. The relative importance of local conditions and regional processes in structuring aquatic plant communities. Freshwater Biology 55: 952–966.

    Article  Google Scholar 

  • Carchini, G., A. G. Solimini & A. Ruggiero, 2005. Habitat characteristics and odonate diversity in mountain ponds of central Italy. Aquatic Conservation: Marine and Freshwater Ecosystems 15: 573–581.

    Article  Google Scholar 

  • Castellarini, F., F. Malard, M.-J. Dole-Olivier & J. Gibert, 2007. Modelling the distribution of stygobionts in the Jura Mountains eastern France Implications for the protection of ground waters. Diversity and Distributions 13: 213–224.

    Article  Google Scholar 

  • Chalcraft, D. R. & W. J. Resetarits, 2010. Predator identity and ecological impacts: functional redundancy or functional diversity? Ecology 84: 2407–2418.

    Article  Google Scholar 

  • Chen, L. & Z. Lin, 2008. The effect of habitat destruction on metapopulations with the Allee-like effect: a study case of Yancheng in Jiangsu Province, China. Ecological Modelling 213: 356–364.

    Article  Google Scholar 

  • Chipps, S. R., D. E. Hubbard, K. B. Werlin, N. J. Haugerud, K. A. Powell, J. Thompson & T. Johnson, 2006. Association between wetland disturbance and biological attributes in floodplain wetlands. Wetlands 26: 497–508.

    Article  Google Scholar 

  • Claret, C. & A. J. Boulton, 2003. Diel variation in surface and subsurface microbial activity along a gradient of drying in an Australian sand-bed stream. Freshwater Biology 48: 1739–1755.

    Article  CAS  Google Scholar 

  • Clarke, A., R. MacNally, N. Bond & P. S. Lake, 2008. Macroinvertebrate diversity in headwater streams: a review. Freshwater Biology 53: 1707–1721.

    Article  Google Scholar 

  • Cobbaert, D., S. E. Bayley & J.-L. Greter, 2010. Effects of a top invertebrate predator Dytiscus alaskanus; Coleoptera: Dytiscidae on fishless pond ecosystems. Hydrobiologia 644: 103–114.

    Article  CAS  Google Scholar 

  • Cornell, H. V. & J. H. Lawton, 1992. Species interactions, local and regional processes, and limits to the richness of ecological communities: a theoretical perspective. Journal of Animal Ecology 61: 1–12.

    Article  Google Scholar 

  • Corvalan, C., S. Hales & A. McMichael, 2005. Ecosystems and Human Well-Being: Health Synthesis: A Report of the Millennium Ecosystem Assessment. World Health Organization, Geneva.

    Google Scholar 

  • Crain, C. M., L. K. Albertson & M. D. Bertness, 2008. Secondary succession dynamics in estuarine marshes across landscape-scale salinity gradients. Ecology 89: 2889–2899.

    Article  PubMed  Google Scholar 

  • Culver, D. C., T. Pipan & K. Schneider, 2009. Vicariance, dispersal and scale in the aquatic subterranean fauna of karst regions. Freshwater Biology 54: 918–929.

    Article  Google Scholar 

  • Cumberlidge, N., P. K. L. Ng, D. C. J. Yeo, C. Magalhães, M. R. Campos, F. Alvarez, T. Naruse, S. R. Daniels, L. J. Esser, F. Y. K. Attipoe, F.-L. Clotilde-Ba, W. Darwall, A. McIvor, J. E. M. Baillie, B. Collen & M. Ramj, 2009. Freshwater crabs and the biodiversity crisis: importance, threats, status, and conservation challenges. Biological Conservation 142: 1665–1673.

    Article  Google Scholar 

  • Cussac, V. E., D. A. Fernández, S. E. Gómez & H. L. López, 2009. Fishes of southern South America: a story driven by temperature. Fish Physiology and Biochemistry 35: 29–42.

    Article  PubMed  CAS  Google Scholar 

  • Danielopol, D. L., M. Artheau & P. Marmonier, 2009. Site prioritisation for the protection of rare subterranean species—the cases of two ostracods from south-western France. Freshwater Biology 54: 877–884.

    Article  Google Scholar 

  • Datry, T., S. Larned & M. Scarsbrook, 2007. Responses of hyporheic invertebrate assemblages to large-scale variation in flow permanence and surface-subsurface exchange. Freshwater Biology 52: 1452–1462.

    Article  Google Scholar 

  • Dauwalter, D. C., D. K. Splinter, W. L. Fisher & R. A. Marston, 2007. Biogeography ecoregions, and geomorphology affect fish species composition in streams of eastern Oklahoma, USA. Environmental Biology of Fishes 82: 237–249.

    Article  Google Scholar 

  • De Meester, L., S. Declerck, R. Stoks, G. Louette, F. Van De Meutter, T. De Bie, E. Michels & L. Brendonck, 2005. Ponds and pools as model systems in Conservation Biology ecology and evolutionary biology. Aquatic Conservation: Marine and Freshwater Ecosystems 15: 715–725.

    Article  Google Scholar 

  • Declerck, S., J. Vandekerkhove, L. Johansson, K. Muylaert, J. Conde-Porcuna, K. van der Gucht, C. Peirez-Martinez, T. Lauridsen, K. Schwenk, G. Zwart, W. Rommens, J. Lpez-Ramos, E. Jeppesen, W. Vyverman, L. Brendonck, L. De Meester, et al., 2005. Multi-group biodiversity in shallow lakes along gradients of phosphorus and water plant cover. Ecology 86: 1905–1915.

    Article  Google Scholar 

  • Deharveng, L., F. Stoch, J. Gibert, A. Bedos, D. Galassi, M. Zagmajster, A. Brancelj, A. Camacho, F. Fiers, P. Martin, N. Giani, G. Magniez & P. Marmonier, 2009. Groundwater biodiversity in Europe. Freshwater Biology 54: 709–726.

    Article  Google Scholar 

  • deLipthay, J. R., K. Johnsen, H.-J. Albrechtsen, P. Rosenberg & J. Aamand, 2004. Bacterial diversity and community structure of a sub-surface aquifer exposed to realistic low herbicide concentrations. FEMS Microbiology Ecology 49: 59–69.

    Article  CAS  Google Scholar 

  • Della Bella, V. & L. Mancini, 2009. Freshwater diatom and macroinvertebrate diversity of coastal permanent ponds along a gradient of human impact in a Mediterranean eco-region. Hydrobiologia 634: 25–41.

    Article  Google Scholar 

  • Denoel, M. & G. F. Ficetola, 2008. Conservation of newt guilds in an agricultural landscape of Belgium: the importance of aquatic and terrestrial habitats. Aquatic Conservation: Marine and Freshwater Ecosystems 18: 714–728.

