Abstract
Tree decline is a highly complex process and is inherently a function of manifold climatic, physiologic, and anthropogenic factors. Monitoring decline processes and their underlying dynamics primarily entails identifying their location and intensity across different ecosystems, for which airborne and satellite remote sensing approaches offer cost-effective and spatially explicit alternatives to field methods. Consumer-grade unmanned aerial vehicles (UAVs) can barely be used as standalone means for large-area monitoring due to their constrains in spatial and spectral domains. However, they could effectively be integrated alongside satellite data to unlock their information for subsequent upscaling on landscape level. We designed a novel two-step workflow to describe the severity of tree decline by linking UAV-RGB information to space-borne multispectral and digital elevation model (DEM) data over 15 forest sites dominated by Persian oak across the latitudinal gradient of Zagros Forests in western Iran. We display how to 1) leverage UAV as reference data across multiple structurally different Persian oak-dominated sites in semi-arid Zagros mountains of Iran; 2) link UAV, Copernicus DEM, and Sentinel-2 data to retrieve decline information within a model-driven context; and 3) analyze the sensitivity of models by means of a global variance-based sensitivity analysis. Results suggested a high association between UAV and field data on the intensity of decline, which enabled using sampled UAV data as reference to estimate the decline severity using space-borne data by means of semi-parametric generalized additive model (GAM) and non-parametric random forest (RF) approaches. Conclusively, this study provided a baseline for multi-scale analysis of tree decline using budget and partially free data sources, which can be of high scientific and practical assets for monitoring in remote, sparse, mountainous, and continuously degrading forest areas.
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References
Allen, C. D., Macalady, A. K., Chenchouni, H., Bachelet, D., McDowell, N., Vennetier, M., Kitzberger, T., Rigling, A., Breshears, D. D., Hogg, E. H., Gonzalez, P., Fensham, R., Zhang, Z., Castro, J., Demidova, N., Lim, J. H., Allard, G., Running, S. W., Semerci, A., & Cobb, N. (2010). A global overview of drought and heat-induced tree mortality reveals emerging climate change risks for forests. Forest Ecology and Management, 259, 660–684.
Jordan, M. O. (2015). C depletion and tree dieback in young peach trees: A possible consequence of N shortage? Annals of forest science, 72(5), 529–537. https://doi.org/10.1007/s13595-015-0466-9
Mueller-Dombois, D. (1988). Forest decline and dieback—a global ecological problem. Trends in Ecology & Evolution, 3(11), 310–312. https://doi.org/10.1016/0169-5347(88)90108-5
Smith, W. H. (1990). Forest dieback/decline: a regional response to excessive air pollution exposure. Air pollution and forests (pp. 501–524). New York, NY: Springer. https://doi.org/10.1007/978-1-4612-3296-4_18
Franklin, J. F., Shugart, H. H., & Harmon, M. E. (1987). Tree death as an ecological process. BioScience, 37(8), 550–556.
Sevanto, S., Mcdowell, N. G., Dickman, L. T., Pangle, R., & Pockman, W. T. (2014). How do trees die? A test of the hydraulic failure and carbon starvation hypotheses. Plant, cell & environment, 37(1), 153–161. https://doi.org/10.1111/pce.12141
Attarod, P., Sadeghi, S. M. M., Pypker, T. G., & Bayramzadeh, V. (2017). Oak trees decline; a sign of climate variability impacts in the west of Iran. Caspian Journal of Environmental Sciences, 15(4), 373–384. https://doi.org/10.22124/cjes.2017.2662
Heitzman, E., Grell, A., Spetich, M., & Starkey, D. (2007). Changes in forest structure associated with oak decline in severely impacted areas of northern Arkansas. Southern Journal of Applied Forestry, 31(1), 17–22. https://doi.org/10.1093/sjaf/31.1.17
Johnson, P. S., Shifley, S. R., & Rogers, R. (2002). The ecology and silviculture of oaks (p. 503). New York: CABI Publishing.
Führer, E. R. W. I. N. (1998). Oak decline in Central Europe: a synopsis of hypotheses. Proceedings of population dynamics, impacts, and integrated management of forest defoliating insects. USDA Forest Service General Technical Report NE-247, 7–24.
Sohar, K., Helama, S., Läänelaid, A., Raisio, J., & Tuomenvirta, H. (2014). Oak decline in a southern Finnish forest as affected by a drought sequence. Geochronometria, 41(1), 92–103. https://doi.org/10.2478/s13386-013-0137-2
Thomas, F. M. (2008). Recent advances in cause-effect research on oak decline in Europe. CAB Reviews: Perspectives in Agriculture, Veterinary Science, Nutrition and Natural Resources, 3(37), 1–12.
