Abstract
Sheath blight (ShB) disease, caused by Rhizoctonia solani, is an economically important rice disease worldwide, especially in intensive production systems. Several studies have been conducted to identify sources for ShB resistance in different species of rice, including local accessions and landraces. To date, none of the genotypes screened are immune to ShB, although variation in levels of resistance have been reported. Several quantitative trait loci (QTL) for ShB resistance have been identified using mapping populations derived from indica or japonica rice. A total of 33 QTL associated with ShB resistance located on all 12 rice chromosomes have been reported, with ten of these co-localizing with QTL for morphological attributes, especially plant height, or for heading date. Sixteen QTL, from the same or differing genetic backgrounds, have been mapped at least twice. Of these, nine QTL were independent of morphological traits and heading date. We hypothesize that two main, distinct, mechanisms contribute to ShB resistance: physiological resistance and disease escape. Strategies to improve our understanding of the genetics of resistance to ShB are discussed.
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References
Acharya S, Sengupta PK (1998) Collateral hosts of rice sheath blight fungus Rhizoctonia solani. Oryza 35:89–90
Agarwal M, Shrivastava N, Padh H (2008) Advances in molecular marker techniques and their applications in plant sciences. Plant Cell Rep 27:617–631
Ahn SW, de la Peña R, Candole BL, Mew TW (1986) A new scale for rice sheath blight (ShB) assessment. Int Rice Res Newsl 11(6):17
Amante AD, de la Pena R, Stich LA, Leung H, Mew TW (1990) Sheath blight (ShB) resistance in wild rices. Int Rice Res Newsl 15(3):5
Ansari MM, Sharma A, Thangal MH (1989) Evaluation of rice cultures against sheath blight. J Andaman Sci Assoc 5:89–90
Arraiano LS, Balaam N, Fenwick PM, Chapman C, Feuerhelm D, Howell P, Smith SJ, Widdowson JP, Brown JKM (2009) Contributions of disease resistance and escape to the control of Septoria tritici blotch of wheat. Plant Pathol 58:910–922
Baisakh N, Datta K, Oliva N, Ona I, Rao GJN, Mew TW, Datta SK (2001) Rapid development of homozygous transgenic rice using anther culture harboring rice chitinase gene for enhanced sheath blight resistance. Plant Biotechnol 18:101–108
Bhaktavatsalam G, Satyanarayana K, Reddy APK, John VT (1978) Evaluation of sheath blight resistance in rice. Int Rice Res Newsl 3:9–10
Biswas A (1999) Resistance of rice germplasm to sheath blight disease in West Bengal, India. Environ Ecol 17:1039–1040
Biswas A (2001) Reaction of hybrid rice varieties to sheath blight (ShB) disease in West Bengal, India. J Mycol Plant Pathol 31:360–361
Biswas A (2005) Screening of rice varieties for sheath blight (ShB) disease tolerance in West Bengal, India. Oryza 42:83–84
Bonmann JM, Kush GS, Nelson RJ (1992) Breeding for resistance to pests. Annu Rev Phytopathol 30:507–523
Borah P, Baruah DK, Ali MS, Kalita UC, Hazarika MH (1994) Evaluation of indigenous Ahu rice germplasm for resistance to leaf blast, bacterial blight and sheath blight diseases. J Agric Sci Soc North East India 7:111–113
Borthakur BK, Addy SK (1988) Screening of rice (Oryza sativa) germplasm for resistance to sheath blight (Rhizoctonia solani). Indian J Agric Sci 58(7):537–538
Brar DS, Khush GS (1997) Alien introgression in rice. Plant Mol Biol 35:35–47
Butt DJ, Royle DJ (1980) The importance of terms and definitions for a conceptually unified epidemiology. In: Palti J, Kranz J (eds) Comparative epidemiology. A tool for better disease management. Pudoc, Wageningen