    Article  Google Scholar 

  • Denoel, M., G. Dzukic & M. L. Kalezic, 2005. Effects of widespread fish introductions on paedomorphic newts in Europe. Conservation Biology 19: 162–170.

    Article  Google Scholar 

  • Dole-Olivier, M.-J., F. Malard, D. Martin, T. Lefébure & J. Gibert, 2009. Relationships between environmental variables and groundwater biodiversity at the regional scale. Freshwater Biology 54: 797–813.

    Article  CAS  Google Scholar 

  • Downes, B. J., L. A. Barmuta, P. G. Fairweather, D. P. Faith, M. J. Keough, P. S. Lake, B. D. Mapstone & G. P. Quinn, 2002. Monitoring Ecological Impacts. Concepts and Practice in Flowing Waters. Cambridge University Press, Cambridge

    Book  Google Scholar 

  • Drakou, E. G., D. C. Bobori, A. S. Kallimanis, A. D. Mazaris, S. P. Sgardelis & J. D. Pantis, 2009. Freshwater fish community structured more by dispersal limitation than by environmental heterogeneity. Ecology of Freshwater Fish 18: 369–379.

    Article  Google Scholar 

  • Drenovsky, R. E., K. P. Feris, K. M. Batten & K. Hristova, 2008. New and current microbiological tools for ecosystem ecologists: towards a goal of linking structure and function. The American Midland Naturalist 160: 140–159.

    Article  Google Scholar 

  • Dudgeon, D., A. H. Arthington, M. O. Gessner, Z.-I. Kawabata, D. J. Knowler, C. Lévêque, R. J. Naiman, A.-H. Prieur-Richard, D. Soto, M. L. J. Stiassny & C. A. Sullivan, 2006. Freshwater biodiversity: importance, threats, status and conservation challenges. Biological Reviews 81: 163–182.

    Article  PubMed  Google Scholar 

  • Ehrlich, P. R. & A. H. Ehrlich, 1981. Extinction: The Causes and Consequences of the Disappearance of Species. Random House, New York.

    Google Scholar 

  • Eitam, A., C. Noreña & L. Blaustein, 2004. Microturbellarian species richness and community similarity among temporary pools: relationships with habitat properties. Biodiversity and Conservation 13: 2107–2117.

    Article  Google Scholar 

  • Elton, C. S., 1958. The Ecology of Invasions by Animals and Plants. Methuen and Co. Ltd., London.

    Google Scholar 

  • Emery, N. C., P. J. Ewanchuk & M. D. Bertness, 2001. Competition and salt-marsh plant zonation: stress tolerators may be dominant competitors. Ecology 82: 2471–2485.

    Article  Google Scholar 

  • Engel, A. S., N. Lee, M. L. Porter, L. A. Stern, P. C. Bennett & M. Wagner, 2003. Filamentous “Epsilonproteobacteria” dominate microbial mats from sulfidic cave springs. Applied and Environmental Microbiology 69: 5503–5511.

    Article  PubMed  CAS  Google Scholar 

  • Englund, G., F. Johansson, P. Olofsson, J. Salonsaari & J. Ohman, 2009. Predation leads to assembly rules in fragmented fish communities. Ecology Letters 12: 663–671.

    Article  PubMed  Google Scholar 

  • Fahd, K., A. Arechederra, M. Florencio, D. León & L. Serrano, 2009. Copepods and branchiopods of temporary ponds in the Doñana Natural Area SW Spain: a four-decade record 1964–2007. Hydrobiologia 634: 219–230.

    Article  Google Scholar 

  • Fahy, A., G. Lethbridge, R. Earle, A. S. Ball, K. N. Timmis & T. J. McGenity, 2005. Effects of long-term benzene pollution on bacterial diversity and community structure in groundwater. Environmental Microbiology 7: 1192–1199.

    Article  PubMed  CAS  Google Scholar 

  • Fairchild, G. W., A. M. Faulds & J. F. Matta, 2000. Beetle assemblages in ponds: effects of habitat and site age. Freshwater Biology 44: 523–534.

    Article  Google Scholar 

  • Fawley, M. W., K. P. Fawley & M. A. Buchheim, 2004. Molecular diversity among communities of freshwater microchlorophytes. Microbial Ecology 48: 489–499.

    Article  PubMed  CAS  Google Scholar 

  • Febria, C. M., R. R. Fulthorpe & D. D. Williams, 2009. Characterizing seasonal changes in physicochemistry and bacterial community composition in hyporheic sediments. Hydrobiologia 647: 113–126.

    Article  CAS  Google Scholar 

  • Fernandes, C. C., J. Podos & J. G. Lundberg, 2004. Amazonian ecology: tributaries enhance the diversity of electric fishes. Science 305: 1960–1962.

    Article  PubMed  CAS  Google Scholar 

  • Ferreira, D., F. Malard, M.-J. Dole-Olivier & J. Gibert, 2007. Obligate groundwater fauna of France: diversity patterns and conservation implications. Biodiversity and Conservation 16: 567–596.

    Article  Google Scholar 

  • Filipe, A. F., M. F. Magalhães & M. J. Collares-Pereira, 2010. Native and introduced fish species richness in Mediterranean streams: the role of multiple landscape influences. Diversity and Distributions 16: 773–785.

    Article  Google Scholar 

  • Finke, D. L. & R. F. Denno, 2004. Predator diversity dampens trophic cascades. Nature 429: 22–24.

    Article  CAS  Google Scholar 

  • Finlay, B. J. & T. Fenchel, 2004. Cosmopolitan metapopulations of free-living microbial eukaryotes. Protist 55: 237–244.

    Article  Google Scholar 

  • Finn, D. S. & L. N. Poff, 2005. Variability and convergence in benthic communities along the longitudinal gradients of four physically similar Rocky Mountain streams. Freshwater Biology 50: 243–261.

    Article  Google Scholar 

  • Foulquier, A., F. Malard, T. Lefébure, C. J. Douady & J. Gibert, 2008. The imprint of Quaternary glaciers on the present-day distribution of the obligate groundwater amphipod Niphargus virei (Niphargidae). Journal of Biogeography 35: 552–564.

    Article  Google Scholar 

  • Fowler, R. & R. Death, 2001. The effect of environmental stability on hyporheic community structure. Hydrobiologia 445: 85–95.

    Article  Google Scholar 

  • Freestone, A. L. & S. Harrison, 2006. Regional enrichment of local assemblages is robust to variation in local productivity, abiotic gradients, and heterogeneity. Ecology Letters 9: 95–102.

