Abstract
Anastrepha striata is widely distributed across the Americas and is a pest of economically important crops, especially crops of the Myrtaceae family. Insect population structures can be influenced by the presence of physical barriers or characteristics associated with habitat differences. This study evaluated the effect of the Western Andes on the population structure of A. striata. Individuals were collected from Psidium guajava fruits from three natural regions of southwestern Colombia (Pacific Coast, mountainous region and the inter-Andean valley of the Cauca River). Based on a 1318 bp concatenated of the genes Cytochrome Oxidase subunit I (COI) and NADH dehydrogenase subunit 6 (ND6), 14 haplotypes with few changes among them (between 1 and 3) were found. There was only one dominant haplotype in all three regions. No genetic structure associated with the three eco-geographical regions of the study was found. Moreover, the Western Andes are not an effective barrier for the genetic isolation of the populations from the Pacific Coast compared with the inter-Andean valley populations. This genetic homogeneity could be partially due to anthropogenic intervention, which acts as a dispersal agent of infested fruits. Another hypothesis to explain the lack of structure would be the relatively recent arrival of A. striata to the region, as indicated by an analysis of the demographic history, which reveals a process of population expansion. This study represents the first attempt to understand the population genetics of A. striata in Colombia and could contribute to the integral management of this pest.
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References
Agelopoulos N, Birkett MA, Hick AJ, Hooper AM, Pickett JA, Pow EM, Smart LE, Smiley DW, Wadhams LJ, Woodcock CM (1999) Exploiting semiochemicals in insect control. J Pestic Sci 55:225–235
Aketarawong N, Chinvinijkul S, Orankanok W (2011) The utility of microsatellite DNA markers for the evaluation of area-wide integrated pest management using SIT for the fruit fly, Bactrocera dorsalis (Hendel), control programs in Thailand. Genetica 139:129–140
Aluja M, Jácome M, Birke A, Lozada N, Quintero G (1993) Patterns of Behavior in Wild Anastrepha striata (Diptera: Tephritidae) Flies under Field-Cage Conditions. Ann Entomol Soc Am 86:776–793
Aluja M, Piñero J, López M, Ruíz C, Zúñiga A, Piedra E, Díaz-Fleischer F, Sivinski J (2000) New host plant and distribution records in Mexico for Anastrepha spp., Toxotrypana curvicauda Gerstacker, Rhagoletis zoqui Bush, Rhagoletis sp., and Hexachaeta sp. (Diptera: Tephritidae). Proc Entomol Soc Wash 102:802–815
Arévalo P, Restrepo A, Areiza G (1997) Las moscas de las frutas del género Anastrepha Schiner (Diptera: Tephritidae) en el departamento de Antioquia (Colombia). Aconteceres Entomológicos 271–282
Avise JC (1994) Molecular markers, natural history and evolution. Chapman & Hall, New York
Avise JC (2000) Phylogeography: the history and formation of species. Harvard University Press, Cambridge
Barr NB, Copeland RS, Meyer M, Masiga D, Kibogo HG, Billah MK, Osir E, Wharton RA, McPheron BA (2006) Molecular diagnostics of economically important Ceratitis fruit fly species (Diptera: Tephritidae) in Africa using PCR and RFLP analyses. Bull Entomol Res 96:505–521
Brower AVZ (1994) Rapid morphological radiation and convergence among races of the butterfly Heliconius erato, inferred from patterns of mitochondrial DNA evolution. Proc Natl Acad Sci USA 91:6491–6495