Castilla NP, Leano RM, Elazegui FA, Teng PS, Savary S (1996) Effects of plant contact, inoculation pattern, leaf wetness regime, and nitrogen supply on inoculum efficiency in rice sheath blight. J Phytopathol 144:187–192
Channamallikarjuna V, Sonah H, Prasad M, Rao GJN, Chand S, Upreti HC, Singh NK, Sharma TR (2010) Identification of major quantitative trait loci qSBR11-1 for sheath blight resistance in rice. Mol Breed 25:155–166
Che KP, Zhan QC, Xing QH, Wang ZP, Jin DM, He DJ, Wang B (2003) Tagging and mapping of rice sheath blight resistant gene. Theor Appl Genet 106:293–297
CIAT (1972) Annual report 1972. Centro International de Agricultura Tropical, Cali
Crill P, Nuque FL, Estrada BA, Bandong JM (1982) The role of varietal resistance in disease management. In: IRRI (ed) Evolution of gene rotation concept for rice blast control. International Rice Research Institute, Los Banos, pp 103–121
Cu RM, Mew TW, Cassman KG, Teng PS (1996) Effect of sheath blight on yield in tropical, intensive rice production system. Plant Dis 80:1103–1108
Damicone JP, Patel MV, Moore WF (1993) Density of sclerotia of Rhizoctonia solani and incidence of sheath blight in rice fields in Mississippi. Plant Dis 77:257–260
Das NP (1970) Resistance of some improved varieties of rice (Oryza sativa L.) to sheath blight caused by Rhizoctonia solani Kuhn. Indian J Agric Sci 40:566–568
Dath AP, Devadath S, Rao CS, Naidu VD, Swain A (1976) Screening for IRON against sheath blight at CRRI. Int Rice Res Newsl 1(2):7
Datta K, Muthukrishnan S, Datta SK (1999a) Expression and function of PR-protein genes in transgenic plants. In: Datta K, Muthukrishnan S (eds) Pathogenesis-related protein in plants. CRC Press, Boca Raton, pp 261–277
Datta K, Velazhahan R, Oliva N, Ona I, Mew T, Khush GS, Muthukrishnan S, Datta SK (1999b) Over-expression of the cloned rice thaumatin-like protein (PR-5) gene in transgenic rice plants enhances environmental friendly resistance to Rhizoctonia solani causing sheath blight disease. Theor Appl Genet 98:1138–1145
Datta K, Koukolikova-Nicola Z, Baisakh N, Oliva N, Datta SK (2000) Agrobacterium-mediated engineering for sheath blight resistance of indica rice cultivars from different ecosystems. Theor Appl Genet 100:832–839
Datta K, Tu JM, Oliva N, Ona I, Velazhahan R, Mew TW, Muthukrishnan S, Datta SK (2001) Enhanced resistance to sheath blight by constitutive expression of infection-related rice chitinase in transgenic elite indica rice cultivars. Plant Sci 160:405–414
Datta K, Baisakh N, Maung Thet K, Tu J, Datta SK (2002) Pyramiding transgenes for multiple resistance in rice against bacterial blight, yellow stem borer and sheath blight. Theor Appl Genet 106:1–8
Delteil A, Zhang J, Lessard P, Morel JB (2010) Potential candidate genes for improving rice disease resistance. Rice 3:56–71
Draeger R, Gosman N, Steed A, Chandler E, Thomsett M, Srinivasachary, Schondelmaier J, Buerstmayr H, Lemmens M, Schmolke M, Mesterhazy A, Nicholson P (2007) Identification of QTL for resistance to Fusarium head blight, DON accumulation and associated traits in the winter wheat variety Arina. Theor Appl Genet 115(5):617–625
Eizenga GC, Lee FN, Rutger JN (2002) Screening of Oryza species plants for rice sheath blight. Plant Dis 68:808–812
Eizenga GC, Agrama HA, Lee FN, Jia Y (2009) Exploring genetic diversity and potential novel disease resistance genes in a collection of rice (Oryza spp.) wild relatives. Genet Resour Crop Evol 56:65–76
Fan KC, Kang XW, Peng SQ, Zou HX, Yang XY, Wan GA (1993) The comprehensive effect of nitrogen, irrigation and sclerotium number on the epidemics of rice sheath blight. Acta Phytophyl Sin 20:97–103
Flint-Garcia SA, Thuillet AC, Yu J, Pressoir G, Romero SM et al (2005) Maize association population: a high-resolution platform for quantitative trait locus dissection. Plant J 44:1054–1064