    Article  PubMed  Google Scholar 

  • Frisch, D., B. S. Libman, S. J. D’Surney & S. T. Threlkeld, 2005. Diversity of floodplain copepods Crustacea modified by flooding: species richness, diapause strategies and population genetics. Archiv für Hydrobiologie 162: 1–17.

    Article  CAS  Google Scholar 

  • Galassi, D. M. P., F. Stoch, B. Fiasca, T. Di Lorenzo & E. Gattone, 2009. Groundwater biodiversity patterns in the Lessinian Massif of northern Italy. Freshwater Biology 54: 830–847.

    Article  CAS  Google Scholar 

  • Galatowitsch, S. M., 2009. Restoring prairie pothole wetlands: does the species pool concept offer decision-making guidance for re-vegetation? Applied Vegetation Science 9: 261–270.

    Article  Google Scholar 

  • Gallardo, B., S. Gascón, Á. Cabezas, M. Gonzalez, M. García & F. A. Comín, 2009. Relationship between invertebrate traits and lateral environmental gradients in a Mediterranean river-floodplain. Archiv für Hydrobiologie 173: 281–292.

    Google Scholar 

  • Gardezi, T. & A. Gonzalez, 2008. Scale dependence of species–energy relationships: evidence from fishes in thousands of lakes. The American Naturalist 171: 800–815.

    Article  PubMed  Google Scholar 

  • Gaston, K. J., 2000. Global patterns in biodiversity. Nature 42: 220–227.

    Article  Google Scholar 

  • Gibert, J. & D. C. Culver, 2009. Assessing and conserving groundwater biodiversity: an introduction. Freshwater Biology 54: 639–648.

    Article  Google Scholar 

  • Gido, K. B., J. F. Schaefer & J. A. Falke, 2009. Convergence of fish communities from the littoral zone of reservoirs. Freshwater Biology 54: 1163–1177.

    Article  Google Scholar 

  • Gilpin, M. E. & I. A. Hanksi, 1991. Metapopulation Dynamics: Empirical and Theoretical Investigations. Academic Press, London.

    Google Scholar 

  • Gray, D. & J. S. Harding, 2009. Braided river benthic diversity at multiple spatial scales: a hierarchical analysis of β diversity in complex floodplain systems. Journal of the North American Benthological Society 28: 537–551.

    Article  Google Scholar 

  • Griffiths, D., 2006. Pattern and process in the ecological biogeography of European freshwater fish. Journal of Animal Ecology 75: 734–751.

    Article  PubMed  Google Scholar 

  • Grime, J. P., 1973. Competitive exclusion in herbaceous vegetation. Nature 242: 344–347.

    Article  Google Scholar 

  • Gutierrez-Estrada, J. C. & D. T. Bilton, 2010. A heuristic approach to predicting water beetle diversity in temporary and fluctuating waters. Ecological Modeling 221: 1451–1462.

    Article  CAS  Google Scholar 

  • Hahn, H. J. & A. Fuchs, 2009. Distribution patterns of groundwater communities across aquifer types in south-western Germany. Freshwater Biology 54: 848–860.

    Article  Google Scholar 

  • Hart, D. D. & N. L. Poff, 2002. How dams vary and why it matters for the emerging science of dam removal. BioScience 52: 659–668.

    Article  Google Scholar 

  • Hawkins, B. A., E. E. Porter & J. A. F. Diniz-Filho, 2003. Productivity and history as descriptors of the latitudinal diversity gradient for terrestrial birds. Ecology 84: 1608–1623.

    Article  Google Scholar 

  • Heegaard, E., 2004. Trends in aquatic macrophyte species turnover in Northern Ireland—which factors determine the spatial distribution of local species turnover? Global Ecology and Biogeography 13: 397–408.

    Article  Google Scholar 

  • Heino, J., 2005. Functional biodiversity of macroinvertebrate assemblages along major ecological gradients of boreal headwater streams. Freshwater Biology 50: 1578–1587.

    Article  Google Scholar 

  • Heino, J., L. M. Bini, S. M. Karjalainen, H. Mykrä, J. Soininen, L. C. G. Vieira & J. A. F. Diniz-Filho, 2010. Geographical patterns of micro-organismal community structure: are diatoms ubiquitously distributed across boreal streams? Oikos 119: 129–137.

    Article  Google Scholar 

  • Hillebrand, H., 2004. On the generality of the latitudinal diversity gradient. The American Naturalist 163: 192–211.

    Article  PubMed  Google Scholar 

  • Hillebrand, H. & T. Blenckner, 2002. Regional and local impact on species diversity—from pattern to processes. Oecologia 132: 479–491.

    Article  Google Scholar 

  • Hoeinghaus, D. J., K. O. Winemiller & J. S. Birnbaum, 2007. Local and regional determinants of stream fish assemblage structure: inferences based on taxonomic vs. functional groups. Journal of Biogeography 34: 324–338.

    Article  Google Scholar 

  • Holcík, J., 2003. Changes in the fish fauna and fisheries in the Slovak section of the Danube River: a review. Annales de Limnologie-International Journal of Limnology 39: 177–195.

    Article  Google Scholar 

  • Holmes, P. M., 2005. A decision-making framework for restoring riparian zones degraded by invasive alien plants in South Africa. South African Journal of Science 101: 553–564.

    Google Scholar 

  • Hubbell, S. P., 2001. The Unified Neutral Theory of Biodiversity and Biogeography. Princeton University Press, New Jersey.

    Google Scholar 

  • Irz, P., C. Argillier & T. Oberdorff, 2004. Native and introduced fish species richness in French lakes: local and regional influences. Global Ecology and Biogeography 13: 335–344.

    Article  Google Scholar 

  • IUCN, 2011 http://www.iucnredlist.org/.

  • Jeffries, M., 2008. The spatial and temporal heterogeneity of macrophyte communities in thirty small, temporary ponds over a period of ten years. Ecography 31: 765–775.

    Article  Google Scholar 

  • Jenkins, D. G. & D. Rinne, 2008. Red herring or low illumination? The peninsula effect revisited. Journal of Biogeography 35: 2128–2137.

    Article  Google Scholar 

  • Johnson, A., N. Llewellyn, J. Smith, C. van der Gast, A. Lilley, A. Singer & I. Thompson, 2004. The role of microbial community composition and groundwater chemistry in determining isoproturon degradation potential in UK aquifers. FEMS Microbiology Ecology 49: 71–82.

    Article  PubMed  CAS  Google Scholar 

  • Johnson, K., M. Allen & K. Havens, 2007a. A review of littoral vegetation, fisheries, and wildlife responses to hydrologic variation at Lake Okeechobee. Wetlands 27: 110–126.