Brown WM, George M, Wilson AC (1979) Rapid evolution of animal mitochondrial DNA. PNAS 76:1967–1971
Caraballo J (2001) Diagnosis y clave pictórica para las especies del género Anastrepha Schiner, 1986 (Diptera: Tephritidae) de importancia económica en Venezuela. Entomotrópica 16(3):157–164
Carrejo N, González R (1994) Lista preliminar de las moscas de la fruta del género Anastrepha (Dip.: Tephritidae) en el departamento del Valle del Cauca Cali, Colombia, Boletín del Museo de Entomología de la Universidad del Valle 2(1):85–93
Castañeda M, Osorio A, Canal N, Galeano P (2010) Especies, distribución y hospederos del género Anastrepha Schiner en el departamento del Tolima, Colombia. Agron Colomb 28(2): 265–271
Cruz-López L, Malo E, Rojas J (2015) Sex Pheromone of Anastrepha striata. J Chem Ecol 41:458–464
Díaz AE, Suarez HG, Gallego G, Saldamando CI, Tohme J (2013) Geographic differentiation of Colombian Neulocinodes elegantalis (Lepidoptera: Crambidae) haplotypes: evidence for Solanaceae host plant association and Holdridge life zone for genetic differentiation. Ann Entomol Soc Am 106:586–597
Elias M, Joron M, Willmott K, Silva-Brandão KL, Kaiser V, Arias CF, Gomez Piñerez LM, Uribe S, Brower AV, Freitas AV, Jiggins CD (2009) Out of the Andes: patterns of diversification in clearwing butterflies. Mol Ecol 18:1716–1729
Excoffier L, Lischer H (2010) Arlequín suite ver 3.5: a new series of programs to perform population genetics analyses under linux and windows. Mol Ecol Resour 10(3):564–567
Folmer O, Black M, Hoeh W, Lutz R, Vrijenhoek R (1994) DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol Marine Biol Biotechnol 3(5):294–299
Fu YX (1997) Statistical test of neutrality of mutations against population growth, hitch hiking and background selection. Genetics 147:915–925
Gasperi G, Bonizzoni M, Gomulski LM, Murelli V, Torti C, Malacrida AR, Guglielmino CR (2002) Genetic differentiation, gene flow and the origin of infestations of the medfly, Ceratitis capitata. Genetica 116:125–135
Graham A, Gregory-Wodzicki KM, Wright KL (2001) Studies in Neotropical botany. XV. A Mio-Pliocene palynoflora from the Eastern Cordillera, Bolivia: implications for the uplift history of the Central Andes. Am J Bot 88:1545–1557
Harpending HC (1994) Signature of ancient population growth in a low-resolution mitochondrial DNA mismatch distribution. Hum Biol 6:591–600
Hebert PDN, Cywinska A, Ball SL, Dewaard JR (2003) Biological identifications through DNA barcodes. Proc Roy Soc Ser B 270:313–321
Hernández E, Orozco D, Flores-Breceda S, Domínguez J (2007) Dispersal and longevity of wild and mass-reared Anastrepha ludens and Anastrepha obliqua (Diptera: Tephritidae). Flo Entomol 90:123–135
Hernández-Ortiz V, Aluja M (1993) Listado de especies del género neotropical Anastrepha (Diptera: Tephritidae) con notas sobre su distribución y plantas hospederas. Folia Entomol 88:89–105
Hernández-Ortiz V, Morales-Valles P (2004) Distribución geográfica y plantas hospederas de Anastrepha fraterculus (Díptera: Tephritidae) en Venezuela. Folia Entomol Mex 43:181–189
Hernández-Ortiz V, Bartolucci F, Morales-Valles P, Frías D, Selivon D (2012) Cryptic species of the Anastrepha fraterculus complex (Diptera: Tephritidae): a multivariate approach for the recognition of South American morphotypes. Ann Entomol Soc Am 105:305–318
Hill DS (2008) Pests of crops in warmer climates and their control. Springer, Dordrecht
