Skip to main content
Log in

Exploitation of bacterial pectinolytic strains for improvement of hemp water retting

  • Published:
Euphytica Aims and scope Submit manuscript

Summary

Retting is the major limitation to an efficient production of textile hemp fibres. Traditional retting has been carried out by autochthonous bacterial community. Aerobic and anaerobic pectinolytic strains were isolated from hemp or flax sources and characterised. Anaerobic pectinolytic strains had a wide range of acid polygalacturonase (PG) activity, whereas aerobic isolates did not produce any acid PG activity, but only an alkalophylic one, suggesting they could play a minor role in the retting process, except in the early stages. Analysis of 16S rDNA sequences assigned anaerobic strains to the Clostridium genus and aerobic isolates to the Bacillus and Paenibacillus genus. C. felsineum and C. acetobutylicum were confirmed as the main anaerobic agents. Nevertheless, a high proportion of anaerobic and aerobic pectinolytic strains was assigned to C. saccharobutylicum and B. pumilus, respectively, both species never being described as involved in water retting. Anaerobic and aerobic strains with high PG activity were selected and characterized. PG activity is well correlated with the strain retting efficiency and improvement of the process was obtained by inoculating the retting water with spores of selected aerobic and anaerobic bacteria. An advisable feature of retting strains is the absence of cellulosolytic activity. An aerobic strain with no cellulosolytic activity was identified. In contrast, all the anaerobic isolates showed cellulosolytic activity. Mutagenesis was ineffective for selection of Cel-Pec+ mutants. Localization of the C. felsineum L1/6 PG activity was investigated.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Akin, D.E., J.A. Foulk, R.B. Dodd & D.D. McAlister, 2001. Enzyme-retting of flax and characterization of processed fibres. J Biotechnol 89: 193–203.

    Article  PubMed  CAS  Google Scholar 

  • Akin, D.E., L.L. Rigsby, G. Henrikson & K.E.L. Eriksson, 1998. Structural effects on flax stems of three potential retting fungi. Textile Res J 68: 515–519.

    Article  CAS  Google Scholar 

  • Altschul, S.F., W. Gish, W. Miller, E.W. Myers & D.J. Lipman, 1990. Basic local alignment search tool. J Mol Biol 215: 403–410.

    Article  CAS  PubMed  Google Scholar 

  • Chesson, A., 1978. The maceration of linen flax under anaerobic conditions. J Appl Bacteriol 45: 219–230.

    CAS  Google Scholar 

  • Di Candilo, M., P. Ranalli, C. Bozzi, B. Focher & G. Mastromei, 2000. Preliminary results of tests facing with the controlled retting of hemp. Ind Crops Prod 11: 197–203.

    Article  Google Scholar 

  • Doi, R.H., A. Kosugi, K. Murashima, Y. Tamaru & S.O. Han, 2003. Cellulosomes from mesophilic bacteria. J Bacteriol 185: 5907–5914.

    Article  PubMed  CAS  Google Scholar 

  • Donaghy, J.A., P.N. Levette & R.W. Haylock, 1990. Changes in microbial populations during anaerobic flax retting. J Appl Bacteriol 69: 634–641.

    Google Scholar 

  • Dujardin, A., 1948. The Retting of Flax, Carsewell, Belfast, UK.

    Google Scholar 

  • Grifoni, A., M. Bazzicalupo, C. Di Serio, S. Fancelli & R. Fani, 1995. Identification of Azospirillum strains by restriction fragment length polymorphism of the 16S rDNA and of the histidine operon. FEMS Microbiol Lett 127: 85–91.

    Article  PubMed  CAS  Google Scholar 

  • Henriksson, G., D.E. Akin, R.T. Hanlin, C. Rodriguez, D.D. Archibald, L.L. Rigsby & K.L. Eriksson, 1997. Identification and retting efficiencies of fungi isolated from dew-retted flax in the United States and Europe. Appl Environ Microbiol 63: 3950–3956.

    PubMed  CAS  Google Scholar 

  • Henriksson, G., K.E.L. Eriksson, L. Kimmel & D.E. Akin, 1998. Chemical/physical retting of flax using detergent and oxalic acid at high pH. Text Res J 68: 942–947.

    Article  CAS  Google Scholar 

  • Heyndrickx, M., K. Vandemeulebroecke, P. Scheldeman, K. Kersters, P. de Vos, N.A. Logan, A.M. Aziz, N. Ali & R.C. Berkeley, 1996. A polyphasic reassessment of the genus Paenibacillus, reclassification of Bacillus lautus (Nakamura, 1984) as Paenibacillus lautus comb. nov. and of Bacillus peoriae (Montefusco et al., 1993) as Paenibacillus peoriae comb. nov., and emended descriptions of P. lautus and of P. peoriae. Int J Syst Bacteriol 46: 988– 1003.

    Article  PubMed  CAS  Google Scholar 

  • Keis, S., R. Shaheen & D.T. Jones, 2001. Emended descriptions of Clostridium acetobutylicum and Clostridium beijerinckii, and descriptions of Clostridium saccharoperbutylacetonicum sp. nov. and Clostridium saccharobutylicum sp. nov. Int J Syst Evol Microbiol 51: 2095–2103.