Pourhashemi, M., & Sadeghi, S. M. M. (2020). A review on ecological causes of oak decline phenomenon in forests of Iran. Ecology of Iranian Forest, 8(16), 148–164. http://ifej.sanru.ac.ir/article-1-340-en.html
Rostamian, M. (2017). The relationship between oak charcoal disease (Biscogniauxia mediterranea) and borer beetles in the Zagros forests, Khorram Abad. Journal of Wood and Forest Science and Technology, 24(3), 110–142. https://doi.org/10.22069/jwfst.2017.12843.1662
Pourhashemi, M., Jahanbazi Goujani, H., Hoseinzadeh, J., Bordbar, S. K., Iranmanesh, Y., & Khodakarami, Y. (2017). The history of oak decline in Zagros forests. Iran Nature, 2(1), 37–30. https://doi.org/10.22092/irn.2017.109535
Alexander, J., & Lee, C. A. (2010). Lessons learned from a decade of sudden oak death in California: Evaluating local management. Environmental Management, 46(3), 315–328. https://doi.org/10.1007/s00267-010-9512-4
Fallah, A., & Haidari, M. (2018). Investigation of Oak decline in diameter classes in Sarab-Kazan forests of Ilam. Iranian Journal of Forest, 9(4), 499–510.
Asner, G. P., Nepstad, D., Cardinot, G., & Ray, D. (2004). Drought stress and carbon uptake in an Amazon forest measured with spaceborne imaging spectroscopy. Proceedings of the National Academy of Sciences, 101(16), 6039–6044. https://doi.org/10.1073/pnas.0400168101
Curran, P. J. (1989). Remote sensing of foliar chemistry. Remote sensing of environment, 30(3), 271–278. https://doi.org/10.1016/0034-4257(89)90069-2
Anderegg, W. R., Konings, A. G., Trugman, A. T., Yu, K., Bowling, D. R., Gabbitas, R., & Zenes, N. (2018). Hydraulic diversity of forests regulates ecosystem resilience during drought. Nature, 561(7724), 538–541. https://doi.org/10.1038/s41586-018-0539-7
Konings, A. G., Yu, Y., Xu, L., Yang, Y., Schimel, D. S., & Saatchi, S. S. (2017). Active microwave observations of diurnal and seasonal variations of canopy water content across the humid African tropical forests. Geophysical Research Letters, 44(5), 2290–2299. https://doi.org/10.1002/2016GL072388
White, J. C., Coops, N. C., Hilker, T., Wulder, M. A., & Carroll, A. L. (2007). Detecting mountain pine beetle red attack damage with EO-1 Hyperion moisture indices. International Journal of Remote Sensing, 28(10), 2111–2121. https://doi.org/10.1080/01431160600944028
Wulder, M. A., Dymond, C. C., White, J. C., Leckie, D. G., & Carroll, A. L. (2006). Surveying mountain pine beetle damage of forests: A review of remote sensing opportunities. Forest Ecology and management, 221(1–3), 27–41. https://doi.org/10.1016/j.foreco.2005.09.021
Rock, B. N., Hoshizaki, T., & Miller, J. R. (1988). Comparison of in situ and airborne spectral measurements of the blue shift associated with forest decline. Remote Sensing of Environment, 24(1), 109–127. https://doi.org/10.1016/0034-4257(88)90008-9
Huang, C. Y., Anderegg, W. R., & Asner, G. P. (2019). Remote sensing of forest die-off in the Anthropocene: From plant ecophysiology to canopy structure. Remote Sensing of Environment, 231, 111233. https://doi.org/10.1016/j.rse.2019.111233
Martin, R. E., Asner, G. P., Francis, E., Ambrose, A., Baxter, W., Das, A. J., & Stephenson, N. L. (2018). Remote measurement of canopy water content in giant sequoias (Sequoiadendron giganteum) during drought. Forest Ecology and Management, 419, 279–290. https://doi.org/10.1016/j.foreco.2017.12.002