Hu J, Zhang JL, Nardi F, Zhang RJ (2008) Population genetic structure of the melon fly, Bactrocera cucurbitae (Diptera: Tephritidae), from China and Southeast Asia. Genetica 134:319–324
Insuasty O, Cuadros J, Monroy R, Bautista J (2007) Manejo Integrado de Moscas de la Fruta de la Guayaba (Anastrepha spp.). Boletín técnico. Publicación CORPOICA. Bogotá
Jensen JL, Bohonak AJ, Kelley ST (2005) Isolation by distance, web service. BMC Genetics 6:13. v.3.23, disponible en: http://ibdws.sdsu.edu/
Karsten M, Vanvuuren BJ, Barnaud A, Terblanche JS (2013) Population genetics of Ceratitis capitata in South Africa: implications for dispersal and pest management. Plos One 8:e54281
Karsten M, Vanvuuren BJ, Addison P, Terblanche JS (2015) Deconstructing intercontinental invasion pathway hypotheses of the Mediterranean fruit fly (Ceratitis capitata) using a Bayesian inference approach: are port interceptions and quarantine protocols successfully preventing new invasions? Divers Distrib 21:813–825
Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, Valentin F, Wallace IM, Wilm A, Lopez R, Thompson JD, Gibson TJ, Higgins DG (2007) Clustal W and Clustal X version 2.0″. Bioinformatics 23:2947–2948
Liebhold AM, Yamanaka T, Roques A, Augustin S, Chown SL, Brockerhoff EG, Pyšek P (2016) Global compositional variation among native and non-native regional insect assemblages emphasizes the importance of pathways. Biol invasion 18(4):893–905
Luo A, Lan H, Ling C, Zhang A, Shi L, Ho SYW, Zhu C (2015) A simulation study of sample size for DNA barcoding. Ecol Evol 5(24):5869–5879
Lynch JD, Duellman WE (1997) Frogs of the genus Eleutherodactylus (Leptodactylidae) in western Ecuador: systematics, ecology, and biogeography. Univ. Kansas Spec. Publ. No. 23. Univ. of Kansas Printing Service, Lawrence
Malacrida AR, Gomulski LM, Bonizzoni M, Bertin S, Gasperi G, Guglielmino CR (2007) Globalization and fruitfly invasion and expansion: the medfly paradigm. Genetica 131:1–9
Malavasi A, Morganti JS (1980) Biología da moscas-frutas (DIP: Tephritidae). II. Indices de infestacao em diferentes hospedeiros e localidades. Rev Bras Biol 40(1):17–24
Mantel N (1967) The detection of disease clustering and a generalized regression approach. Cancer Res 27:209–220
Martínez A, Serna JS (2005) Identificación y localización geográfica de especies de Anastrepha (Diptera: Tephritidae) en Cundinamarca (Colombia). Agron Colomb 23(1):102–111
Meeyen K, Nanorksopaldawan P, Pramual P (2014) Population structure, population history and DNA barcoding of fruit fly Bactrocera latifrons (Hendel) (Diptera: Tephritidae). Entomol Sci 17:219–230
Morgan K, O’Loughlin SM, Chen B, Linton YM, Thongwat D, Somboon P, Fong MY, Butlin R, Verity R, Prakash A, Htun PT, Hlaing T, Nambanya S, Socheat D, Dinh TH, Walton C (2011) Comparative phylogeography reveals a shared impact of Pleistocene environmental change in shaping genetic diversity within nine Anopheles mosquito species across the Indo–Burma biodiversity hotspot. Mol Ecol 20:4533–4549
Mun J, Bohonak AJ, Roderick GK (2003) Population structure of the pumpkin fruit fly Bactrocera depressa (Tephritidae) in korea and Janpan: Pliocene allopatry or recent invasion? Mol Ecol 12:2941–2951
Norrbom AL (2003) Anastrepha striata (Schiner). The Diptera site. Fruit flies (Diptera:Tephritidae) Databases. Systematic Entomology Laboratory, ARS, USDA. Department of Entomology, NMNH, SI. Disponible en: http://www.sel.barc.usda.gov/diptera/tephriti/Anastrep/striata.htm. Accesed 13 August 2015