Gangopadyay S, Chakrabarti NK (1982) Sheath blight on rice. Rev Plant Pathol 61:451–460
Goel RK, Lore JS (2004) Some sources of multiple disease resistance in rice in the irrigated agroecosystem in north-western India. Plant Dis Res (India) 19:167–168
Gokulapulan C, Nair MC (1983) Field screening of sheath blight and rice root nematode. Int Rice Res Newsl 8(6):4
Gong GS, Zhang SR (2002) Fractal analysis of lesion patterns of plant diseases. Plant Prot 28:9–13
Gou FS, Li XQ, Xu CL (1983) Study on the spatial distribution patterns of the rice sheath blight plant in rice field and its practical applications. Acta Phytopathol Sin 13:27–34
Green DE II, Burpee LL, Stevenson KL (1999) Components of resistance to Rhizoctonia solani associated with two tall fescue cultivars. Plant Dis 83:834–838
Groth DE, Novick EM (1992) Selection for resistance to sheath blight through the number of infection cushions and lesion type. Plant Dis 76:721–723
Guo C, Chen Z, Wang F (1985) Pathogenic variety of sheath blight of rice caused by (Frank) Donk and identification of techniques of varietal Thanatephorus cucumeris resistance. Sci Agric Sin 5:50–57
Gupta PK, Rustgi S, Kulwal PL (2005) Linkage disequilibrium and association studies in higher plants: present status and future prospects. Plant Mol Biol 57:461–485
Han PY, Xing ZY, Chen XZ, Gu LS, Pan BX, Chen LX, Zhang FQ (2002) Mapping QTLs for horizontal resistance to sheath blight in an elite rice restorer line, Minghui 63. Acta Genet Sin 29(4):622–626
Hashiba T (1984) Forecasting model and estimation of yield loss by sheath blight disease. Jpn Agric Res Q 18:92–98
Hashiba T, Koike K, Yuno I, Yamada M (1982) Model of vertical development of sheath blight lesions on rice plants caused by Rhizoctonia solani Kuhn. Ann Phytopathol Soc Jpn 48:499–505
Hein (1990) Reaction of germplasm to sheath blight of rice. Myanmar J Agric Sci 2:1–12
Hua L, ChengYan S, WanBiao C, GuiLing W (2000) Evaluation and screening of resistance in keng rice varieties to sheath blight. Plant Prot 26:19–21
IRRI (1976) Standard evaluation system for rice. International Rice Research Institute, Los Banos, Philippines
IRRI (1987) Annual report for 1987. International Rice Resarch Institute, Los Baños, Philippines
IRRI (1992) Annual report for 1992. International Rice Resarch Institute, Los Baños, Philippines
IRRI (1993) Annual report for 1993. International Rice Resarch Institute, Los Baños, Philippines
Jaccoud D, Peng K, Feinstein D, Kilian A (2001) Diversity arrays: a solid state technology for sequence information independent genotyping. Nucleic Acids Res 29(7):e25
James WC (1974) Assessment of plant diseases and losses. Annu Rev Phytopathol 12:27–49
Jena KK, Mackill DJ (2008) Molecular markers and their use in marker-assisted selection in rice. Crop Sci 48:1266–1276
Jenkyn JF, Bainbridge A, Dyke GV, Todd AD (1979) An investigation into inter-plot interaction, in experiments with mildew on barley, using balanced designs. Ann Appl Biol 92:11–28
Jha S, Chattoo BB (2009a) Expression of a plant defensin in rice confers resistance to fungal phytopathogens. Transgenic Res 19:373–384
Jha S, Chattoo BB (2009b) Transgene stacking and coordinated expression of plant defensins confer fungal resistance in rice. Rice 2:143–154
Jha S, Tank HG, Prasad BD, Chattoo BB (2009) Expression of Dm-AMP1 in rice confers resistance to Magnaporthe oryzae and Rhizoctonia solani. Transgenic Res 18:59–69
Jia Y, Singh P, Eizenga GC, Lee FN, Cartwright RD (2002) In vitro identification of cultivar responses to rice sheath blight pathogen Rhizoctonia solani. In: Wells BR (ed) Rice research studies 2002. Arkansas Agricultural Experiment Station research series 504. Arkansas Agricultural Experiment Station, Fayetteville, pp 229–236. Available at: http://arkansasagnews.uark.edu/1321.htm