Anderegg, W. R., Kane, J. M., & Anderegg, L. D. (2013). Consequences of widespread tree mortality triggered by drought and temperature stress. Nature climate change, 3(1), 30–36. https://doi.org/10.1038/nclimate1635
Huang, C. Y., & Anderegg, W. R. (2014). Vegetation, land surface brightness, and temperature dynamics after aspen forest die-off. Journal of Geophysical Research: Biogeosciences, 119(7), 1297–1308. https://doi.org/10.1002/2013JG002489
Gallego, F. J., De Algaba, A. P., & Fernandez-Escobar, R. (1999). Etiology of oak decline in Spain. European Journal of Forest Pathology, 29(1), 17–27. https://doi.org/10.1046/j.1439-0329.1999.00128.x
Goodwin, N. R., Coops, N. C., Wulder, M. A., Gillanders, S., Schroeder, T. A., & Nelson, T. (2008). Estimation of insect infestation dynamics using a temporal sequence of Landsat data. Remote sensing of environment, 112(9), 3680–3689. https://doi.org/10.1016/j.rse.2008.05.005
Skakun, R. S., Wulder, M. A., & Franklin, S. E. (2003). Sensitivity of the thematic mapper enhanced wetness difference index to detect mountain pine beetle red-attack damage. Remote Sensing of Environment, 86(4), 433–443. https://doi.org/10.1016/S0034-4257(03)00112-3
Stimson, H. C., Breshears, D. D., Ustin, S. L., & Kefauver, S. C. (2005). Spectral sensing of foliar water conditions in two co-occurring conifer species: Pinus edulis and Juniperus monosperma. Remote Sensing of Environment, 96(1), 108–118. https://doi.org/10.1016/j.rse.2004.12.007
Cook, B. D., Corp, L. A., Nelson, R. F., Middleton, E. M., Morton, D. C., McCorkel, J. T., Masek, J. G., Ranson, K. J., Ly, V., & Montesano, P. M. (2013). NASA Goddard’s LiDAR, hyperspectral and thermal (G-LiHT) airborne imager. Remote Sensing, 5, 4045.
Gamon, J. A., Penuelas, J., & Field, C. B. (1992). A narrow-waveband spectral index that tracks diurnal changes in photosynthetic efficiency. Remote Sensing of environment, 41(1), 35–44.
Ahern, F. J. (1988). The effects of bark beetle stress on the foliar spectral reflectance of lodgepole pine. International Journal of Remote Sensing, 9(9), 1451–1468. https://doi.org/10.1080/01431168808954952
Chavana‐Bryant, C., Malhi, Y., Wu, J., Asner, G. P., Anastasiou, A., Enquist, B. J., & Gerard, F. F. (2017). Leaf aging of Amazonian canopy trees as revealed by spectral and physiochemical measurements. New Phytologist, 214(3), 1049–1063. https://doi.org/10.1111/nph.13853
Zarco-Tejada, P. J., Hornero, A., Beck, P. S. A., Kattenborn, T., Kempeneers, P., & Hernández-Clemente, R. (2019). Chlorophyll content estimation in an open-canopy conifer forest with Sentinel-2A and hyperspectral imagery in the context of forest decline. Remote sensing of environment, 223, 320–335. https://doi.org/10.1016/j.rse.2019.01.031
Zakeri, S., & Fallah Shamsi, S. R. (2014). An investigation on Persian oak (Quercus brantii Lindl) single tree defoliation mapping, using rapid eye and ster-L1B satellite imageries. Iranian Journal of Forest, 5(4), 443–456.
Carlquist, S. (2001). Comparative Wood Anatomy. Springer.
Davari, M., Peyghami, E., Javanshir, A., & Ebrahimi, T. (2003). Investigating the causes of of oak decline (Quercus macranthera) in Hatam-Beyg Forest (Ghinraje). Meshkin Shahr. Agriculture Knowledge, 13(3), 1–14.
