Skip to main content
Log in

Logistic model-based genetic analysis for kernel filling in a maize RIL population

  • Published:
Euphytica Aims and scope Submit manuscript

Abstract

Kernel filling is an important factor that directly affects kernel yield in maize. Based on a Logistic model, the process of kernel filling in maize can be effectively fitted, and the characteristic parameters with biological significance can be estimated. To clarify the genetic mechanism of characteristic parameters of kernel filling in maize, a recombinant inbred line (RIL) population including 208 lines derived from the maize inbred lines DH1M and T877 were evaluated in Nantong in 2015 and in Yangzhou in 2016, respectively. The kernel dry weights of recombinant inbred lines were measured 10, 15, 20, 25, 30, 35, 40, 43, 46, 49, 52, 55, 58 and 61 days after pollination (DAP). A total of 12 characteristic parameters related to kernel filling were estimated in different environments using the Logistic model. These parameters showed abundant phenotypic variation across two environments in the recombinant inbred line population. Some more ideal genotypes were selected through clustering based on BLUP values of characteristic parameters. Genetic analysis indicated that the 12 characteristic parameters conformed to the “major gene plus polygenes” model. The results of two environments were reproduced well. Most of the characteristic parameters related to kernel filling were controlled by two major genes, and a few characteristic parameters were controlled by three or four major genes. In addition, the genetic models of some characteristic parameters differed in the two environments due to interactions between the genes and environments. This study not only laid a foundation for further clarifying the genetic mechanism of maize kernel filling and mapping the related genes but also suggests a new paradigm for dynamic developing traits.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4

Similar content being viewed by others

References

  • Bauer AM, Reetz TC, Léon J (2006) Estimation of breeding values of inbred lines using best linear unbiased prediction (BLUP) and genetic similarities. Crop Sci 46:2685–2691

    Article  CAS  Google Scholar 

  • Borrás L, Zinselmeier C, Senior ML, Westgate ME, Muszynski MG (2009) Characterization of grain-filling patterns in diverse maize germplasm. Crop Sci 49:999–1009

    Article  Google Scholar 

  • Cao X, Liu B, Zhang Y (2013) SEA: a software package of segregation analysis of quantitative traits in plants. J Nanjing Agric Univ 36:1–6

    Google Scholar 

  • Eichenberger S, Miguez F, Edwards J et al (2015) Changes in kernel filling with selection for grain yield in a maize population. Crop Sci 55:1–6

    Article  Google Scholar 

  • Ershkov S (2011) Logistic equation of human population growth (generalization to the case of reactive environment). BMC Med Genomics 6(1):39

    Google Scholar 

  • Gai JY (2005) Segregation analysis of genetic system of quantitative traits in plants. Hereditas 27:130

    PubMed  Google Scholar 

  • Gasura E, Setimela P, Edema R, Gibson PT, Okori P, Tarekegne A (2013) Exploiting grain-filling rate and effective grain-filling duration to improve grain yield of early-maturing maize. Crop Sci 53:2295–2303

    Article  Google Scholar 

  • Gelang J, Pleijel H, Sild E et al (2010) Rate and duration of grain filling in relation to flag leaf senescence and grain yield in spring wheat (Triticum aestivum) exposed to different concentrations of ozone. Physiol Plant 110(3):366–375

    Article  Google Scholar 

  • Jongkaewwattana S, Geng S (2001) Inter-relationships amongst grain characteristics, grain-filling parameters and rice (Oryza sativa L.) milling quality. J Agron Crop Sci 187:223–229

    Article  Google Scholar 

  • Kass RE et al (1990) Nonlinear regression analysis and application. Technometrics 23(3):309

    Google Scholar 

  • Kordestani R et al (2009) Yield potential assessment of different Iranian sesame landraces under various levels of Iron in Jiroft. J Plant Ecophysiol 1(2):85–90

    Google Scholar 

  • Liu ZH, Ji HQ, Cui ZT, Wu X, Duan LJ, Feng XX, Tang JH (2011) QTL detected for grain-filling rate in maize using a RIL population. Mol Breed 27:25–36

    Article  Google Scholar 

  • Löffler CM et al (2005) Classification of maize environments using crop simulation and geographic information systems. Crop Sci 45:1708–1716

    Article  Google Scholar 

  • Maydup ML, Antonietta M, Guiamet JJ, Graciano C, López JR, Tambussi EA (2010) The contribution of ear photosynthesis to grain filling in bread wheat (Triticum aestivum L.). Field Crop Res 119:48–58

    Article  Google Scholar 

  • Mo HD (1993) Genetic analysis for qualitative-quantitative traits I. The genetic constitution of generation populations and the identification of major gene genotypes. Acta Agron Sinica 19(1):1–6