Jia Y, Correa-Victoria F, McClung A, Zhu L, Liu G, Wamishe Y, Xie J, Marchetti MA, Pinson SRM, Rutger JN, Correll JC (2007) Rapid determination of rice cultivar responses to the sheath blight pathogen Rhizoctonia solani using a micro-chamber screening method. Plant Dis 91:485–489
Jia LM, Agrama H, Yeater K, McClung A, Wu D (2009a) Evaluation of the USDA rice core collection for sheath blight disease using micro-chamber. In: Int Annu Meet Footprints in the Landscape: Sustainability through Plant and Soil Sciences. Pittsburgh. Available at: http://a-c-s.confex.com/crops/2009am/webprogram/Paper52830.html
Jia Y, Liu G, Costanzo S, Lee S, Dai Y (2009b) Current progress on genetic interactions of rice with rice blast and sheath blight. Front Agric China 3:231–239
John VT, Reddy AP, Amin KS (1978) Disease garden: a technique for evaluating rice diseases simultaneously for resistance. Indian J Agric Sci 48:261–263
Jones N, Ougham H, Thomas H, Pasakinskiene I (2009) Markers and mapping revisited: finding your gene. New Phytol 183:935–966
Kalpana K, Maruthasalam S, Rajesh T, Poovannan K, Kumar KK, Kokiladevi E, Raja JAJ, Sudhakar D, Velazhahan R, Samiyappan R, Balasubramanian P (2006) Engineering sheath blight resistance in elite indica rice cultivars using genes encoding defense proteins. Plant Sci 170:203–215
Khush GS (1977) Disease and insect resistance in rice. Adv Agron 29:268–341
Kim CHK, Kim C (1987) Density and viability of sclerotia of rice sheath blight pathogen overwintering in field. Korean J Plant Prot 26:99–106
Kim J-K, Jang I-C, Wu R, Zuo WN, Boston RS, Lee Y-H, Ahn I-P, Nahm BH (2003) Co-expression of a modified maize ribosome-inactivating protein and a rice basic chitinase gene in transgenic rice plants confers enhanced resistance to sheath blight. Transgenic Res 12:475–484
Kobayashi T, Ishiguro K, Nakajima T, Kim HY, Okada M, Kobayashi K (2006) Effects of elevated atmospheric CO2 concentration on the infection of rice blast and sheath blight. Ann Phytopathol Soc Jpn 63:324–327
Krishnamurthy K, Balconi C, Sherwood JE, Giroux MJ (2001) Wheat puroindolines enhance fungal disease resistance in transgenic rice. Mol Plant Microbe Interact 14:1255–1260
Krysan P, Young L, Sussman M (1999) T-DNA as an insertional muatagen in Arabidopsis. Plant Cell 11:8
Kumari SL, Joseph T, Nayr NK, Niza TJR (1998) Field tolerance levels of indica rice varieties for major diseases of Kerala. Crop Res (Hisar) 15:112–114
Kunihiro Y, Qian Q, Sato H, Teng S, Zeng DL, Fujimoto K, Zhu LH (2002) QTL analysis of sheath blight resistance in rice (Oryza sativa L.). Acta Genet Sin 29:5
Lakshmanan P, Velusamy R (1991) Resistance to sheath blight (ShB) and brown spot (BS) in lines derived from Oryza officinalis. Int Rice Res Newsl 16:8
Lee FN, Dilday RH, Moldenhauer KAK, Rutger JN, Yan W (1999) Sheath blight and rice blast resistance in recently introduced rice germplasm. Res Ser Ark Agric Exp Stn 468:195–210
Li ZK, Pinson SRM, Marchetti MA, Stansel JW, Park WD (1995) Characterization of quantitative trait loci (QTLs) in cultivated rice contributing to field-resistance to sheath blight (Rhizoctonia solani). Theor Appl Genet 91:382–388
Li P, Pei Y, Sang XC, Ling YH, Yang ZL, He GH (2009) Transgenic indica rice expressing a bitter melon (Momordica charantia) class I chitinase gene (McCHIT1) confers enhanced resistance to Magnaporthe grisea and Rhizoctonia solani. Eur J Plant Pathol 125:533–543
Lin W, Anuratha CS, Datta K, Potrykus I, Muthukrishnan S, Datta SK (1995) Genetic-engineering of rice for resistance to sheath blight. Bio-Technology 13:686–691
Liu G, Jia Y, Correa-Victoria FJ, Prado GA, Yeater KM, McClung A, Correll JC (2009) Mapping quantitative trait loci responsible for resistance to sheath blight in rice. Phytopathology 99:1078–1084