Norrbom AL, Carroll LE, Thompson FC, White IM, Freidberg A (1999) Systematic database of names. In: Thompson F. C. (Ed.), Fruit fly expert identification system and systematic information database. Myia (1998) 9, and Diptera Data Dissemination Disk (CD-ROM) (1998) 1:65–251
Núñez L (2010) Contribución al reconocimiento de las moscas de las frutas (Diptera:Tephriridae) en Colombia. Revista del Instituto Colombiano de Agropecuaria 16:173–179
Núñez L, Gómez R, Guarín G, León G (2004) Moscas de las frutas (Díptera: Tephritidae) y parasitoides asociados con Psidium guajava L. y Coffea arabica L. en tres municipios de la Provincia de Vélez (Santander, Colombia) Parte 1: Índices de infestación y daño por moscas de las frutas (Díptera: Tephritidae). Revista Corpoica 51:5–12
Olarte W (1980) Dinámica poblacional del complejo constituido por las moscas de las frutasAnastrepha striataSch. Anastrepha fraterculusWied. En el medio ecológico del sur de Santander. Editorial, Fondo rotatorio de la Imprenta del Departamento de Santander. Universidad industrial de Santander.
Orozco C (2003) Ordenamiento territorial y medio ambiente, Incidencias de las normas jurídicas, Valle del Cauca 1990–1998. Unidad de Artes Gráficas de la Facultad de Humanidades, Universidad del Valle. Cali. CO. pp 153–154.
Penny D (2001) A 40,000 year palynological record from northeast Thailand, implications for biogeography and palaeoenvironmental reconstruction. Palaeogeogr Palaeoclimatol Palaeoecol 171:97–128
Prabhakar CS, Mehta PK, Sood P, Singh SK, Sharma P, Sharma PN (2012) Population genetic structure of the melón fly, Bactrocera cucurbitae (Coquillett) (Diptera: Tephritidae) based on mitochondrial cytochrome oxidase (COI) gene sequences. Genetica 140:83–91
Prabhakar CS, Sood P., Metha PK, Sharma PN (2013) Population genetic structure of the pumpkin fruit fly, Bactrocera tau (Walker) (Diptera: Tephritidae) in Himachal Pradesh, India. Biochem Syst Ecol 51:291–296
Ramírez A, Hernández-Ortiz V, Martínez I (1996) Maduración Ovárica en la mosca de la guayaba Anastrepha striata Schiner (Diptera: Tephritidae). Acta Zool Mex nueva serie (69):105–116
Roderick G, Navajas M (2003) Genes in new environments: genetics and evolution in biological control. Nat Rev Genet 4:889–899
Roger AR, Harpending H (1992) Population growth makes waves in the distribution of pairwise genetic differences. Mol Biol Evol 9:552–569
Rozas J, Librado P, Sánchez-Del Barrio JC, Messeguer X, Rozas R (2010) DnaSP Version 5 Help Contents [Help File]. Disponible en http://www.ub.edu/dnasp/
Ruiz F, Linton YM, Ponsonby DJ, Conn JE, Herrera M, Quiñones ML, Vélez ID, Wilkerson RC (2010) Molecular comparison of topotypic specimens confirms Anopheles (Nyssorhynchus) dunhami Causey (Diptera: Culicidae) in the Colombian Amazon. Mem Inst Oswaldo Cruz 105(7):899–903
Ruiz-Arce R, Barr NB, Owen CL, Thomas DB, McPheron BA (2012) Phylogeography of Anastrepha obliqua inferred with mtDNA sequencing. J Econ Entomol 105:2147–2160
Ruiz-Arce R, Owen CL, Thomas DB, Barr NB, McPheron BA (2015) Phylogeographic structure in Anastrepha ludens (Diptera: Tephritidae) populations inferred with mtDNA sequencing. J Econ Entomol. doi:10.1093/jee/tov082
Ruiz-Hurtado FM, Ramirez-Quimbayo JH, Rojas-Plazas B, Galeano-Olay PE, Canal N (2013) Diversidad de parasitoides (hymenoptera) de moscas frugívoras (díptera: tephritoidea) en dos áreas cafeteras del departamento del Tolima, Colombia. Revista Tumbaga. 2(8):29–53.
