, Volume 663, Issue 1, pp 187–203 | Cite as

Morphological, biochemical and molecular characterization of Anabaena, Aphanizomenon and Nostoc strains (Cyanobacteria, Nostocales) isolated from Portuguese freshwater habitats

  • Victor GalhanoEmail author
  • Daniela R. de Figueiredo
  • Artur Alves
  • António Correia
  • Mário J. Pereira
  • José Gomes-Laranjo
  • Francisco Peixoto
Primary research paper


Studies of cyanobacterial nostocacean taxa are important to the global scientific community, mainly because a significant number of beneficial strains that belong to the order Nostocales fix atmospheric nitrogen, thus contributing to the fertility of agricultural soils worldwide, while others behave as nuisance microorganisms in aquatic ecosystems due to their involvement in toxic bloom events. However, in spite of their ecological importance and environmental concerns, their identification and taxonomy are still problematic and doubtful, often being based on current morphological and physiological studies, which generate confusing classification systems and usually vary under different conditions. Therefore, the present research aimed to investigate through a polyphasic approach differences in morphological, biochemical and genotypic features of three nostocacean cyanobacterial strains isolated from central-western Portuguese shallow freshwater bodies. Morphometric, genetic (16S rRNA, nifH and hetR fragments) and biochemical (fatty acid methyl ester; FAME profiles) data were used to characterize the strains. Morphological analysis and sequencing of 16S rRNA fragments showed that the strains belonged to Anabaena cylindrica (UTAD_A212), Aphanizomenon gracile (UADFA16) and Nostoc muscorum (UTAD_N213) species. These strains showed clear distinct morphological and genetic features, allowing easy allocation to their respective genera. The same happened by using partial sequences of hetR and nifH genes, in spite of the scarcity of deposited sequences. Biochemical characterization showed that the FAME profiles obtained were consistent with both morphological and molecular analyses. It was suggested that the ratio of monounsaturated to polyunsaturated FAMEs, together with the unsaturation index, could be used as genus-specific chemotaxonomic biomarkers.


Polyphasic taxonomy Cyanobacteria 16S rRNA hetR nifH Fatty acid methyl esters 



This study was supported by PhD grants to Victor Galhano (SFRH/BD/17582/2004) and Daniela de Figueiredo (SFRH/BD/23864/2005) of Portuguese Science and Technology Foundation (FCT), Ministry of Science, Technology and Higher Education, Portuguese Government. The authors are indebted to Prof. Fernando Nunes (Chemistry Department, UTAD, Vila Real) for instrumental laboratory facilities on lipid analysis and to Dr. Fátima Santos (Botany Department, FCTUC, Coimbra) for her kind help on morphological identification and loan of precious historical publications. Further, we are thankful to Prof. Luigi Naselli-Flores (Department of Botanical Sciences, University of Palermo, Palermo, Italy) and to the anonymous reviewer for their constructive and helpful comments on the manuscript.


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Copyright information

© Springer Science+Business Media B.V. 2010

Authors and Affiliations

  • Victor Galhano
    • 1
    Email author
  • Daniela R. de Figueiredo
    • 2
  • Artur Alves
    • 2
  • António Correia
    • 2
  • Mário J. Pereira
    • 2
  • José Gomes-Laranjo
    • 1
  • Francisco Peixoto
    • 3
  1. 1.Department of Biology and Environment, CITAB—Centre for Research and Technology of Agro-Environment and Biological Sciences, Sustainable Agro-Food Chains Research GroupUniversity of Trás-os-Montes and Alto DouroVila RealPortugal
  2. 2.Department of Biology, CESAM—Centre for Environmental and Marine StudiesUniversity of AveiroAveiroPortugal
  3. 3.Department of Chemistry, CECAV—Centre of Animal Sciences and VeterinaryUniversity of Trás-os-Montes and Alto DouroVila RealPortugal

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