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Molecular cloning and bioinformatic characterization of Gonadotropin Inhibitory Hormone (GnIH) and its receptors in the freshwater murrel, Channa punctatus (Bloch, 1793)

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Abstract

Gonadotropin inhibitory hormone belonging to the RFamide peptide family, a hypothalamic neuropeptide, regulates Hypothalamus-pituitary–gonadal (HPG) axis and inhibits gonadal development. GnIH polypeptide precursor has an Arg-Phe-NH2 (RFamide) motif at the C-terminal, which has LPXRF (X = Q or L) domain. The actions of GnIH are mediated through G-protein coupled receptors and upto three receptors have been characterized in many teleosts. GnIH exerts its inhibitory effect on the HPG axis through direct interaction with GnRH and Kisspeptin neurons in the brain and acts directly on the pituitary gonadotrophs. To decipher the role of GnIH in Indian freshwater murrel, Channa punctatus, we sequenced the cDNA encoding GnIH and its two receptors. The identified GnIH mRNA encodes three RFamide peptides having -MPMRF, -MPQRF, and -LPQRFamide motifs. In silico analysis of the amino acid sequence of GnIH exhibits its molecular and functional properties and the protein–protein interaction with significant factors regulating the HPG axis. The 3-D structure of GnIH and its receptors, provides more relevant information about the active residues of these proteins which might be involved in their functioning and interaction with other proteins. Molecular dynamic simulation of GnIH protein has provided more insight into its dynamic behavior. The expression of GnIH and its receptors, shows an inverse correlation with gonadal development during the annual reproductive cycle.

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The datasets generated during and/or analysed during the current study are available from the corresponding authors on reasonable request.

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Acknowledgements

Ritu Narwal acknowledges the Department of Zoology, University of Delhi for providing the required infrastructural facilities and University Grant Commission (UGC) for the research fellowship.

Funding

This work was supported by Institute of Eminence (IoE), University of Delhi (Research grant Ref. No./IoE/2021/12/FRP, Dated: 29.10.2021.

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All authors contributed to the study's conception and design. Material preparation and data collection was performed by Ritu Narwal, and data analysis was performed by Ritu Narwal, Rishikesh Krishan Laxmi, Varunendra Singh Rawat and Neeta Sehgal. The first draft of the manuscript was written by Ritu Narwal and all authors commented on previous versions of the manuscript. All authors read and approved the final manuscript.

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Correspondence to Varunendra Singh Rawat or Neeta Sehgal.

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The fish were sampled and treated according to the procedures established by Institutional Animal Ethics Committee (IAEC) at University of Delhi under the Committee for the purpose of Control and Supervision of Experiments for Animals (CPCSEA) (file no. DU/ZOOL/IAEC-A/01/2019).

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Narwal, R., Laxmi, R.K., Rawat, V.S. et al. Molecular cloning and bioinformatic characterization of Gonadotropin Inhibitory Hormone (GnIH) and its receptors in the freshwater murrel, Channa punctatus (Bloch, 1793). Fish Physiol Biochem 49, 711–736 (2023). https://doi.org/10.1007/s10695-023-01211-7

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  • DOI: https://doi.org/10.1007/s10695-023-01211-7

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