Hart, S. J., & Veblen, T. T. (2015). Detection of spruce beetle-induced tree mortality using high-and medium-resolution remotely sensed imagery. Remote Sensing of Environment, 168, 134–145. https://doi.org/10.1016/j.rse.2015.06.015
Fassnacht, F. E., Latifi, H., Ghosh, A., Joshi, P. K., & Koch, B. (2014). Assessing the potential of hyperspectral imagery to map bark beetle-induced tree mortality. Remote Sensing of Environment, 140, 533–548. https://doi.org/10.1016/j.rse.2013.09.014
Dash, J. P., Watt, M. S., Pearse, G. D., Heaphy, M., & Dungey, H. S. (2017). Assessing very high resolution UAV imagery for monitoring forest health during a simulated disease outbreak. ISPRS Journal of Photogrammetry and Remote Sensing, 131, 1–14. https://doi.org/10.1016/j.isprsjprs.2017.07.007
Puliti, S., Ene, L. T., Gobakken, T., & Næsset, E. (2017). Use of partial-coverage UAV data in sampling for large scale forest inventories. Remote Sensing of Environment, 194, 115–126. https://doi.org/10.1016/j.rse.2017.03.019
Wallace, L., Lucieer, A., Malenovský, Z., Turner, D., & Vopěnka, P. (2016). Assessment of forest structure using two UAV techniques: A comparison of airborne laser scanning and structure from motion (SfM) point clouds. Forests, 7(3), 62. https://doi.org/10.3390/f7030062
Michez, A., Piégay, H., Lisein, J., Claessens, H., & Lejeune, P. (2016). Classification of riparian forest species and health condition using multi-temporal and hyperspatial imagery from unmanned aerial system. Environmental monitoring and assessment, 188(3), 1–19. https://doi.org/10.1007/s10661-015-4996-2
Cardil, A., Vepakomma, U., & Brotons, L. (2017). Assessing pine processionary moth defoliation using unmanned aerial systems. Forests, 8(10), 402. https://doi.org/10.3390/f8100402
Yuan, C., Liu, Z., & Zhang, Y. (2017). Aerial images-based forest fire detection for firefighting using optical remote sensing techniques and unmanned aerial vehicles. Journal of Intelligent & Robotic Systems, 88(2), 635–654. https://doi.org/10.1007/s10846-016-0464-7
Mokroš, M., Výbošťok, J., Merganič, J., Hollaus, M., Barton, I., Koreň, M., & Čerňava, J. (2017). Early stage forest windthrow estimation based on unmanned aircraft system imagery. Forests, 8(9), 306. https://doi.org/10.3390/f8090306
Röder, M., Latifi, H., Hill, S., Wild, J., Svoboda, M., Brůna, J., & Heurich, M. (2018). Application of optical unmanned aerial vehicle-based imagery for the inventory of natural regeneration and standing deadwood in post-disturbed spruce forests. International Journal of Remote Sensing, 39(15–16), 5288–5309. https://doi.org/10.1080/01431161.2018.1441568
Yu, K., Hao, Z., Post, C. J., Mikhailova, E. A., Lin, L., Zhao, G., & Liu, J. (2022). Comparison of classical methods and mask R-CNN for automatic tree detection and mapping using UAV imagery. Remote Sensing, 14(2), 295. https://doi.org/10.3390/rs14020295
Ghasemi, M., Latifi, H., & Pourhashemi, M. (2022). A novel method for detecting and delineating coppice trees in UAV images to monitor tree decline. Remote Sensing, 14(23), 5910. https://doi.org/10.3390/rs14235910
Dash, J. P., Pearse, G. D., & Watt, M. S. (2018). UAV multispectral imagery can complement satellite data for monitoring forest health. Remote Sensing, 10(8), 1216. https://doi.org/10.3390/rs10081216
Fraser, R. H., Van der Sluijs, J., & Hall, R. J. (2017). Calibrating satellite-based indices of burn severity from UAV-derived metrics of a burned boreal forest in NWT. Canada. Remote Sensing, 9(3), 279. https://doi.org/10.3390/rs9030279
Puliti, S., Saarela, S., Gobakken, T., Ståhl, G., & Næsset, E. (2018). Combining UAV and Sentinel-2 auxiliary data for forest growing stock volume estimation through hierarchical model-based inference. Remote sensing of environment, 204, 485–497. https://doi.org/10.1016/j.rse.2017.10.007
Abdollahnejad, A., Panagiotidis, D., & Surový, P. (2018). Estimation and extrapolation of tree parameters using spectral correlation between UAV and Pléiades data. Forests, 9(2), 85. https://doi.org/10.3390/f9020085
Fassnacht, F. E., Schmidt-Riese, E., Kattenborn, T., & Hernández, J. (2021). Explaining Sentinel 2-based dNBR and RdNBR variability with reference data from the bird’s eye (UAS) perspective. International Journal of Applied Earth Observation and Geoinformation, 95, 102262. https://doi.org/10.1016/j.jag.2020.102262