Salazar RMI, Gómez N, Vargas WG, Reyes M, Castillo LE, Bolívar W (2002) Bosques secos y muy secos del departamento del Valle del Cauca. Serie de Ecosistemas del Valle del Cauca. Corporación Autónoma Regional del Valle del Cauca CVC.
Selivon D, Perondini ALP, Morgante JS (2005) A genetic-morphological characterization of two cryptic species of the Anastrepha fraterculus complex. (Diptera: Tephritidae). Ann Entomol Soc Am 98:367–381
Shi W, Kerdelhue C, Ye H (2005) Population genetics of the oriental fruit fly, Bactrocera dorsalis (Diptera: Tephritidae), in Yunnan (China) Based on Mitochondrial DNA sequences. Environ Entomol 34:977–983
Shi W, Kerdelhue C, Ye H (2014) Genetic structure and colonization history of the fruit fly Bactrocera tau (Diptera: Tephritidae) in China and Southeast Asia. J Econ Entomol 107(3):1256–1265
Simon C, Frati F, Beckenbach A, Crespi B, Liu H, Flook P (1994) Evolution, weighting, and phylogenetic utility of mitochondrial gene sequences and a compilation of conserved polymerase chain reaction primers. Ann Entomol Soc Am 87:651–701
Slatkin M, Hudson RR (1991) Pairwise comparisons of mitocondrial DNA sequences in stable and exponentially growing populations. Genetics 129:555–562
Steyskal GC (1977) Pictorial key to species of the genus Anastrepha (Diptera: Tephritidae). Entomological Society of Washington press, Washington
Swanson R, Baranowski RW (1972) Host range and infestation by the Caribbean Fruit Fly Anastrepha suspensa (DIP: Tephritidae) In South Florida. Fla State Hortic Soc 85:271–274
Tajima F (1989) Statistical methods for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123:585–595
Tamura K, Stecher G, Peterson D, Filipski A, Kumar S (2013) MEGA 6: Molecular Evolutionary Genetics Analysis Version 6.0. Mol Biol Evol 30:2725–2729
Velasco-Cuervo SM, Espinosa L, Duque-Gamboa DN, Castillo-Cardenas MF, Hernández LM, Guzmán YC, Manzano MR, Toro-Perea N (2016) Barcoding, population structure, and demographic history of Prodiplosis longifila associated with the Andes. Entomol Exp Appl 158: 217–227
Xie L, Hong XY, Xue XF (2006) Population genetic structure of the twospotted spider mite (Acari: Tetranychidae) from China. Ann Entomol Soc Am 99:959–965
Acknowledgements
This research was funded by the Universidad del Valle through an internal call for proposals for the project “Códigos de Barras de especímenes frescos y de museo de la mosca de la fruta Anastrepha fraterculus y A. obliqua: Contribución al conocimiento de su historia demográfica y estructura poblacional en el Valle del Cauca”. We are grateful to Nelson Rivera of the human genetics research group at the Universidad del Valle for his technical assistance and contributions to the data analysis. We thank Maria del Rosario Castañeda and Mauricio Peñuela for their help improving this manuscript.
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Gallo-Franco, J.J., Velasco-Cuervo, S.M., Aguirre-Ramirez, E. et al. Genetic diversity and population structure of Anastrepha striata (Diptera: Tephritidae) in three natural regions of southwestern Colombia using mitochondrial sequences. Genetica 145, 79–89 (2017). https://doi.org/10.1007/s10709-016-9947-5
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DOI: https://doi.org/10.1007/s10709-016-9947-5