Madden LV, Hughes G, Van den Bosch F (2007) The study of plant disease epidemics. The American Phytopathology Press, St Paul
Manian S, Rao KM (1979) Resistance to sheath blight disease in India. Int Rice Res Newsl 4:5–6
Marchetti MA, Bollich CN (1991) Quantification of the relationship between sheath blight severity and yield loss in rice. Plant Dis 75:773–774
Marchetti MA, Bollich CN, McClung AM, Scott JE, Webb BD (1995) Registration of RU8703196 disease-resistant rice germplasm. Crop Sci 35(2):601
Marchetti MA, McClung AM, Webb BD, Bollich CN (1996) Registration of B82-761 long-grain rice germplasm resistant to blast and sheath blight. Crop Sci 36(3):815
Maruthasalam S, Kalpana K, Kumar KK, Loganathan M, Poovannan K, Raja JAJ, Kokiladevi E, Samiyappan R, Sudhakar D, Balasubramanian P (2007) Pyramiding transgenic resistance in elite indica rice cultivars against the sheath blight and bacterial blight. Plant Cell Rep 26:791–804
Meena B, Muthusamy M (1998) Host range of Rhizoctonia solani, the incitant of sheath blight disease of rice. Indian J Plant Prot 26:62–63
Meena B, Ramamoorthy V, Banu V, Thangavelu JG, Muthusamy M (2000) Screening of rice genotypes against sheath blight disease. J Ecobiol 12:103–109
Mew TW, Fabellar NG, Elazegi FA (1980) Ecology of the rice sheath blight pathogen: parasitic survival. Int Rice Res Newsl 6:16
Mew TW, Leung H, Savary S, Vera Cruz CM, Leach JE (2004) Looking ahead in rice disease research and management. CRC Crit Rev Plant Sci 23:103–127
Mgonja AP, Lee FN, Courtney M (1987) Sclerotia distribution of Rhizoctonia solani and its relation to sheath blight (ShB) in Arkansas rice fields. Int Rice Res Newsl 11:20–21
Mohanta BK, Alam MR, Anam MK, Habib MA, Alam MM (2002) Reaction of some hybrid germplasms to three minor diseases of rice. Pak J Plant Pathol 1:36–39
Mosaddeque HQM, Talukder MI, Islam MM, Amin AKM, Alam MA (2008) Screening of some restorer and maintainer hybrid rice lines against sheath blight (Rhizoctoni solani). J Soil Nat 2:23–29
Mosajo M, Rush MC, Hoff BJ, Mcllrath WO (1979) Evaluating rice for resistance to rice sheath blight. Proc Am Phytopathol Soc 3:206
Nandakumar R, Babu S, Kalpana K, Raguchander T, Balasubramanian P, Samiyappan R (2007) Agrobacterium-mediated transformation of indica rice with chitinase gene for enhanced sheath blight resistance. Biol Plant 51:142–148
Neuhaus JM (1999) Plant chitinases. In: Muthukrishnan S, Datta SK (eds) Pathogenesis-related proteins in plants. CRC Press, Washington D.C., pp 77–104
Oster JJ (1992) Reaction of a resistant breeding line and susceptible California rice cultivars to Sclerotium oryzae. Plant Dis 76:740–744
Ou SH (1985) Rice diseases, 2nd edn. Commonwealth Mycological Institute, Surrey
Pan XB, Rush MC, Sha XY, Xie QJ, Linscombe SD, Stetina SR, Oard JH (1999a) Major gene, non-allelic sheath blight resistance from the rice cultivars Jasmine 85 and Teqing. Crop Sci 39:338–346
Pan XB, Zou JH, Chen ZX, Lu JF, Yu HX, Li HT, Wang ZB, Pan XY, Rush MC, Zhu LH (1999b) Tagging major quantitative trait loci for sheath blight resistance in a rice variety, Jasmine 85. Chin Sci Bull 44:1783–1789
Parlevliet JE (1979) Components of resistance that reduce the rate of epidemic development. Annu Rev Phytopathol 17:203–222
Patkar RN, Chattoo BB (2006) Transgenic indica rice expressing ns-LTP-like protein shows enhanced resistance to both fungal and bacterial pathogens. Mol Breed 17:159–171
Pinson SRM, Capdevielle FM, Oard JH (2005) Confirming QTLs and finding additional loci conditioning sheath blight resistance in rice using recombinant inbred lines. Crop Sci 45:503–510
