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Gene action controlling cassava brown streak disease resistance and storage root yield in cassava

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Abstract

Cassava (Manihot esculenta Crantz) brown streak disease (CBSD) is currently one of the major constraints to sustained cassava production in Malawi. Its economic impact is mainly manifested in the storage roots where it causes pitting, necrosis and constriction. CBSD can effectively be managed by using resistant varieties as well as early harvesting especially if the varieties are early bulking (high storage root yield). However, development of resistant and high storage root bulking varieties requires an understanding of gene action controlling inheritance of the two traits. Currently, there is very little information in Malawi regarding the inheritance pattern and relative importance of general (GCA) and specific combining ability (SCA) of these two traits. Therefore, a study was conducted to determine mode of gene action as well as importance of GCA and SCA in the genetic control of CBSD resistance and storage root yield. Information generated is essential in the selection of parents and breeding strategies for an effective breeding programme. Thirty-six crosses were generated using a 6 × 6 North Carolina Design II and later evaluated for CBSD resistance and storage root bulking at two locations using a triple square lattice design. Data for the progenies were analysed using REML in Genstat (17th ed.) while family (crosses) data were analysed using a PROC Mixed procedure performed in SAS® 9.3 Software. The GCAf × location, GCAm × location and SCA × location interaction effects were highly significant (P < 0.01) for CBSDS and CBSDI. Pooled analysis across two locations showed highly significant (P < 0.01) variance among GCA due to females (GCAf) and GCA due to males (GCAm) for FSRY. These GCAf, GCAm and female × male interaction (SCA) effects accounted for 19.8, 33.4 and 46.7% of the sum of squares for CBSDS, respectively. The results suggested that additive gene effects predominantly controlled CBSD resistance and high storage root bulking. Four parental genotypes (Silira, Mulola, Phoso and Mkondezi) were identified as the best general combiners for the CBSD, high storage root bulking and other traits. Thirteen progenies exhibiting CBSD resistance and high storage root bulking were identified and selected for advancement.

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References

  • Acquaah G (2012) Principles of plant genetics and breeding, 2nd edn. Wiley, Chichester

    Book  Google Scholar 

  • Alvarez E, Llano GA, Mejía JF (2012) Cassava diseases in Latin America, Africa and Asia. In: Howeler RH (ed) The cassava handbook: a reference manual based on the asian regional cassava training course, held in Thailand Centro Internacional de Agricultura Tropical (CIAT), Bangkok, Thailand, pp 258–304

  • Benesi IRM, Labuschagne MT, Herselman L, Mahungu N (2010) Ethnobotany, morphology and genotyping of cassava germplasm from Malawi. J Biol Sci 10:616–623

    Article  Google Scholar 

  • Cach TN, Lenis JI, Pérez JC, Morante N, Calle F, Ceballos H (2006) Inheritance of relevant traits in cassava (Manihot esculenta Crantz) for sub-humid conditions. Plant Breed 125:177–182

    Article  Google Scholar 

  • Calle F, Perez JC, Gaitán W et al (2005) Diallel inheritance of relevant traits in cassava (Manihot esculenta Crantz) adapted to acid-soil savannas. Euphytica 144:177–186

    Article  Google Scholar 

  • Calvert LA, Thresh JM (2002) The viruses and virus diseases of cassava. In: Hillocks RJ et al (eds) Cassava: biology, production and utilization. CABI, Wallingford, pp 237–260

    Chapter  Google Scholar 

  • Ceballos H, Iglesias CA, Perez JC, Dixon AG (2004) Cassava breeding: opportunities and challenges. Plant Mol Biol 56:503–516

    Article  PubMed  CAS  Google Scholar 

  • Ceballos H, Kulakow P, Hershey C (2012) Cassava breeding: current status, bottlenecks and the potential of biotechnology tools. Trop Plant Biol 5:73–87