    PubMed  CAS  Google Scholar 

  • Kobayashi, T., N. Higaki, A. Suzumatsu, K. Sawada, H. Hagihara, S. Kawai & S. Ito, 2001. Purification and properties of a high-molecular-weight, alkaline exopolygalacturonase from a strain of Bacillus. Enzyme Microb Technol 5: 70–75.

    Article  Google Scholar 

  • Maidak, B.L., J.R. Cole, T.G. Lilburn, C.T. Parker Jr, P.R. Saxman, R.J. Farris, G.M. Garrity, G.J. Olsen, T.M. Schmidt & J.M. Tiedje, 2001. The RDP-II (Ribosomal Database Project). Nucleic Acids Res 29: 173–174.

    Article  CAS  PubMed  Google Scholar 

  • Miller, G.L., 1959. Use of dinitrosalicylic acid reagent for determination of reducing sugar. Anal Chem 31: 426–428.

    Article  CAS  Google Scholar 

  • Miller, G.L., R. Blum, W.E. Glennon & A. Burton, 1960. Measurement of carboxymethylcellulase activity. Anal Biochem 2: 127–132.

    Article  Google Scholar 

  • Noelling, J., G. Breton, M.V. Omelchenko, K.S. Makarova, Q. Zeng, R. Gibson, H.M. Lee, J. Dubois, D. Qiu, J. Hitti, Y.I. Wolf, R.L. Tatusov, F. Sabathe, L. Doucette-Stamm, P. Soucaille, M.J. Daly, G.N. Bennett, E.V. Koonin & D.R. Smith, 2001. Genome sequence and comparative analysis of the solvent-producing bacterium Clostridium acetobutylicum. J Bacteriol 183: 4823– 4838.

    Article  CAS  PubMed  Google Scholar 

  • Pallesan, B.E., 1996. The quality of combine-harvested fibre flax for industrials purposes depends on the degree of retting. Ind Crops Prod 5: 65–78.

    Article  Google Scholar 

  • Picard, C., F. Di Cello, M. Ventura, R. Fani & A. Guckert, 2000. Frequency and biodiversity of 2,4-diacetylphloroglucinol-producing bacteria isolated from the maize rhizosphere at different stages of plant growth. Appl Environ Microbiol 66: 948–955.

    Article  PubMed  CAS  Google Scholar 

  • Pukall, R., I. Kramer, M. Rohde & E. Stackebrandt, 2001. Microbial diversity of cultivatable bacteria associated with the North Sea bryozoan Flustra foliacea. Syst Appl Microbiol 24: 623– 633.

    Article  PubMed  CAS  Google Scholar 

  • Sharma, H.S.S. & C.F. Van Sumere, 1992. Enzyme treatment of flax. Genetic Eng Biotechnol 12: 19–23.

    CAS  Google Scholar 

  • Tamaru, Y. & R. H. Doi, 2001. Pectate lyase A, an enzymatic subunit of the Clostridium cellulovorans cellulosome. Proc Natl Acad Sci U S A 98: 4125–4129.

    Article  PubMed  CAS  Google Scholar 

  • Tamburini, E., S. Daly, U. Steiner, C. Vandini & G. Mastromei, 2001. Clostridium felsineum and Clostridium acetobutylicum are two distinct species phylogenetically closely related. Int J Syst Evol Microbiol 51: 963–966.

    PubMed  CAS  Google Scholar 

  • Tamburini, E., A. Gordillo León, B. Perito & G. Mastromei, 2003. Characterization of bacterial pectinolytic strains involved in the water retting process. Environ Microbiol 5: 730–736.

    Article  PubMed  CAS  Google Scholar 

  • Van Sumere, C.F., 1992. Retting of flax with special reference to enzyme-retting. In: H.S.S. Sharma & S.F. Van Sumere (Eds.), The Biology and Processing of Flax, pp. 157–198. M. Publications, Belfast, Northern Ireland.

    Google Scholar 

  • Vaneechoutte, M., R. Rossau, P. De Vos, M. Gillis, D. Janssens, N. Paepe, A. De Rouck, T. Fiers, G. Claeys & K. Kerster, 1992. Rapid identification of bacteria of the Comamonadaceae with amplified ribosomal DNA-restriction analysis (ARDRA). FEMS Microbiol Lett 93: 227–234.

    Article  CAS  Google Scholar 

  • Zhang, J., G. Henriksson & G. Johansson, 2000. Polygalacturonase is the key component in enzymatic retting of flax. J Biotechnol 81: 85–89.

    Article  PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Giorgio Mastromei.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Tamburini, E., León, A.G., Perito, B. et al. Exploitation of bacterial pectinolytic strains for improvement of hemp water retting. Euphytica 140, 47–54 (2004). https://doi.org/10.1007/s10681-004-4754-y

Download citation

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10681-004-4754-y

Key words

Navigation