Pinson SRM, Oard JH, Groth D, Miller R, Marchetti MA, Shank AR, Jia MH, Jia Y, Fjellstrom RG, Li Z (2008) Registration of TIL:455, TIL:514, and TIL:642, Three rice germplasm lines containing introgressed sheath blight resistance alleles. J Plant Regist 2(3):251–254
Poland JA, Balint-Kurti PJ, Wisser RJ, Pratt RC, Nelson RJ (2009) Shades of gray: the world of quantitative disease resistance. Trends Plant Sci 14:21–29
Prasad B, Eizenga GC (2008) Rice sheath blight disease resistance identified in Oryza spp. accessions. Plant Dis 92:1503–1509
Rafalski JA (2002) Novel genetic mapping tools in plants: SNPs and LD-based approaches. Plant Sci 162:329–333
Raina GL, Sidu JS, Bharaj TS, Gautam RK, Vir Om (1999) Multiple disease resistance in rice. Crop Improv 26:63–65
Raj RB, Wahab T, Rao GV, Rao AS, Reddy TCV (1987) Evaluation of rice cultures against bacterial blight and sheath blight diseases. Indian Phytopathol 40:397–399
Rajan KM, Nair PV (1979) Reaction of certain rice varieties to sheath blight and sheath rot diseases. Agric Res J Kerala (India) 17:259–260
Ram T, Ansari MM (1990) Preliminary screening of rice cultures against major diseases. J Andaman Sci Assoc 15:112–114
Ram T, Majumder ND, Laha GS, Ansari MM, Kar CS, Mishra B (2008) Identification of donors for sheath blight resistance in wild species of rice. Indian J Genet Plant Breed 68:317–319
Roy AK (1977) Screening of rice cultures against sheath-blight. Indian J Agric Sci 47(5):259–260
Roy AK (1986) Survival of sclerotia of Rhizoctonia solani f. sp. sasakii in relation to moisture regime of soil. Indian Phytopathol 39:125–130
Sato H, Ideta O, Ando I, Kunihiro Y, Hirabayashi H, Iwano M, Miyasaka A, Nemoto H, Imbe T (2004) Mapping QTLs for sheath blight resistance in the rice line WSS2. Breed Sci 54:265–271
Savary S, Mew TW (1996) Analyzing crop losses due to Rhizoctonia solani: rice sheath blight, a case study. In: Sneh B, Jabaji-Hare S, Neate S, Dijst G (eds) Rhizoctonia species: taxonomy, molecular biology, ecology, pathology and disease control. Kluwer, Dordrecht, pp 237–244
Savary S, Castilla NP, Elazegui FA, McLaren CG, Ynalvez MA, Teng PS (1995) Direct and indirect effects of nitrogen supply and disease source structure on rice sheath blight spread. Phytopathology 85:959–965
Savary S, Willocquet L, Teng PS (1997) Modelling sheath blight epidemics on rice tillers. Agric Syst 55:359–384
Savary S, Willocquet L, Elazegui FA, Csatilla N, Teng PS (2000) Rice pest constraints in tropical Asia: quantification and yield loss due to rice pests in a range of production situations. Plant Dis 84:357–369
Savary S, Castilla N, Willocquet L (2001) Analysis of the spatiotemporal structure of rice sheath blight epidemics in a farmer’s field. Plant Pathol 50:53–68
Savary S, Teng PS, Willocquet L, Nutter FW Jr (2006) Quantification and modeling of crop losses: a review of purposes. Annu Rev Phytopathol 44:89–112
Sha XY, Zhu LH (1990) Resistance of some rice varieties to sheath blight (ShB). Int Rice Res Newsl 15:7–8
Shah JM, Raghupathy V, Veluthambi K (2009) Enhanced sheath blight resistance in transgenic rice expressing an endochitinase gene from Trichoderma virens. Biotechnol Lett 31:239–244
Sharma A, McClung AM, Pinson SRM, Kepiro JL, Shank AR, Tabien RE, Fjellstrom R (2009) Genetic mapping of sheath blight resistance QTL within tropical japonica rice cultivars. Crop Sci 49:256–264
Shrestha CL, Oña I, Muthukrishnan S, Mew TW (2008) Chitinase levels in rice cultivars correlate with resistance to the sheath blight pathogen Rhizoctonia solani. Eur J Plant Pathol 120:69–77
Singh R, Dodan DS (1995) Reactions of rice genotypes to bacterial leaf blight, stem rot, and sheath blight in Haryana. Indian J Mycol Plant Pathol 25:224–227
Singha KD, Borah P (2000) Screening of local upland cultivars of Assam against sheath blight. Ann Biol 16:161–162