    Article  CAS  Google Scholar 

  • Ceballos H, Kawuki RS, Gracen VE, Yencho GC, Hershey CH (2015) Conventional breeding, marker assisted selection, genomic selection and inbreeding in clonally propagated crops: a case study for cassava. Theor Appl Genet 128:1647–1667

    Article  PubMed  PubMed Central  Google Scholar 

  • Chikoti PC (2011) Development of cassava (Manihot esculenta Crantz) cultivars for resistance to cassava mosaic disease in Zambia. Dissertation, University of Kwazulu-Natal

  • Chipeta MM (2012) Determination of combining abilities and mode of gene action for insect pests and disease resistance in cassava (Manihot esculenta Crantz) in Malawi. Dissertation, University of Malawi

  • Chipeta MM, Shanahan P, Melis R, Sibiya J, Benesi IRM (2016a) Farmers’ knowledge of cassava brown streak disease and its management in Malawi. Int J Pest Manag 62:175184

    Article  Google Scholar 

  • Chipeta MM, Shanahan P, Melis R, Sibiya J, Benesi IRM (2016b) Early storage root bulking index and agronomic traits associated with early bulking in cassava. Field Crops Res 198:171–178

    Article  Google Scholar 

  • Comstock RE, Robinson HF (1952) Estimation of average dominance of genes in heterosis. Iowa State College Press, Ames, pp 494–516

    Google Scholar 

  • Falconer DS, Mackay TFC (1996) Introduction to quantitative genetics, 4th edn. Longman Group Ltd., Harlow

    Google Scholar 

  • Fukuda WMG, Guevara CL, Kawuki R, Ferguson ME (2010) Selected morphological and agronomic descriptors for the characterization of cassava. International Institute of Tropical Agriculture (IITA), Ibadan

    Google Scholar 

  • Gondwe FMT, Mahungu NM, Hillocks RJ et al (2003) Economic losses experienced by smallscale farmers in Malawi due to cassava brown streak virus disease. In: Legg JP, Hillocks RJ (eds) Cassava brown streak virus disease: past, present and future. Proceedings of an international workshop. Natural Resources International Ltd, Mombasa, p 100

    Google Scholar 

  • Griffing B (1956a) A generalised treatment of the use of diallel crosses in quantitative inheritance. Heredity 10:31–50

    Article  Google Scholar 

  • Griffing B (1956b) Concept of general and specific combining ability in relation to diallel crossing systems. Aust J Biol Sci 9:463–493

    Article  Google Scholar 

  • Hillocks RJ, Jennings DL (2003) Cassava brown streak disease: a review of present knowledge and research needs. Int J Pest Manag 49:225–234

    Article  Google Scholar 

  • Hillocks RJ, Raya MD, Mtunda K, Kiozia H (2001) Effects of brown streak virus disease on yield and quality of cassava in Tanzania. J Phytopathol 149:389–394

    Article  Google Scholar 

  • Hinkelmann K (ed) (2012) Design and analysis of experiments, special designs and applications, 3rd edn. Wiley, New York

    Google Scholar 

  • IITA (1990) Cassava in tropical Africa. Chayce Publication Services, London

    Google Scholar 

  • Institute SAS (2011) SAS Software release 9.3. SAS Institute Inc, Cary

    Google Scholar 

  • Kamau J, Melis R, Laing M, Derera J, Shanahan P, Ngugi E (2010) Combining the yield ability and secondary traits of selected cassava genotypes in the semi-arid areas of Eastern Kenya. J Plant Breed Crop Sci 2:181–191

    Google Scholar 

  • Kawano K (1980) Cassava. In: Fehr WR, Hadley HH (eds) Hybridization of crop plants. ASA and CSSA, Madison, pp 225–233

    Google Scholar 

  • Kulembeka H, Ferguson M, Herselman L et al (2012) Diallel analysis of field resistance to brown streak disease in cassava (Manihot esculenta Crantz) landraces from Tanzania. Euphytica 187:277–288

