Abstract
Faba bean (Vicia faba L.) is a grain legume primarily used for animal feed and human food grown in a range of environments, globally. Time of flowering in faba bean is critical for adaptation to specific environments and is controlled largely by factors such as ambient temperature and photoperiod. The aim of this study was to investigate the genetic control of flowering time and the responses of flowering time to ambient temperature and photoperiod in faba bean. A bi-parental recombinant inbred line population (Icarus × Ascot) was evaluated over three years in field trials and three different controlled environments with varying temperatures and photoperiods. QTL analysis identified eight regions of co-localised QTLs associated with days to flowering, thermal time to flowering and node of first flower; on Chr-I.A/III/V, Chr-I.B.3, Chr-III.1, Chr-III.2, Chr-V.1 and Chr-V.2. Two of the detected regions are common with previously detected QTLs, up to two more are possibly common and the remaining four appear to be novel. For the first time, the associations of these QTLs with ambient temperature and photoperiod response were described. Candidate genes for some of the QTLs were identified using the associations with ambient temperature and photoperiod response together with knowledge extended from other legumes that have a syntenic relationship with faba bean.



Similar content being viewed by others
Explore related subjects
Discover the latest articles and news from researchers in related subjects, suggested using machine learning.References
Amasino RM, Michaels SD (2010) The timing of flowering. Plant Physiol 154(2):516–520. doi:10.1104/pp.110.161653
Bureau of Meteorology (2014) Commonwealth of Australia. http://www.bom.gov.au/. Accessed 20 June 2014
Butler D, Cullis B, Gilmour A, Gogel B (2009) Mixed models for S language environments: ASReml-R reference manual. Queenland Department of Primary Industries and Fisheries, Brisbane
Capovilla G, Schmid M, Posé D (2014) Control of flowering by ambient temperature. J Exp Bot 66:59–69. doi:10.1093/jxb/eru416
Collins WJ, Wilson JH (1974) Node of flowering as an index of plant development. Ann Bot 38(1):175–180
Cruz-Izquierdo S, Avila CM, Satovic Z, Palomino C, Gutierrez N, Ellwood SR, Phan HTT, Cubero JI, Torres AM (2012) Comparative genomics to bridge Vicia faba with model and closely-related legume species: stability of QTLs for flowering and yield-related traits. Theor Appl Genet 125(8):1767–1782. doi:10.1007/s00122-012-1952-1
Deokar A, Daba K, Tar’an B (2015) QTL to candidate genes: understanding photoperiod sensitivity and flowering time in chickpea. J Int Legum Soc 7:10–11
Ellis RH, Roberts EH, Summerfield RJ (1988a) Effects of temperature, photoperiod and seed vernalization on flowering in faba bean (Vicia faba L.). Ann Bot 61(1):17–27
Ellis RH, Roberts EH, Summerfield RJ (1988b) Photothermal time for flowering in faba bean (Vicia faba L.) and the analysis of potential vernalization responses. Ann Bot 61(1):73–82
Ellis RH, Roberts EH, Summerfield RJ (1988c) Variation in the optimum temperature for rates of seedling emergence and progress towards flowering amongst six genotypes of faba bean (Vicia faba L.). Ann Bot 62(2):119–126
Ellis RH, Summerfield RJ, Roberts EH (1990) Flowering in faba bean: genotypic differences in photoperiod sensitivity, similarities in temperature sensitivity, and implications for screening germplasm. Ann Bot 65(2):129–138
Evans LT (1959) Environmental control of flowering in Vicia faba L. Ann Bot 23(4):521–546
FAO (2016) United Nations. http://faostat3.fao.org/download/Q/QC/E. Accessed 10 Oct 2016
Hecht V, Foucher F, Ferrandiz C, Macknight R, Navarro C, Morin J, Vardy ME, Ellis N, Beltran JP, Rameau C, Weller JL (2005) Conservation of Arabidopsis flowering genes in model legumes. Plant Physiol 137(4):1420–1434. doi:10.1104/pp.104.057018
Hecht V, Laurie RE, Vander Schoor JK, Ridge S, Knowles CL, Liew LC, Sussmilch FC, Murfet IC, Macknight RC, Weller JL (2011) The pea GIGAS gene is a FLOWERING LOCUS T homolog necessary for graft-transmissible specification of flowering but not for responsiveness to photoperiod. Plant Cell 23(1):147–161. doi:10.1105/tpc.110.081042
Kaur S, Kimber RB, Cogan NO, Materne M, Forster JW, Paull JG (2014) SNP discovery and high-density genetic mapping in faba bean (Vicia faba L.) permits identification of QTLs for ascochyta blight resistance. Plant Sci 217–218:47–55. doi:10.1016/j.plantsci.2013.11.014
Khazaei H, O’Sullivan D, Sillanpää M, Stoddard F (2014) Use of synteny to identify candidate genes underlying QTL controlling stomatal traits in faba bean (Vicia faba L.). Theor Appl Genet 127(11):2371–2385. doi:10.1007/s00122-014-2383-y
Kim MY, Kang YJ, Lee T, Lee S-H (2013) Divergence of flowering-related genes in three legume species. Plant Genome. doi:10.3835/plantgenome2013.03.0008