Singha KD, Pathak PK (1998) Evaluation of aromatic and semi-glutinous rice germplasm of Assam for resistance against rice diseases. Oryza 35:87–88
Singha KD, Borkakot RP, Pathak AK (2000) Evaluation of rice for disease resistance against bacterial blight, sheath blight and grain discoloration. Ann Biol 16:163–166
Slaton NA, Cartwright RD, Meng J, Gbur EE Jr, Norman RJ (2002) Sheath blight severity and rice yield as affected by nitrogen fertilizer rate, application method, and fungicide. Agron J 95:1489–1496
Sridevi G, Sabapathi N, Meena P, Nandakumar R, Samiyappan R, Muthukrishnan S, Veluthambi K (2003) Transgenic indica rice variety Pusa Basmati 1 constitutively expressing a rice chitinase gene exhibits enhanced resistance to Rhizoctonia solani. J Plant Biochem Biotechnol 12:93–101
Sridevi G, Parameswari C, Sabapathi N, Raghupathy V, Veluthambi K (2008) Combined expression of chitinase and β-1,3-glucanase genes in indica rice (Oryza sativa L.) enhances resistance against Rhizoctonia solani. Plant Sci 175:283–290
Srinivasachary, Gosman N, Steed N, Simmonds J, Leverington-Waite M, Wang Y, Snape J, Nicholson P (2008) Susceptibility to Fusarium head blight is associated with the Rht-D1b semi-dwarfing allele in wheat. Theor Appl Genet 116:1145–1153
Sripriya R, Raghupathy V, Veluthambi K (2008) Generation of selectable marker-free sheath blight resistant transgenic rice plants by efficient co-transformation of a cointegrate vector T-DNA and a binary vector T-DNA in one Agrobacterium tumefaciens strain. Plant Cell Rep 27:1635–1644
Tan GJ, Wang ZY (2002) Temporal and spatial niches of rice sheath blight. Chin J Rice Sci 16:182–184
Tan GJ, Ding KJ, Ji BH (1995) Effects of main culture factors on development of rice sheath blight. Plant Prot 21:7–10
Tan CX, Ji XM, Yang Y, Pan XY, Zuo SM, Zhang YF, Zou JH, Chen ZX, Zhu LH, Pan XB (2005) Identification and marker-assisted selection of two major quantitative genes controlling rice sheath blight resistance in backcross generations. Acta Genet Sin 32:6
Tang Q, Peng S, Buresh RJ, Zou Y, Castilla NP, Mew TW, Zhong X (2007) Rice varietal difference in sheath blight development and its association with yield loss at different levels of N fertilization. Field Crops Res 102:219–227
Temnykh S, DeClerck G, Lukashova A, Lipovich L, Cartinhour S, McCouch SR (2001) Computational and experimental analysis of microsatellites in rice (Oryza sativa L.): frequency, length variation, transposon associations, and genetic marker potential. Genome Res 11:1441–1452
Teng PS, Torries CQ, Nuque FL, Calvero SB (1990) Current knowledge on crop losses in tropical rice. In: IRRI (ed) Crop loss assessment in rice. International Rice Research Institute, Los Baños, pp 39–54
Thomson MJ, Ismail AM, McCouch SR, Mackill DJ (2010) Marker assisted breeding. In: Pareen A, Sopory SK, Bohner HJ, Govindjee (eds) Abiotic stress adaptation in plants: physiological, molecular and genomic foundation. Springer SBM, Dordrecht, pp 451–469
Thongjuea S, Ruanjaichon V, Bruskiewich R, Vanavichit A (2009) RiceGeneThresher: a web-based application for mining genes underlying QTL in rice genome. Nucleic Acids Res 37:D996–D1000
Uchimiay H, Iwata M, Nojiri C, Samarajeewa PK, Takasatsu S, Ooba S, Anzai H, Christensen AH, Quail PH, Toki S (1993) Bialaphos treatment of transgenic rice plants expressing a bar gene prevents infection by the sheath blight pathogen (Rhizoctonia solani). Nat Biotechnol 11:835–836
Van Loon LC, Van Strien EA (1999) The families of pathogenesis-related proteins, their activities, and comparative analysis of PR-1 type proteins. Physiol Mol Plant Pathol 55:85–97
van Oijen M (1992) Evaluation of breeding strategies for resistance and tolerance to late blight in potato by means of simulation. Neth J Plant Pathol 98:3–11