    Article  Google Scholar 

  • Legg JP, Thresh JM (2003) Cassava virus diseases in Africa. In: Proceedings of the first international conference on plant virology in Sub-Saharan Africa. IITA, Ibadan, Nigeria, pp 517–552

  • Legg JP, Jeremiah SC, Obiero HM, Maruthi MN, Ndyetabula I, Okao-Okuja G et al (2011) Comparing the regional epidemiology of the cassava mosaic and cassava brown streak virus pandemics in Africa. Virus Res 159:161–170

    Article  PubMed  CAS  Google Scholar 

  • Lokko Y, Dixon AGO, Offei SK, Danquah EY (2006) Combining ability analysis of resistance to mosaic virus disease in cassava. Afr Crop Sci J 14:221–230

    Google Scholar 

  • Moyo CC, Benesi IRM, Sandifolo VS, Teri JM (1999) Current status of cassava and sweet potato production and utilization in Malawi. In: Akoroda MO, Teri JM (eds) Food security and crop diversification in SADC countries: the role of cassava and sweet potato. IITA, Ibadan, pp 51–68

    Google Scholar 

  • Mtunda KJ (2009) Breeding, evaluation and selection of cassava for high starch content and yield in Tanzania. Dissertation, University of Kwazulu-Natal

  • Munga TL (2008) Breeding for cassava brown streak disease resistance in Coastal Kenya. Dissertation, University of Kwazulu-Natal

  • O’Neill M (2010) ANOVA & REML. A guide to linear mixed models in an experimental design context. Statistical Advisory & Training Service Pty Ltd, Blackheath

    Google Scholar 

  • Ojulong HF (2006) Quantitative and molecular analyses of agronomic traits in cassava (Manihot esculenta Crantz). Dissertation, University of the Free State

  • Parkes EY (2011) Assessment of genetic diversity, combining ability, stability and farmer preference of cassava germplasm in Ghana. Dissertation, University of the Free State

  • Payne RW, Welham S, Harding S (2014) A guide to REML in GenStat. VSN International, London

    Google Scholar 

  • Shaba ER, Chipungu F, Mazuma EDL (2003) Cassava brown streak virus disease in Malawi. In: Legg JP, Hillocks RJ (eds) Cassava brown streak virus disease: past, present and future. Proceedings of an international workshop. Natural Resources International Ltd, Mombasa, p 100

    Google Scholar 

  • Singh RK, Chaudhary BD (1985) Biometrical methods in quantitative genetic analysis. Kalyani Publisher, New Delhi

    Google Scholar 

  • Tumuhimbise R (2013) Breeding and evaluation of cassava for high storage root yield and early bulking in Uganda. Dissertation, University of KwaZulu-Natal

  • Were WV (2011) Cassava breeding through complementary conventional and participatory approaches in western Kenya. Dissertation, University of KwaZulu-Natal

  • Winter S, Koerbler M, Stein B, Pietruszka A, Paape M, Butgereitt A (2010) Analysis of cassava brown streak viruses reveals the presence of distinct virus species causing cassava brown streak disease in East Africa. J Gen Virol 91:1365–1372

    Article  PubMed  CAS  Google Scholar 

  • Zacarias AM, Labuschagne MT (2010) Diallel analysis of cassava brown streak disease, yield and yield related characteristics in Mozambique. Euphytica 176:309–320

    Article  Google Scholar 

Download references

Acknowledgements

Chitala Agricultural Research Station and Bunda College of Agriculture that provided land and technical support for the trials. Special thanks to Fabiano Thulu and Alex Mwale for their assistance in data collection and entry. Alliance for a Green Revolution in Africa for the financial support towards the study and the African Centre for Crop Improvement for coordinating research activities.

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Correspondence to Michael M. Chipeta.

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Chipeta, M.M., Melis, R. & Shanahan, P. Gene action controlling cassava brown streak disease resistance and storage root yield in cassava. Euphytica 214, 104 (2018). https://doi.org/10.1007/s10681-018-2196-1

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