Epstein, H. E., Raynolds, M. K., Walker, D. A., Bhatt, U. S., Tucker, C. J., & Pinzon, J. E. (2012). Dynamics of aboveground phytomass of the circumpolar Arctic tundra during the past three decades. Environmental Research Letters, 7(1), 015506. https://doi.org/10.1088/1748-9326/7/1/015506
Walker, D. A., Daniëls, F. J. A., Alsos, I., Bhatt, U. S., Breen, A. L., Buchhorn, M., & Webber, P. J. (2016). Circumpolar Arctic vegetation: a hierarchic review and roadmap toward an internationally consistent approach to survey, archive and classify tundra plot data. Environmental Research Letters, 11(5), 055005. https://doi.org/10.1088/1748-9326/11/5/055005
Tsai, C. H., & Lin, Y. C. (2017). An accelerated image matching technique for UAV orthoimage registration. ISPRS Journal of Photogrammetry and Remote Sensing, 128, 130–145. https://doi.org/10.1016/j.isprsjprs.2017.03.017
Kattenborn, T., Fassnacht, F. E., & Schmidtlein, S. (2019). Differentiating plant functional types using reflectance: Which traits make the difference? Remote Sensing in Ecology and Conservation, 5(1), 5–19. https://doi.org/10.1002/rse2.86
Hawryło, P., Bednarz, B., Wężyk, P., & Szostak, M. (2018). Estimating defoliation of Scots pine stands using machine learning methods and vegetation indices of Sentinel-2. European Journal of Remote Sensing, 51(1), 194–204. https://doi.org/10.1080/22797254.2017.1417745
Sadeghi, M., Malekian, M., & Khodakarami, L. (2017). Forest losses and gains in Kurdistan province, western Iran: Where do we stand? The Egyptian Journal of Remote Sensing and Space Science, 20(1), 51–59. https://doi.org/10.1016/j.ejrs.2016.07.001
FAO. (2015). Guide for country reporting for forest resource assessment (FRA) 2015. Retrieved February 23, 2021, from http://www.fao.org/forest-resources-assessment/past-assessments/fra-2015/en/
Ghazanfari, H., Namiranian, M., Sobhani, H., & Mohajer, R. M. (2004). Traditional forest management and its application to encourage public participation for sustainable forest management in the northern Zagros Mountains of Kurdistan Province. Iran. Scandinavian Journal of forest research, 19(S4), 65–71. https://doi.org/10.1080/14004080410034074
Jazirehi, M. H., & Ebrahimi, R. M., (2003). Silviculture in Zagros 1 University of Tehran 978-9640347584.
DJI. (2016). “Phantom 4 Pro user manual.” 69 p. Retrieved February 23, 2021, from https://www.dji.com/phantom-4pro/info#downloads
Agisoft. (2021). Agisoft Metashape user manual: professional edition, Version 1.7. Retrieved February 23, 2021, from https://www.agisoft.com/downloads/user-manuals/
Gitelson, A. A., Kaufman, Y. J., Stark, R., & Rundquist, D. (2002). Novel algorithms for remote estimation of vegetation fraction. Remote sensing of Environment, 80(1), 76–87. https://doi.org/10.1016/S0034-4257(01)00289-9
Zheng, H., Cheng, T., Zhou, M., Li, D., Yao, X., Tian, Y., & Zhu, Y. (2019). Improved estimation of rice aboveground biomass combining textural and spectral analysis of UAV imagery. Precision Agriculture, 20(3), 611–629. https://doi.org/10.1007/s11119-018-9600-7
Kataoka, T., Kaneko, T., Okamoto, H., & Hata, S. (2003). Crop growth estimation system using machine vision. Proceedings of the 2003 IEEE/ASME International Conference on Advanced Intelligent Mechatronics (pp. 1079–1083). Kobe, Japan.
Wan, L., Li, Y., Cen, H., Zhu, J., Yin, W., Wu, W., & He, Y. (2018). Combining UAV-based vegetation indices and image classification to estimate flower number in oilseed rape. Remote Sensing, 10(9), 1484. https://doi.org/10.3390/rs10091484
Latifi, H., Dahms, T., Beudert, B., Heurich, M., Kübert, C., & Dech, S. (2018). Synthetic RapidEye data used for the detection of area-based spruce tree mortality induced by bark beetles. GIScience & Remote Sensing, 55(6), 839–859. https://doi.org/10.1080/15481603.2018.1458463
Imanyfar, S., Hasanlou, M., & Mirzaei Zadeh, V. (2019). Mapping oak decline through long-term analysis of time series of satellite images in the forests of Malekshahi. Iran. International Journal of Remote Sensing, 40(23), 8705–8726. https://doi.org/10.1080/01431161.2019.1620375
Baret, F., & Guyot, G. (1991). Potentials and limits of vegetation indices for LAI and APAR assessment. Remote Sensing of Environment, 35(2–3), 161–173.