    Article  Google Scholar 

  • Johnson, R. K., M. T. Furse, D. Hering & L. Sandin, 2007b. Ecological relationships between stream communities and spatial scale: implications for designing catchment-level monitoring programs. Freshwater Biology 52: 939–958.

    Article  Google Scholar 

  • Kahlert, M., 2002. Horizontal variation of biomass and C:N:P ratios of benthic algae in lakes. Hydrobiologia 489: 171–177.

    Article  CAS  Google Scholar 

  • Kerr, J. T. & L. Packer, 1997. Habitat heterogeneity as a determinant of mammal species richness in high energy regions. Nature 385: 252–254.

    Article  CAS  Google Scholar 

  • Kerr, J. T., R. Vincent & D. J. Currie, 1998. Lepidopteran species richness patterns in North America. EcoScience 5: 448–453.

    Google Scholar 

  • Kimura, H., M. Sugihara, H. Yamamoto, B. K. C. Patel, K. Kato & S. Hanada, 2005. Microbial community in a geothermal aquifer associated with the subsurface of the Great Artesian Basin, Australia. Extremophiles 9: 407–414.

    Article  PubMed  CAS  Google Scholar 

  • Kjellin, J., S. Hallin & A. Wörman, 2007. Spatial variations in denitrification activity in wetland sediments explained by hydrology and denitrifying community structure. Water Research 41: 4710–4720.

    Article  PubMed  CAS  Google Scholar 

  • Kleinebecker, T., N. Hölzel & A. Vogel, 2010. Patterns and gradients of diversity in South Patagonian ombrotrophic peat bogs. Australian Ecology 35: 1–12.

    Article  Google Scholar 

  • Kneitel, J. M. & C. L. Lessin, 2010. Ecosystem-phase interactions: aquatic eutrophication decreases terrestrial plant diversity in California vernal pools. Oecologia 163: 461–469.

    Article  PubMed  Google Scholar 

  • Knight, T. M., M. W. McCoy, J. M. Chase, K. A. McCoy & R. D. Holt, 2005. Trophic cascades across ecosystems. Nature 437: 880–883.

    Article  PubMed  CAS  Google Scholar 

  • Lair, N., 2006. A review of regulation mechanisms of metazoan plankton in riverine ecosystems: aquatic habitat versus biota. River Research and Applications 22: 567–593.

    Article  Google Scholar 

  • Lamouroux, N., N. L. Poff & P. L. Angermeier, 2010. Intercontinental convergence of stream fish community traits along geomorphic and hydraulic gradients. Ecological Society of America 83: 1792–1807.

    Google Scholar 

  • Lehman, R. M., F. F. Roberto, D. Earley, D. F. Bruhn, S. E. Brink, S. P. O. Connell, M. E. Delwiche & F. S. Colwell, 2001. Attached and unattached bacterial communities in a 120-meter corehole in an acidic, crystalline rock aquifer. Applied and Environmental Microbiology 69: 2095–2106.

    Article  Google Scholar 

  • Leibold, M. A. & J. Norberg, 2004. Biodiversity in metacommunities: plankton as complex adaptive systems? Limnology and Oceanography 49: 1278–1289.

    Article  Google Scholar 

  • Leprieur, F., O. Beauchard, S. Blanchet, T. Oberdorff & S. Brosse, 2008. Fish invasions in the world’s river systems: when natural processes are blurred by human activities. PLoS Biology 6: 0404–0408.

    CAS  Google Scholar 

  • Leprieur, F., J. D. Olden, S. Lek & S. Brosse, 2009. Contrasting patterns and mechanisms of spatial turnover for native and exotic freshwater fish in Europe. Journal of Biogeography 36: 1899–1912.

    Article  Google Scholar 

  • Light, T. & M. P. Marchetti, 2007. Distinguishing between invasions and habitat changes as drivers of diversity loss among California’s freshwater fishes. Conservation Biology 21: 434–446.

    Article  PubMed  Google Scholar 

  • Lindström, E. S. & A.-K. Bergström, 2004. Influence of inlet bacteria on bacterioplankton assemblage composition in lakes of different hydraulic retention time. Limnology and Oceanography 49: 125–136.

    Article  Google Scholar 

  • Lindström, E. S., M. Forslund, G. Algesten & A.-K. Bergström, 2006. External control of bacterial community structure in lakes. Limnology and Oceanography 51: 339–342.

    Article  Google Scholar 

  • Long, Z. T. & P. J. Morin, 2005. Effects of organism size and community composition on ecosystem functioning. Ecology Letters 8: 1271–1282.

    Article  Google Scholar 

  • Longhi, M. L. & B. E. Beisner, 2010. Patterns in taxonomic and functional diversity of lake phytoplankton. Freshwater Biology 55: 1349–1366.

    Article  CAS  Google Scholar 

  • MacArthur, R. H., 1955. Fluctuations of animal populations and a measure of community stability. Ecology 36: 533–536.

    Article  Google Scholar 

  • Malard, F., C. Boutin, A. I. Camacho, D. Ferreira, G. Michel, B. Sket & F. Stoch, 2009. Diversity patterns of stygobiotic crustaceans across multiple spatial scales in Europe. Freshwater Biology 54: 756–776.

    Article  Google Scholar 

  • Marchetti, M. P., T. Light, P. B. Moyle & J. H. Viers, 2010. Fish invasions in California watersheds: testing hypotheses using landscape patterns. Ecological Society of America 14: 1507–1525.

    Google Scholar 

  • Martin, P., C. De Broyer, F. Fiers, G. Michel, R. Sablon & K. Wouters, 2009. Biodiversity of Belgian groundwater fauna in relation to environmental conditions. Freshwater Biology 54: 814–829.

    Article  Google Scholar 

  • Mason, N. W. H., C. Lanoiselée, D. Mouillot, P. Irz & C. Argillier, 2007. Functional characters combined with null models reveal inconsistency in mechanisms of species turnover in lacustrine fish communities. Oecologia 153: 441–452.

    Article  PubMed  Google Scholar 

  • Mazaris, A. D., M. Moustaka-Gouni, E. Michaloudi & D. C. Bobori, 2010. Biogeographical patterns of freshwater micro- and macroorganisms: a comparison between phytoplankton, zooplankton and fish in the eastern Mediterranean. Journal of Biogeography 37: 1341–1351.

    Article  Google Scholar 

  • McAbendroth, L., P. M. Ramsay, A. Foggo, S. D. Rundle & D. T. Bilton, 2005. Does macrophyte fractal complexity drive invertebrate diversity, biomass and body size distributions? Oikos 111: 279–290.

    Article  Google Scholar 

  • McHugh, P. A., A. R. McIntosh & P. G. Jellyman, 2010. Dual influences of ecosystem size and disturbance on food chain length in streams. Ecology Letters 13: 881–890.