Kong F, Liu B, Xia Z, Sato S, Kim BM, Watanabe S, Yamada T, Tabata S, Kanazawa A, Harada K, Abe J (2010) Two coordinately regulated homologs of FLOWERING LOCUS T are involved in the control of photoperiodic flowering in soybean. Plant Physiol 154(3):1220–1231. doi:10.1104/pp.110.160796
Laurie RE, Diwadkar P, Jaudal M, Zhang L, Hecht V, Wen J, Tadege M, Mysore KS, Putterill J, Weller JL, Macknight RC (2011) The Medicago FLOWERING LOCUS T homolog, MtFTa1, is a key regulator of flowering time. Plant Physiol 156(4):2207–2224. doi:10.1104/pp.111.180182
Liew LC, Hecht V, Sussmilch FC, Weller JL (2014) The pea photoperiod response gene STERILE NODES is an ortholog of LUX ARRHYTHMO. Plant Physiol 165(2):648–657. doi:10.1104/pp.114.237008
McDonald GK, Adisarwanto T, Knight R (1994) Effect of time of sowing on flowering in faba bean (Vicia faba L.). Aust J Exp Agric 34(3):395–400. doi:10.1071/ea9940395
Murfet IC (1985) Pisum Sativum L. In: Havley AH (ed) CRC handbook of flowering, vol 4. CRC Press, Boca Raton, pp 97–126
Patrick JW, Stoddard FL (2010) Physiology of flowering and grain filling in faba bean. Field Crop Res 115(3):234–242. doi:10.1016/j.fcr.2009.06.005
Pierre J-B, Huguet T, Barre P, Huyghe C, Julier B (2008) Detection of QTLs for flowering date in three mapping populations of the model legume species Medicago truncatula. Theor Appl Genet 117(4):609–620. doi:10.1007/s00122-008-0805-4
Rehman AU, Malhotra RS, Bett K, Tar’an B, Bueckert R, Warkentin TD (2011) Mapping QTL associated with traits affecting grain yield in chickpea (Cicer arietinum L.) under terminal drought stress. Crop Sci 51(2):450–463. doi:10.2135/cropsci2010.03.0129
Ren X, Li C, Cakir M, Zhang W, Grime C, Zhang X-Q, Broughton S, Sun D, Lance R (2012) A quantitative trait locus for long photoperiod response mapped on chromosome 4H in barley. Mol Breed 30(2):1121–1130. doi:10.1007/s11032-012-9700-4
Rispail N, Kalo P, Kiss GB, Ellis THN, Gallardo K, Thompson RD, Prats E, Larrainzar E, Ladrera R, Gonzalez EM, Arrese-Igor C, Ferguson BJ, Gresshoff PM, Rubiales D (2010) Model legumes contribute to faba bean breeding. Field Crop Res 115(3):253–269. doi:10.1016/j.fcr.2009.03.014
Sallam A, Dhanapal AP, Liu S (2016) Association mapping of winter hardiness and yield traits in faba bean (Vicia faba L.). Crop Pasture Sci 67(1):55–68
Satovic Z, Avila CM, Cruz-Izquierdo S, Diaz-Ruiz R, Garcia-Ruiz GM, Palomino C, Gutierrez N, Vitale S, Ocana-Moral S, Victoria Gutierrez M, Cubero JI, Torres AM (2013) A reference consensus genetic map for molecular markers and economically important traits in faba bean (Vicia faba L.). BMC Genomics 14:932. doi:10.1186/1471-2164-14-932
Smith ML (1982) Factors affecting flower abscission in field beans (Vicia faba L. minor). Durham Theses, Durham University. http://etheses.dur.ac.uk/7698/
Sourdille P, Snape JW, Cadalen T, Charmet G, Nakata N, Bernard S, Bernard M (2000) Detection of QTLs for heading time and photoperiod response in wheat using a doubled-haploid population. Genome 43(3):487–494. doi:10.1139/gen-43-3-487
Torres AM, Avila CM, Gutierrez N, Palomino C, Moreno MT, Cubero JI (2010) Marker-assisted selection in faba bean (Vicia faba L.). Field Crop Res 115(3):243–252. doi:10.1016/j.fcr.2008.12.002
Varshney RK, Thudi M, Nayak SN, Gaur PM, Kashiwagi J, Krishnamurthy L, Jaganathan D, Koppolu J, Bohra A, Tripathi S, Rathore A, Jukanti AK, Jayalakshmi V, Vemula A, Singh SJ, Yasin M, Sheshshayee MS, Viswanatha KP (2014) Genetic dissection of drought tolerance in chickpea (Cicer arietinum L.). Theor Appl Genet 127(2):445–462. doi:10.1007/s00122-013-2230-6
Wang S, Basten CJ, Zeng ZB (2012) Windows QTL Cartographer v2.5. Department of Statistics, North Carolina State University, Raleigh, NC. http://statgen.ncsu.edu/qtlcart/WQTLCart.htm
Weller JL, Ortega R (2015) Genetic control of flowering time in legumes. Front Plant Sci 6:207. doi:10.3389/fpls.2015.00207
Weller JL, Reid JB, Taylor SA, Murfet IC (1997) The genetic control of flowering in pea. Trends Plant Sci 2(11):412–418. doi:10.1016/s1360-1385(97)01127-8
Acknowledgements
This research was funded by the Grains Research and Development Corporation, Australia. Statistical assistance was provided by Paul Eckermann (Biometry Hub, The University of Adelaide). We would also like to thank Margaret Pallotta (Australian Centre for Plant Functional Genomics) for guidance in the interpretation of the QTL analysis and the technical staff, past and present, of the Faba Bean Breeding Group at The University of Adelaide, including Ian Roberts, Kevin James and Paul Swain for their support and for carrying out the 2011 and 2012 field experiments.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Catt, S.C., Braich, S., Kaur, S. et al. QTL detection for flowering time in faba bean and the responses to ambient temperature and photoperiod. Euphytica 213, 125 (2017). https://doi.org/10.1007/s10681-017-1910-8
Received:
Accepted:
Published:
DOI: https://doi.org/10.1007/s10681-017-1910-8