Guth, P. L., & Geoffroy, T. M. (2021). LiDAR point cloud and ICESat-2 evaluation of 1 second global digital elevation models: Copernicus wins. Transactions in GIS, 25(5), 2245–2261. https://doi.org/10.1111/tgis.12825
Butcher, B., & Smith, B. J. (2020). Feature engineering and selection: a practical approach for predictive models. Boca Raton, FL: Chapman & Hall/CRC Press. by Max Kuhn and Kjell Johnson 2019, xv+ 297 pp., $79.95 (H), ISBN: 978-1-13-807922-9.
Steyerberg, E. W., Eijkemans, M. J., & Habbema, J. D. F. (1999). Stepwise selection in small data sets: A simulation study of bias in logistic regression analysis. Journal of clinical epidemiology, 52(10), 935–942. https://doi.org/10.1016/S0895-4356(99)00103-1
Whittingham, M. J., Stephens, P. A., Bradbury, R. B., & Freckleton, R. P. (2006). Why do we still use stepwise modelling in ecology and behaviour? Journal of animal ecology, 75(5), 1182–1189. https://doi.org/10.1111/j.1365-2656.2006.01141.x
Akaike, H. (1974). A new look at the statistical model identification. IEEE transactions on automatic control, 19(6), 716–723.
Hastie, T. J., & Tibshirani, R. J. (1990). Generalized additive models. Chapman & Hall/CRC. ISBN 978–0–412–34390–2.
Wood, S. N. (2017). Generalized additive models: An introduction with R. CRC Press.
Rhys, H. (2020). Machine learning with R, the tidyverse, and mlr. Simon and Schuster.
Houborg, R., & McCabe, M. F. (2018). A hybrid training approach for leaf area index estimation via Cubist and random forests machine-learning. ISPRS Journal of Photogrammetry and Remote Sensing, 135, 173–188. https://doi.org/10.1016/j.isprsjprs.2017.10.004
Shah, S. H., Angel, Y., Houborg, R., Ali, S., & McCabe, M. F. (2019). A random forest machine learning approach for the retrieval of leaf chlorophyll content in wheat. Remote Sensing, 11(8), 920. https://doi.org/10.3390/rs11080920
Ramezan, A., & C., A Warner, T., & E Maxwell, A. (2019). Evaluation of sampling and cross-validation tuning strategies for regional-scale machine learning classification. Remote Sensing, 11(2), 185. https://doi.org/10.3390/rs11020185
Brenning, A. (2012, July). Spatial cross-validation and bootstrap for the assessment of prediction rules in remote sensing: the R package sperrorest. 2012 IEEE International Geoscience and Remote Sensing Symposium (pp. 5372–5375). IEEE. https://doi.org/10.1109/IGARSS.2012.6352393
Sexton, J. O., Song, X. P., Feng, M., Noojipady, P., Anand, A., Huang, C., & Townshend, J. R. (2013). Global, 30-m resolution continuous fields of tree cover: Landsat-based rescaling of MODIS vegetation continuous fields with lidar-based estimates of error. International Journal of Digital Earth, 6(5), 427–448. https://doi.org/10.1080/17538947.2013.786146
Willmott, C. J. (1982). Some comments on the evaluation of model performance. Bulletin of the American Meteorological Society, 63(11), 1309–1313. https://doi.org/10.1175/1520-0477(1982)063%3C1309:SCOTEO%3E2.0.CO;2
Sexton, J. O., Noojipady, P., Anand, A., Song, X. P., McMahon, S., Huang, C., & Townshend, J. R. (2015). A model for the propagation of uncertainty from continuous estimates of tree cover to categorical forest cover and change. Remote Sensing of Environment, 156, 418–425. https://doi.org/10.1016/j.rse.2014.08.038
Cameron, A. C., & Windmeijer, F. A. (1997). An R-squared measure of goodness of fit for some common nonlinear regression models. Journal of econometrics, 77(2), 329–342. https://doi.org/10.1016/S0304-4076(96)01818-0
Saltelli, A. (2000). What is sensitivity analysis? In A. Saltelli, K. Chan, & M. Scott (Eds.), Sensitivity analysis (p. 3e14). Chichester: Wiley.
Nossent, J., Elsen, P., & Bauwens, W. (2011). Sobol’sensitivity analysis of a complex environmental model. Environmental Modelling & Software, 26(12), 1515–1525. https://doi.org/10.1016/j.envsoft.2011.08.010
Sobol’, I. Y. M. (1990). On sensitivity estimation for nonlinear mathematical models. Matematicheskoe modelirovanie, 2(1), 112–118.