    Article  PubMed  Google Scholar 

  • Mehner, T., M. Diekmann, U. Bramick & R. Lemcke, 2005. Composition of fish communities in German lakes as related to lake morphology, trophic state, shore structure and human-use intensity. Freshwater Biology 50: 70–85.

    Article  CAS  Google Scholar 

  • Mehner, T., K. Holmgren, T. L. Lauridsen, E. Jeppesen & M. Diekmann, 2007. Lake depth and geographical position modify lake fish assemblages of the European “Central Plains” ecoregion. Freshwater Biology 52: 2285–2297.

    Article  CAS  Google Scholar 

  • Meyer, J. L., D. L. Strayer, J. B. Wallace, S. L. Eggert, G. S. Helfman & N. E. Leonard, 2007. The contribution of headwater streams to biodiversity in river networks. Journal of the American Water Resources Association 43: 86–103.

    Article  Google Scholar 

  • Milner, A. M., J. E. Brittain, E. Castella & G. E. Petts, 2001. Trends of macroinvertebrate community structure in glacier-fed rivers in relation to environmental conditions: a synthesis. Freshwater Biology 46: 1833–1847.

    Article  Google Scholar 

  • Mori, T., M. Murakami & T. Saitoh, 2009. Latitudinal gradients in stream invertebrate assemblages at a regional scale on Hokkaido Island, Japan. Freshwater Biology 55: 1520–1532.

    Article  Google Scholar 

  • Mosepele, K., P. B. Moyle, G. S. Merron, D. R. Purkey & B. Mosepele, 2009. Fish, floods, and ecosystem engineers: aquatic conservation in the Okavango delta, Botswana. BioScience 59: 53–64.

    Article  Google Scholar 

  • Murphy, K., 2002. Plant communities and plant diversity in softwater lakes of northern Europe. Aquatic Botany 73: 287–324.

    Article  Google Scholar 

  • Nabout, J. C., T. Siqueira, L. M. Bini & I. D. S. Nogueira, 2009. No evidence for environmental and spatial processes in structuring phytoplankton communities. Acta Oecologica 35: 720–726.

    Article  Google Scholar 

  • Ney-Nifle, M. & M. Mangel, 2000. Habitat loss and changes in the species–area relationship. Conservation Biology 14: 893–898.

    Article  Google Scholar 

  • Nilsson, C., F. Lepori, B. Malmqvist, E. Törnlund, N. Hjerdt, J. M. Helfield, D. Palm, J. Östergren, R. Jansson, E. Brännäs & H. Lundqvist, 2005. Forecasting environmental responses to restoration of rivers used as log floatways: an interdisciplinary challenge. Ecosystems 8: 779–800.

    Article  Google Scholar 

  • Olden, J. D. & N. L. Poff, 2010. Ecological processes driving biotic homogenization: testing a mechanistic model using fish faunas. Ecology 85: 1867–1875.

    Article  Google Scholar 

  • Olden, J., N. Poff & M. Mckinney, 2006. Forecasting faunal and floral homogenization associated with human population geography in North America. Biological Conservation 127: 261–271.

    Article  Google Scholar 

  • Olden, J. D., M. J. Kennard & B. J. Pusey, 2008. Species invasions and the changing biogeography of Australian freshwater fishes. Global Ecology and Biogeography 17: 25–37.

    Google Scholar 

  • Olden, J. D., M. J. Kennard, F. Leprieur, P. A. Tedesco, K. O. Winemiller & E. García-Berthou, 2010. Conservation biogeography of freshwater fishes: recent progress and future challenges. Diversity and Distributions 16: 496–513.

    Article  Google Scholar 

  • Orendt, C., C. Schmitt, C. Liefferinge, G. Wolfram & E. Deckere, 2009. Include or exclude? A review on the role and suitability of aquatic invertebrate neozoa as indicators in biological assessment with special respect to fresh and brackish European waters. Biological Invasions 12: 265–283.

    Article  Google Scholar 

  • Palmer, M. A., A. P. Covich, S. Lake, P. Biro, J. J. Brooks, J. Cole, C. Dahm, J. Gilbert, W. Goedkoop, K. Martens, J. Verhoeven & W. J. van de Bund, 2000. Linkages between aquatic sediment biota and life above sediments as potential drivers of biodiversity and ecological processes. BioScience 50: 1062–1068.

    Article  Google Scholar 

  • Parris, K. M., 2006. Urban amphibian assemblages as metacommunities. Journal of Animal Ecology 75: 757–764.

    Article  PubMed  Google Scholar 

  • Passy, S. I., 2008. Continental diatom biodiversity in stream benthos declines as more nutrients become limiting. Proceedings of the National Academy of Sciences of the United States of America 105: 9663–9667.

    Article  PubMed  CAS  Google Scholar 

  • Passy, S. I., 2009. The relationship between local and regional diatom richness is mediated by the local and regional environment. Global Ecology and Biogeography 18: 383–391.

    Article  Google Scholar 

  • Pearce, D. A., C. S. Cockell, E. S. Lindström & L. J. L. J. Tranvik, 2007. First evidence for a bipolar distribution of dominant freshwater lake bacterioplankton. Antarctic Science 19: 245.

    Article  Google Scholar 

  • Pegg, M. A. & R. M. Taylor, 2007. Fish species diversity among spatial scales of altered temperate rivers. Journal of Biogeography 34: 549–558.

    Article  Google Scholar 

  • Peltzer, P. M. & R. C. Lajmanovich, 2004. Anuran tadpole assemblages in riparian areas of the Middle Parana River, Argentina. Biodiversity and Conservation 13: 1833–1842.

    Article  Google Scholar 

  • Piorski, N. M., A. Sanches, L. F. Carvalho-Costa, T. Hatanaka, M. Carrillo-Avila, P. D. Freitas & P. M. Galetti, 2008. Contribution of conservation genetics in assessing neotropical freshwater fish biodiversity. Brazilian Journal of Biology 68: 1039–1050.

    Article  CAS  Google Scholar 

  • Piscart, C., J.-C. Moreteau & J.-N. Beisel, 2006. Salinization consequences in running waters: use of a sentinel substrate as a bioassessment method. Journal of the North American Benthological Society 25: 477–486.

    Article  Google Scholar 

  • Pithart, D., R. Pichlová, M. Bílý, J. Hrbáček, K. Novotná & L. Pechar, 2007. Spatial and temporal diversity of small shallow waters in river Lužnice floodplain. Hydrobiologia 584: 265–275.

    Article  CAS  Google Scholar 

  • Poff, N. L., 1997. Landscape filters and species traits: towards mechanistic understanding and prediction in stream ecology. Journal of the North American Benthological Society 16: 391–409.