    Google Scholar 

  • Ogawa K (2012) Mathematical analysis of age-related changes in leaf biomass in forest stands. Can J For Res 42:356–363

    Article  Google Scholar 

  • Parvizi S et al (2009) Evaluation of different plant densities effects on grain filling rate and duration, yield and its components in pinto bean varieties. Res J Biol Sci 4(4):499–502

    Google Scholar 

  • Pearl R, Reed LJ (1920) On the rate of growth of the population of the United States since 1790 and its mathematical representation. Proc Natl Acad Sci USA 6:275–288

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Prado SA, Sadras VO, Borrás L (2014) Independent genetic control of maize (Zea mays L.) kernel weight determination and its phenotypic plasticity. J Exp Bot 65(15):4479

    Article  CAS  Google Scholar 

  • Sadras VO, Egli DB (2008) Seed size variation in grain crops: allometric relationships between rate and duration of seed growth. Crop Sci 48:1–8

    Article  Google Scholar 

  • Sun S, Frelich LE (2011) Flowering phenology and height growth pattern are associated with maximum plant height, relative growth rate and stem tissue mass density in herbaceous grassland species. J Ecol 99:991–1000

    Article  Google Scholar 

  • Takai T, Fukuta Y, Shiraiwa T, Horie T (2005) Time-related mapping of quantitative trait loci controlling grain-filling in rice (Oryza sativa L.). J Exp Bot 56:2107–2118

    Article  PubMed  CAS  Google Scholar 

  • Thevenot C et al (2005) QTLs for enzyme activities and soluble carbohydrates involved in starch accumulation during grain filling in maize. J Exp Bot 56:945–958

    Article  PubMed  CAS  Google Scholar 

  • Thornley JHM, Shepherd JJ, France J (2007) An open-ended logistic-based growth function: analytical solutions and the power-law logistic model. Ecol Model 204:531–534

    Article  Google Scholar 

  • Wang G, Kang MS, Moreno O (1999) Genetic analyses of grain-filling rate and duration in maize. Field Crop Res 61:211–222

    Article  Google Scholar 

  • Wei F, Tao H, Lin S et al (2011) Rate and duration of grain filling of aerobic rice HD297 and their influence on grain yield under different growing conditions. Scienceasia 37(2):98–104

    Article  CAS  Google Scholar 

  • West GB, Brown JH, Enquist BJ (2001) A general model for ontogenetic growth. Nature 413(6856):628–631

    Article  PubMed  CAS  Google Scholar 

  • Wilhelm EP, Mullen RE, Keeling PL, Singletary GW (1999) Heat stress during grain filling in maize: effects on kernel growth and metabolism. Crop Sci 6:1733–1740

    Article  Google Scholar 

  • Wu R, Ma C, Chang M et al (2002) A logistic mixture model for characterizing genetic determinants causing differentiation in growth trajectories. Genet Res 79(3):235–245

    Article  PubMed  Google Scholar 

  • Xu S (2003) Estimating polygenic effects using markers of the entire genome. Genetics 163:789

    PubMed  PubMed Central  CAS  Google Scholar 

  • Zhang YM, Gai JY, Yang YH (2003) The EIM algorithm in the joint segregation analysis of quantitative traits. Genet Res 81:157–163

    Article  PubMed  Google Scholar 

  • Zhang Z, Liu Z, Cui Z, Hu Y, Wang B, Tang J (2013) Genetic analysis of grain filling rate using conditional QTL mapping in maize. PLoS ONE 8:e56344

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Zhang Z et al (2016) Genetic dissection of the maize kernel development process via conditional QTL mapping for three developing kernel-related traits in an immortalized F2 population. Mol Genet Genomics 291:437–454

    Article  PubMed  CAS  Google Scholar 

Download references

Acknowledgements

This work was supported by Grants from the National Key Technology Research and Development Program of MOST (2016YFD0100300), the National High-tech R&D Program (863 Program) (2014AA10A601-5), the National Natural Science Foundations (31391632, 91535103 and 31601810), the Natural Science Foundations of Jiangsu Province (BK20150010), the Priority Academic Program Development of Jiangsu Higher Education Institutions, the Natural Science Foundation of the Jiangsu Higher Education Institutions (14KJA210005), and the Innovative Research Team of Universities in Jiangsu Province.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Chenwu Xu.

Electronic supplementary material

Below is the link to the electronic supplementary material.

Supplementary material 1 (DOCX 43 kb)

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Yin, S., Li, P., Xu, Y. et al. Logistic model-based genetic analysis for kernel filling in a maize RIL population. Euphytica 214, 86 (2018). https://doi.org/10.1007/s10681-018-2162-y

Download citation

  • Received:

  • Accepted:

  • Published:

  • DOI: https://doi.org/10.1007/s10681-018-2162-y

Keywords

Navigation