Tang, Y., Reed, P., Wagener, T., & Van Werkhoven, K. (2007). Comparing sensitivity analysis methods to advance lumped watershed model identification and evaluation. Hydrology and Earth System Sciences, 11(2), 793–817.
Pappenberger, F., Beven, K. J., Ratto, M., & Matgen, P. (2008). Multi-method global sensitivity analysis of flood inundation models. Advances in water resources, 31(1), 1–14. https://doi.org/10.1016/j.advwatres.2007.04.009
Cibin, R., Sudheer, K. P., & Chaubey, I. (2010). Sensitivity and identifiability of stream flow generation parameters of the SWAT model. Hydrological Processes: An International Journal, 24(9), 1133–1148. https://doi.org/10.1002/hyp.7568
Gränzig, T., Fassnacht, F. E., Kleinschmit, B., & Förster, M. (2021). Mapping the fractional coverage of the invasive shrub Ulex europaeus with multi-temporal Sentinel-2 imagery utilizing UAV orthoimages and a new spatial optimization approach. International Journal of Applied Earth Observation and Geoinformation, 96, 102281. https://doi.org/10.1016/j.jag.2020.102281
Riihimäki, H., Luoto, M., & Heiskanen, J. (2019). Estimating fractional cover of tundra vegetation at multiple scales using unmanned aerial systems and optical satellite data. Remote Sensing of Environment, 224, 119–132. https://doi.org/10.1016/j.rse.2019.01.030
Rhyma, P. P., Norizah, K., Hamdan, O., Faridah-Hanum, I., & Zulfa, A. W. (2020). Integration of normalised different vegetation index and soil-adjusted vegetation index for mangrove vegetation delineation. Remote Sensing Applications: Society and Environment, 17, 100280. https://doi.org/10.1016/j.rsase.2019.100280
Stone, C., & Mohammed, C. (2017). Application of remote sensing technologies for assessing planted forests damaged by insect pests and fungal pathogens: a review. Current Forestry Reports, 3, 75–92.
Pause, M., Schweitzer, C., Rosenthal, M., Keuck, V., Bumberger, J., Dietrich, P., & Lausch, A. (2016). In situ/remote sensing integration to assess forest health – a review. Remote Sensing, 8(6), 471. https://doi.org/10.3390/rs8060471
Vastaranta, M., Wulder, M. A., White, J. C., Pekkarinen, A., Tuominen, S., Ginzler, C., & Hyyppä, H. (2013). Airborne laser scanning and digital stereo imagery measures of forest structure: comparative results and implications to forest mapping and inventory update. Canadian Journal of Remote Sensing, 39(5), 382–395. https://doi.org/10.5589/m13-046
Finch, J. P., Brown, N., Beckmann, M., Denman, S., & Draper, J. (2021). Index measures for oak decline severity using phenotypic descriptors. Forest Ecology and Management, 485, 118948. https://doi.org/10.1016/j.foreco.2021.118948
Lussem, U., Bolten, A., Gnyp, M. L., Jasper, J., & Bareth, G. (2018). Evaluation of RGB-based vegetation indices from UAV imagery to estimate forage yield in grassland. International Archives of the Photogrammetry Remote Sensing and Spatial Information Sciences, 42, 1215–1219. https://doi.org/10.5194/isprs-archives-XLII-3-1215-2018
Zarco-Tejada, P. J., Hornero, A., Hernández-Clemente, R., & Beck, P. S. A. (2018). Understanding the temporal dimension of the red-edge spectral region for forest decline detection using high-resolution hyperspectral and Sentinel-2a imagery. ISPRS Journal of Photogrammetry and Remote Sensing, 137, 134–148. https://doi.org/10.1016/j.isprsjprs.2018.01.017
Haghighian, F., Yousefi, S., & Keesstra, S. (2022). Identifying tree health using sentinel-2 images: a case study on Tortrix viridana L. infected oak trees in Western Iran. Geocarto International, 37(1), 304–314. https://doi.org/10.1080/10106049.2020.1716397
Hoy, E. E., French, N. H., Turetsky, M. R., Trigg, S. N., & Kasischke, E. S. (2008). Evaluating the potential of Landsat TM/ETM+ imagery for assessing fire severity in Alaskan black spruce forests. International Journal of Wildland Fire, 17(4), 500–514. https://doi.org/10.1071/WF08107
Kattenborn, T., Lopatin, J., Förster, M., Braun, A. C., & Fassnacht, F. E. (2019). UAV data as alternative to field sampling to map woody invasive species based on combined Sentinel-1 and Sentinel-2 data. Remote sensing of environment, 227, 61–73. https://doi.org/10.1016/j.rse.2019.03.025
Louhaichi, M., Borman, M. M., & Johnson, D. E. (2001). Spatially located platform and aerial photography for documentation of grazing impacts on wheat. Geocarto International, 16(1), 65–70.