    Google Scholar 

  • Potapova, M. G. & D. F. Charles, 2002. Benthic diatoms in USA rivers: distributions along spatial and environmental gradients. Journal of Biogeography 29: 167–187.

    Article  Google Scholar 

  • Potthoff, A. J., B. R. Herwig, M. A. Hanson, K. D. Zimmer, M. G. Butler, J. R. Reed, B. G. Parsons & M. C. Ward, 2008. Cascading food-web effects of piscivore introductions in shallow lakes. Journal of Applied Ecology 45: 1170–1179.

    Google Scholar 

  • Preston, F. W., 1962. The canonical distribution of commonness and rarity: Part I. Ecology 43: 185–215.

    Article  Google Scholar 

  • Pronk, M., N. Goldscheider & J. Zopfi, 2008. Microbial communities in karst groundwater and their potential use for biomonitoring. Hydrogeology Journal 17: 37–48.

    Article  Google Scholar 

  • Ptacnik, R., A. G. Solimini, T. Andersen, T. Tamminen, P. Brettum, L. Lepistö, E. Willén & S. Rekolainen, 2008. Diversity predicts stability and resource use efficiency in natural phytoplankton communities. Proceedings of the National Academy of Sciences of the United States of America 105: 5134–5138.

    Article  PubMed  CAS  Google Scholar 

  • Rahel, F. J., 2002. Homogenization of freshwater faunas. Annual Review of Ecology and Systematics 33: 291–315.

    Article  Google Scholar 

  • Ramos-Jiliberto, R., J. P. Oyanedel, C. Vega-Retter & F. S. Valdovinos, 2009. Nested structure of plankton communities from Chilean freshwaters. Limnologica - Ecology and Management of Inland Waters 39: 319–324.

    Article  Google Scholar 

  • Rayner, T. S., K. M. Jenkins & R. T. Kingsford, 2009. Small environmental flows, drought and the role of refugia for freshwater fish in the Macquarie Marshes, arid Australia. Ecohydrology 2: 440–453.

    Article  Google Scholar 

  • Real, R., J. Olivero & J. M. Vargas, 2008. Using chorotypes to deconstruct biogeographical and biodiversity patterns: the case of breeding waterbirds in Europe. Global Ecology and Biogeography 17: 735–746.

    Article  Google Scholar 

  • Reed, D. A., S. Toze & B. Chang, 2008. Spatial and temporal changes in sulphate-reducing groundwater bacterial community structure in response to Managed Aquifer Recharge. Water Science and Technology 57: 789–795.

    Article  PubMed  CAS  Google Scholar 

  • Reeves, J. M., P. Deckker & S. A. Halse, 2007. Groundwater Ostracods from the arid Pilbara region of northwestern Australia: distribution and water chemistry. Hydrobiologia 585: 99–118.

    Article  CAS  Google Scholar 

  • Remsburg, A. J. & M. G. Turner, 2009. Aquatic and terrestrial drivers of dragonfly Odonata assemblages within and among north-temperate lakes. Journal of the North American Benthological Society 28: 44–56.

    Article  Google Scholar 

  • Renöfält, B. M., R. Jansson & C. Nilsson, 2010. Effects of hydropower generation and opportunities for environmental flow management in Swedish riverine ecosystems. Freshwater Biology 55: 49–67.

    Article  Google Scholar 

  • Richardson, D. M., P. M. Holmes, K. J. Esler, S. M. Galatowitsch, J. C. Stromberg, S. P. Kirkman, P. Pysek & R. J. Hobbs, 2007. Riparian vegetation: degradation, alien plant invasions, and restoration prospects. Diversity and Distributions 13: 126–139.

    Article  Google Scholar 

  • Ricklefs, R. E., 2004. A comprehensive framework for global patterns in biodiversity. Ecology Letters 7: 1–15.

    Article  Google Scholar 

  • Ricklefs, R. E. & D. Schluter, 1993. Species Diversity in Ecological Communities. Historical and Geographical Perspectives. Chicago University Press, Chicago.

    Google Scholar 

  • Rohde, S., M. Hostmann, A. Peter & K. Ewald, 2006. Room for rivers: an integrative search strategy for floodplain restoration. Landscape and Urban Planning 78: 50–70.

    Article  Google Scholar 

  • Romanenko, V. D., S. A. Afanasyev & O. G. Vasenko, 2005. Review of status of fisheries and Aquaculture in the Dnipro region in relation to biodiversity conservation. Water Quality Research Journal of Canada 40: 42–53.

    Google Scholar 

  • Roque, F. O., T. Siqueira, L. M. Bini, M. C. Ribeiro, L. R. Tambosi, G. Ciocheti & Trivinho-S Strixino, 2010. Untangling associations between chironomid taxa in Neotropical streams using local and landscape filters. Freshwater Biology 55: 847–865.

    Article  Google Scholar 

  • Rundle, S. D., D. T. Bilton & D. K. Shiozawa, 2000. Global and regional patterns in lotic meiofauna. Freshwater Biology 44: 123–134.

    Article  Google Scholar 

  • Rusak, J. A., P. R. Leavitt, S. McGowan, G. Chen, O. Olson, S. Wunsam & B. F. Cumming, 2004. Millennial-scale relationships of diatom species richness and production in two prairie lakes. Limnology and Oceanography 49: 1290–1299.

    Article  Google Scholar 

  • Ryberg, W. A. & J. M. Chase, 2007. Predator-dependent species–area relationships. The American Naturalist 170: 636–642.

    Article  PubMed  Google Scholar 

  • SAS, 2010. JMP-Statistics made visual, 3.1. SAS Institute Inc., Cary, North Carolina.

  • Schweiger, O., J. C. Biesmeijer, R. Bommarco, T. Hickler, P. E. Hulme, S. Klotz, I. Kühn, M. Moora, A. Nielsen, R. Ohlemüller, T. Petanidou, S. G. Potts, P. Pysek, J. C. Stout, M. T. Sykes, T. Tscheulin, M. Vilà, W. Gian-Reto, C. Westphal, M. Winter, M. Zobel & J. Settele, 2010. Multiple stressors on biotic interactions: how climate change and alien species interact to affect pollination. Biological Reviews 85: 777–795.

    PubMed  Google Scholar 

  • Shabarova, T. & J. Pernthaler, 2010. Karst pools in subsurface environments: collectors of microbial diversity or temporary residence between habitat types. Environmental Microbiology 12: 1061–1074.

    Article  PubMed  CAS  Google Scholar 

  • Shoup, D. E. & D. H. Wahl, 2009. Fish diversity and abundance in relation to interannual and lake-specific variation in abiotic characteristics of floodplain lakes of the lower Kaskaskia River, Illinois. Transactions of the American Fisheries Society 138: 1076–1092.