Varshney R (2010) Gene-based marker systems in plants: high throughput approaches for marker discovery and genotyping. In: Jain SM, Brar DS (eds) Molecular techniques in crop improvement, 2nd edn. Springer SBM, Dordrecht, pp 119–142
Voorrips RE (2002) MapChart: software for the graphical presentation of linkage maps and QTLs. J Hered 93:77–78
Wamishe YA, Jia Y, Singh P, Cartwright RD (2007) Identification of field isolates of Rhizoctonia solani to detect quantitative resistance in rice under greenhouse conditions. Front Agric China 1:61–367
Willocquet L, Fernandez L, Savary S (2000) Effect of various crop establishment methods practiced by Asian farmers on epidemics of rice sheath blight caused by Rhizoctonia solani. Plant Pathol 49:346–354
Wittenberg AHJ, van der Lee T, Cayla C, Kilian A, Visser RGF, Schouten HJ (2005) Validation of the high-throughput marker technology DArT using the model plant Arabidopsis thaliana. Mol Genet Genomics 274:30–39
Wu YL (1971) Varietal differences in sheath blight resistance of rice obtained in Southern Taiwan. SABRAO Newsl 3:5
Wu JL, Wu CJ, Lei CL, Baraoidan M, Bordeos A, Madamba MRS, Ramos-Pamplona M, Mauleon R, Portugal A, Ulat VJ, Bruskiewich R, Wang GL, Leach J, Khush G, Leung H (2005) Chemical- and irradiation-induced mutants of indica rice IR64 for forward and reverse genetics. Plant Mol Biol 59:85–97
Xie QJ, Linscombe SD, Rush MC, Jodarikarimi F (1992) Registration of LSBR-33 and LSBR-5 sheath blight resistant germplasm lines of rice. Crop Sci 32(2):507
Yin X, Struik PC, Kropff MJ (2004) Role of crop physiology in predicting gene-to-phenotype relationships. Trends Plant Sci 9:427–432
Yin Y, Zuo S, Wang H, Chen Z, Gu S, Zhang Y, Pan X (2009) Evaluation of the effect of qSB-9Tq involved in quantitative resistance to rice sheath blight using near-isogenic lines. Can J Plant Sci 89:731–737
Yu JM, Pressoir G, Briggs WH, Bi IV, Yamasaki M, Doebley JF, McMullen MD, Gaut BS, Nielsen DM, Holland JB, Kresovich S, Buckler ES (2006) A unified mixed-model method for association mapping that accounts for multiple levels of relatedness. Nat Genet 38:203–208
Yuen JE, Forbes GA (2009) Estimating the level of susceptibility to Phythophtora infestans in potato genotypes. Phytopathology 99:782–786
Zadoks JC (1972) Methodology in epidemiological research. Annu Rev Phytopathol 10:253–276
Zadoks JC, Schein RD (1979) Epidemiology and plant disease management. Oxford University Press, New York, p 427
Zhan QC, Che KP, Wang ZP, He DY, Jin DM, Wang B (2001) Novel rice variety development for sheath blight resistance by transferring nuclear DNA of Zizania caduciflora into rice cultivar. Chin Sci Abstr 7:665
Zou JH, Pan XB, Chen ZX, Xu JY, Lu JF, Zhai WX, Zhu LH (2000) Mapping quantitative trait loci controlling sheath blight resistance in two rice cultivars (Oryza sativa L.). Theor Appl Genet 101:569–573
Zuo S, Zhang L, Wang H, Yin Y, Zhang Y, Chen Z, Ma Y, Pan X (2008) Prospect of the QTL-qSB-9Tq utilized in molecular breeding program of japonica rice against sheath blight. J Genet Genomics 35:499–505
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This work was partly supported by the Bill and Melinda Gates Foundation, under the Cereal System Initiative for South Asia Project (Grant no. 52303).
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Srinivasachary, Willocquet, L. & Savary, S. Resistance to rice sheath blight (Rhizoctonia solani Kühn) [(teleomorph: Thanatephorus cucumeris (A.B. Frank) Donk.] disease: current status and perspectives. Euphytica 178, 1–22 (2011). https://doi.org/10.1007/s10681-010-0296-7
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DOI: https://doi.org/10.1007/s10681-010-0296-7