Xiaoqin, W., Miaomiao, W., Shaoqiang, W. and Yundong, W. (2015). Extraction of vegetation information from visible unmanned aerial vehicle images. Transactions of the Chinese Society of Agricultural Engineering, 31(5). https://doi.org/10.3969/j.issn.1002-6819.2015.05.022
Kawashima, S., & Nakatani, M. (1998). An algorithm for estimating chlorophyll content in leaves using a video camera. Annals of Botany, 81(1), 49–54. https://doi.org/10.1006/anbo.1997.0544
Bendig, J., Yu, K., Aasen, H., Bolten, A., Bennertz, S., Broscheit, J., & Bareth, G. (2015). Combining UAV-based plant height from crop surface models, visible, and near infrared vegetation indices for biomass monitoring in barley. International Journal of Applied Earth Observation and Geoinformation, 39, 79–87. https://doi.org/10.1016/j.jag.2015.02.012
Woebbecke, D. M., Meyer, G. E., Von Bargen, K., & Mortensen, D. A. (1995). Color indices for weed identification under various soil, residue, and lighting conditions. Transactions of the ASAE, 38(1), 259–269.
Tucker, C. J. (1979). Red and photographic infrared linear combinations for monitoring vegetation. Remote sensing of Environment, 8(2), 127–150. https://doi.org/10.1016/0034-4257(79)90013-0
Bannari, A., Morin, D., Bonn, F., & Huete, A. (1995). A review of vegetation indices. Remote sensing reviews, 13(1–2), 95–120.
Pinty, B., & Verstraete, M. M. (1992). GEMI: a non-linear index to monitor global vegetation from satellites. Vegetatio, 101, 15–20.
Haboudane, D., Miller, J. R., Tremblay, N., Zarco-Tejada, P. J., & Dextraze, L. (2002). Integrated narrow-band vegetation indices for prediction of crop chlorophyll content for application to precision agriculture. Remote Sensing of Environment, 81(2–3), 416–426.
Ceccato, P., Flasse, S., & Gregoire, J. M. (2002). Designing a spectral index to estimate vegetation water content from remote sensing data: part 2. Validation and applications. Remote Sensing of Environment, 82(2–3), 198–207.
Huete, A. R. (1988). A soil-adjusted vegetation index (SAVI). Remote sensing of environment, 25(3), 295–309. https://doi.org/10.1016/0034-4257(88)90106-X
Acknowledgements
The authors are grateful to diverse field crews in three provinces of Kermanshah, Chaharmahal-and-Bakhtiari, and Fars who collected the field data on oak decline. We are particularly grateful for the assistance of Dr. Yaghoub Iranmanesh, Dr. Hassan Jahanbazi, Dr. Seyed Kazem Bordbar, Dr. Mehrdad Zarafshar, and Mr. Habibollah Rahimi at the provincial bureaus of the Iranian Research Institute of Forests and Rangelands (RIFR), as well as our patient driver Mr. Qarliqi and our GPS assistants Mr. Bahavar and Mr. Sabaei. This research was conducted within the Research Lab “Remote Sensing for Ecology and Ecosystem Conservation (RSEEC)” of the KNTU (Link. https://www.researchgate.net/lab/Research-Lab-Remote-Sensing-for-Ecology-and-Ecosystem-Conservation-RSEEC-Hooman-Latifi).
Funding
The UAV and GPS measurement campaigns were logistically supported by the National Zagros Forests Monitoring Project of the RIFR (project no. 01–09-09–047-97012).
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M.G, H.L. and M.P. designed this research and the final version of the paper. M.G. implemented the methodology and carried out the data analysis. H.L. was the main point of contact for supervision, collected the input field as well as the UAV data across all sites and partially wrote and commented the manuscript. M.P was the main point of contact regarding oak decline, partially supervised the study and wrote the manuscript. All authors have read and agreed to the submitted version of the manuscript.
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Ghasemi, M., Latifi, H. & Pourhashemi, M. Integrating UAV and Freely Available Space-Borne Data to Describe Tree Decline Across Semi-arid Mountainous Forests. Environ Model Assess (2023). https://doi.org/10.1007/s10666-023-09911-3
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DOI: https://doi.org/10.1007/s10666-023-09911-3