    Article  Google Scholar 

  • Shurin, J. B., 2000. Dispersal limitation, invasion resistance, and the structure of pond zooplankton communities. Ecology 81: 3074–3086.

    Article  Google Scholar 

  • Shurin, J. B., S. E. Arnott, H. Hillebrand, A. Longmuir, B. Pinel-Alloul, M. Winder & N. D. Yan, 2007. Diversity–stability relationship varies with latitude in zooplankton. Ecology Letters 10: 127–134.

    Article  PubMed  Google Scholar 

  • Shurin, J. B., K. Cottenie & H. Hillebrand, 2009. Spatial autocorrelation and dispersal limitation in freshwater organisms. Oecologia 159: 151–159.

    Article  PubMed  Google Scholar 

  • Shurin, J. B., J. E. Havel, M. A. Leibold & B. Pinel-Alloul, 2010a. Local and regional zooplankton species richness: a scale-independent test for saturation. Ecology 81: 3062–3073.

    Article  Google Scholar 

  • Shurin, J. B., M. Winder, R. Adrian, W. B. Keller, B. Matthews, A. M. Paterson, M. J. Paterson, B. Pinel-Alloul, J. A. Rusak & N. D. Yan, 2010b. Environmental stability and lake zooplankton diversity—contrasting effects of chemical and thermal variability. Ecology Letters 13: 453–463.

    Article  PubMed  Google Scholar 

  • Smith, H. & P. J. Wood, 2002. Flow permanence and macroinvertebrate community variability in limestone spring systems. Hydrobiologia 487: 45–58.

    Article  Google Scholar 

  • Smith, V. H., B. L. Foster, J. P. Grover, R. D. Holt, M. A. Leibold & F. Denoyelles, 2005. Phytoplankton species richness scales consistently from laboratory microcosms to the world’s oceans. Proceedings of the National Academy of Sciences of the United States of America 102: 4393–4396.

    Article  PubMed  CAS  Google Scholar 

  • Soininen, J., M. Kokocinski, S. Estlander, J. Kotanen & J. Heino, 2007. Neutrality, niches, and determinants of plankton metacommunity structure across boreal wetland ponds. EcoScience 14: 146–154.

    Article  Google Scholar 

  • Soininen, J., J. Heino, M. Kokocinski & T. Muotka, 2009. Local-regional diversity relationship varies with spatial scale in lotic diatoms. Journal of Biogeography 36: 720–727.

    Article  Google Scholar 

  • Solimini, A. G., M. Bazzanti, A. Ruggiero & G. Carchini, 2008. Developing a multimetric index of ecological integrity based on macroinvertebrates of mountain ponds in central Italy. Hydrobiologia 597: 109–123.

    Article  Google Scholar 

  • Søndergaard, M., L. S. Johansson, T. L. Lauridsen, T. B. Jørgensen, L. Liboriussen & E. Jeppesen, 2010. Submerged macrophytes as indicators of the ecological quality of lakes. Freshwater Biology 55: 893–908.

    Article  Google Scholar 

  • Statzner, B., 2001. Perspectives for biomonitoring at large spatial scales: a unified measure for the functional composition of invertebrate communities in European running waters. Basic and Applied Ecology 2: 73–85.

    Article  Google Scholar 

  • Stein, H., C. Kellermann, S. I. Schmidt, H. Brielmann, C. Steube, S. E. Berkhoff, A. Fuchs, H. J. Hahn, B. Thulin & C. Griebler, 2010. The potential use of fauna and bacteria as ecological indicators for the assessment of groundwater quality. Journal of Environmental Monitoring 12: 242–254.

    Article  PubMed  CAS  Google Scholar 

  • Stendera, S. E. S. & R. K. Johnson, 2005. Additive partitioning of aquatic invertebrate species diversity across multiple spatial scales. Freshwater Biology 50: 1360–1375.

    Article  Google Scholar 

  • Stenert, C. & L. Maltchik, 2007. Influence of area, altitude and hydroperiod on macroinvertebrate communities in southern Brazil wetlands. Marine and Freshwater Research 58: 993.

    Article  Google Scholar 

  • Stoch, F., M. Artheau, A. Brancelj, D. M. P. Galassi & F. Malard, 2009. Biodiversity indicators in European ground waters: towards a predictive model of stygobiotic species richness. Freshwater Biology 54: 745–755.

    Article  Google Scholar 

  • Stoks, R. & M. A. McPeek, 2003. Predators and life histories shape Lestes damselfly assemblages along a freshwater habitat gradient. Ecology 84: 1576–1587.

    Article  Google Scholar 

  • Storey, R. G. & D. D. Williams, 2004. Spatial responses of hyporheic invertebrates to seasonal changes in environmental parameters. Freshwater Biology 49: 1468–1486.

    Article  Google Scholar 

  • Studinski, J. M. & S. A. Grubbs, 2006. Environmental factors affecting the distribution of aquatic invertebrates in temporary ponds in Mammoth Cave National Park, Kentucky, USA. Hydrobiologia 575: 211–220.

    Article  Google Scholar 

  • Sullivan, G., J. C. Callaway & J. B. Zedler, 2007. Plant assemblage composition explains and predicts how biodiversity affects salt marsh functioning. Ecological Monographs 77: 569–590.

    Article  Google Scholar 

  • Tabacchi, E., J. Steiger, D. Corenblit, M. T. Monaghan & A.-M. Planty-Tabacchi, 2009. Implications of biological and physical diversity for resilience and resistance patterns within highly dynamic river systems. Aquatic Sciences 71: 279–289.

    Article  Google Scholar 

  • Taft, O. W., M. A. Colwell, C. R. Isola & R. J. Safran, 2002. Waterbird responses to experimental drawdown: implications for the multispecies management of wetland mosaics. Journal of Applied Ecology 39: 987–1001.

    Article  Google Scholar 

  • Takai, K., M. R. Mormile, J. P. McKinley, F. J. Brockman, W. E. Holben, W. P. Kovacik & J. K. Fredrickson, 2003. Shifts in archaeal communities associated with lithological and geochemical variations in subsurface Cretaceous rock. Environmental Microbiology 5: 309–320.

    Article  PubMed  CAS  Google Scholar 

  • Ter Braak C. J. & F. P. Smilauer, 1997–1998. GLW-CPRO. Canoco for Windows, 4.0. Wageningen, The Netherlands: Centre for Biometry Wageningen CPRO-DLO.

  • Tolotti, M., M. Manca, N. Angeli, G. Morabito, B. Thaler, E. Rott & E. Stuchlik, 2006. Phytoplankton and zooplankton associations in a set of Alpine High Altitude Lakes: geographic distribution and ecology. Hydrobiologia 562: 99–122.

    Article  CAS  Google Scholar 

  • Turvey, S. T., L. A. Barrett, H. Yujiang, Z. Lei, Z. Xinqiao, W. Xianyan, H. Yadong, Z. Kaiya, T. Hart & W. Ding, 2010. Rapidly shifting baselines in Yangtze fishing communities and local memory of extinct species. Conservation Biology 24: 778–787.

    Article  PubMed  Google Scholar 

  • Tyser, R. W., S. J. Rogers, T. W. Owens & L. R. Robinson, 2001. Changes in backwater plant communities from 1975 to 1995 in Navigation Pool 8: Upper Mississippi River. Regulated Rivers: Research & Management 17: 117–129.

    Article  Google Scholar 

  • Uchida, Y. & M. Inoue, 2010. Fish species richness in spring-fed ponds: effects of habitat size versus isolation in temporally variable environments. Freshwater Biology 55: 983–994.

    Article  Google Scholar 

  • Urban, M. C., 2004. Disturbance heterogeneity determines freshwater metacommunity structure. Ecology 85: 2971–2978.

    Article  Google Scholar 

  • Van De Meutter, F., R. Stoks & L. De Meester, 2006. Rapid response of macroinvertebrates to drainage management of shallow connected lakes. Journal of Applied Ecology 43: 51–60.

    Article  Google Scholar 

  • Venterink, H., M. J. Wassen, A. W. M. Verkroost & P. C. De Ruiter, 2003. Species richness–productivity patterns differ between N-, P-, and K-limited wetlands. Ecology 84: 2191–2199.

    Article  Google Scholar 

  • Verleyen, E., W. Vyverman, M. Sterken, D. A. Hodgson, A. De Wever, S. Juggins, B. Van de Vijver, V. J. Jones, P. Vanormelingen, D. Roberts, R. Flower, C. Kilroy, C. Souffreau & K. Sabbe, 2009. The importance of dispersal related and local factors in shaping the taxonomic structure of diatom metacommunities. Oikos 118: 1239–1249.

    Article  Google Scholar 

  • Vinson, M. R. & C. P. Hawkins, 1998. Biodiversity of stream insects: variation at local, basin, and regional scales. Annual Review of Entomology 43: 271–293.

    Article  PubMed  CAS  Google Scholar 

  • Virola, T., V. Kaitala, A. Lammi, P. Siikamaki & J. Suhonen, 2001. Geographical patterns of species turnover in aquatic plant communities. Freshwater Biology 46: 1471–1478.

    Article  Google Scholar 

  • Vörösmarty, C. J., P. B. McIntyre, M. O. Gessner, D. Dudgeon, A. Prusevich, P. Green, S. Glidden, S. E. Bunn, C. A. Sullivan, C. Reidy Liermann & P. M. Davies, 2010. Global threats to human water security and river biodiversity. Nature 467: 555–561.

    Article  PubMed  CAS  Google Scholar 

  • Wagner, R. & H. Schmidt, 2004. Yearly discharge patterns determine species abundance and community diversity: analysis of a 25 year record from the Breitenbach. Archiv für Hydrobiologie 161: 511–540.

    Article  Google Scholar 

  • Walker, S. C. & H. Cyr, 2007. Testing the standard neutral model of biodiversity in lake communities. Oikos 116: 143–155.

    Article  Google Scholar 

  • Ward, J. V. & K. Tockner, 2001. Biodiversity: towards a unifying theme for river ecology. Freshwater Biology 46: 807–819.

    Article  Google Scholar 

  • Warner, B. G. & T. Asada, 2006. Biological diversity of peatlands in Canada. Aquatic Sciences 68: 240–253.

    Article  Google Scholar 

  • Waterkeyn, A., P. Grillas, B. Vanschoenwinkel & L. Brendonck, 2008. Invertebrate community patterns in Mediterranean temporary wetlands along hydroperiod and salinity gradients. Freshwater Biology 53: 1808–1822.

    Article  CAS  Google Scholar 

  • Weckström, J. & A. Korhola, 2008. Patterns in the distribution, composition and diversity of diatom assemblages in relation to ecoclimatic factors in Arctic Lapland. Journal of Biogeography 28: 31–45.

    Article  Google Scholar 

  • Weithoff, G., 2001. The intermediate disturbance hypothesis—species diversity or functional diversity? Journal of Plankton Research 23: 1147–1155.

    Article  Google Scholar 

  • Wetzel, G., 1963. Primary productivity in lakes. Nature 197: 1026–1028.

    Article  Google Scholar 

  • Whitehouse, N. J., P. G. Langdon, R. Bustin & S. Galsworthy, 2008. Fossil insects and ecosystem dynamics in wetlands: implications for biodiversity and conservation. Biodiversity and Conservation 17: 2055–2078.

    Article  Google Scholar 

  • Wilcox, D. A. & S. J. Nichols, 2008. The effects of water-level fluctuations on vegetation in a Lake Huron wetland. Wetlands 28: 487–501.

    Article  Google Scholar 

  • Wolters, M., A. Garbutt & J. Bakker, 2005. Salt-marsh restoration: evaluating the success of de-embankments in north-west Europe. Biological Conservation 123: 249–268.

    Article  Google Scholar 

  • Wood, P., J. Gunn & S. Rundle, 2008. Response of benthic cave invertebrates to organic pollution events. Aquatic Conservation: Marine and Freshwater Ecosystems 922: 909–922.

    Article  Google Scholar 

  • Wright, D. H., 1983. Species–energy theory: an extension of species-area theory. Oikos 41: 496–506.

    Article  Google Scholar 

  • Zhao, S., J. Fang, C. Peng & Z. Tang, 2006. Patterns of fish species richness in China’s lakes. Global Ecology and Biogeography 15: 386–394.

    Article  Google Scholar 

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Acknowledgments

The authors would like to thank Mark Gessner providing valuable comments and Pablo Verde for helping in processing the literature on lakes. We also appreciate anonymous reviewers for constructive comments on the manuscript draft. This study is part of the BioFresh project (Biodiversity of Freshwater Ecosystems: Status, Trends, Pressures, and Conservation Priorities), funded by the European Union under the 7th Framework Programme, Theme 6 (Environment including Climate Change), Contract No. 226874.

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Correspondence to Sonja Stendera.

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Stendera, S., Adrian, R., Bonada, N. et al. Drivers and stressors of freshwater biodiversity patterns across different ecosystems and scales: a review. Hydrobiologia 696, 1–28 (2012). https://doi.org/10.1007/s10750-012-1183-0

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