Abstract
ʻBartlettʼ pear cultivar accounts for 40% of the pear production area of Río Negro and Neuquén provinces, Argentina. During fall and spring 2014–2016, symptoms associated with Phytophthora rots were observed in declining commercial orchards. The aims of this survey were: (i) to identify the Phytophthora species associated with these irrigated commercial orchards, using different isolation strategies; and (ii) to investigate the pathogenic potential of Phytophthora isolates on pear fruit and tree. Several strategies were used to isolate Phytophthora spp. from soil/roots and collar rot. Fifty-two isolates were grouped by morphological and cultural characters, corresponding mainly to P. cactorum and other species of Clade 6. P. cactorum was the main species obtained from collar wood and root/soil by fruit bating. The identity of the species was confirmed by sequencing of the internal transcriber spacers (ITS, ITS1, and ITS4 primers) and comparison with sequences available in GenBank and Phytophthora Database (http://phytophthoradb.org). Sequences of P. inundata, P. rosacearum, P. lacustris, P. termophila and P.cactorum were deposited in GenBank. Pathogenicity tests were made for each species on 1-year-old shoots and fruit of ʻBartlettʼ and ʻd’Anjouʼ cultivars, and then on 2-year-old rootstock roots of ʻBartlettʼ cultivar. All Phytophthora species were pathogenic, with different levels of severity among isolates. P. cactorum was the most aggressive species on pear rootstock roots and 1-year-old shoots.
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References
Abad, G. (2008). Methods for identification of Phytophthora species. WORKSHOP: Fighting Phytophthora: How to Detect, Investigate, and Manage Phytophthora. APS Cenntennial Meeting 2008.
Aldwinckle, H. S., Polach, F. J., Molin, W. T., & Pearson, R. C. (1975). Pathogenicity of Phytophthora cactorum isolates from New York apple trees and other sources. Phytopathology, 65, 989–994.
Belhaj, R., McComb, J., Burgess, T. I., & Hardy, G. E. S. (2017). Pathogenicity of 21 newly described Phytophthora species against seven Western Australian native plant species. Plant Pathology, 67(5), 1140–1149.
Bily, D. S., Diehl, S. V., Cook, M., Wallace, L. E., Sims, L. L., Watson, C., & Baird, R. E. (2018). Temporal and locational variations of a Phytophthora spp. Community in an urban forested water drainage and stream-runoff system. Southeastern Naturalist, 17(1), 176–201.
Brasier, C. M., Sanchez- Hernandez, E., & Kirk, S. A. (2003). Phytophthora inundata sp. nov., a part heterothallic pathogen of trees and shrubs in wet or flooded soils. Mycological Research, 107(4), 477–484.
Bruzone I. (2010). Pera. Análisis de la cadena alimentaria. Ministerio de Agricultura, ganadería y pesca - Secretaría de Agricultura, Ganadería, Pesca y Alimentos - Subsecretaría de Política Agropecuaria y Alimentos Dirección Nacional de Alimentos- Sector frutas. [on line] www.alimentosargentinos.gov.ar/0-3/revistas/r_32/cadenas/Frutas_Pera.html. Accessed 15 June 2013.
Bush, E. A., Hong, C. X., & Stromberg, E. L. (2003). Fluctuations of Phytophthora and Pythium spp. in components of a recycling irrigation system. Plant Disease, 87, 1500–1506.
Cacciola, S. O., Williams, N. A., Cooke, D. E. L., & Duncan, J. M. (2001). Molecular identification and detection of Phytophthora species on some important Mediterranean plants including sweet chestnut. Forest Snow and Landscape Research, 76, 351–356.
Cameron, H. R. (1960). Infection of pear roots with Phytophthora cinnamomi. Phytopathology, 50(9), 630.
Cameron, H. R. (1962). Susceptibility of pear roots to Phytophthora. Phytopathology, 52, 1295–1297.
Cooke, D. E., Drenth, A., Duncan, J. M., Wagels, G., & Brasier, C. M. (2000). A molecular phylogeny of Phytophthora and related oomycetes. Fungal Genetics and Biology, 30, 17–32.
Cooke, D. E., Schena, L., & Cacciola, S. O. (2007). Tools to detect, identify and monitor Phytophthora species in natural ecosystems. Journal of Plant Pathology, 89(1), 13–28.
Das, A. K., Nerkar, S., Kumar, A., & Bawage, S. (2016). Detection, identification and characterization of Phytophthora spp. Infecting citrus in India. Journal of Plant Pathology, 98(1), 55–59.
Dellaporta, S. L., Wood, J., & Hicks, J. B. (1983). A rapid method for DNA extraction from plant tissue. Plant Molecular Biology Reporter, 1, 19–21.
Dobra, A., Sosa, M. C., & Dussi, M. C. (2008). Low incidence of fungal and bacterial diseases in the pear production of North Patagonia, Argentina. Proc. of the 10th international pear Symposium.Ed: Webster-Oliveira ISHS. Acta Horticulturae, 800, 907–912.
Dobra, A. C., Sosa, M. C., Lutz, M. C., & Rodriguez, G. (2011). Fruit rot caused by Phytophthora sp. in cold-stored pears in the valley of Rio Negro and Neuquén, Argentina. Acta Horticulturae, (909), 505–510.
Elena, K., & Paplomatas, E. J. (1999). Collar rot caused by Phytophthora citrophthora on pear trees in Greece. Phytoparasitica, 27(4), 291–298.
Erwin, D. C., & Ribiero, O. K. (1996). Phytophthora diseases worldwide (p. 562). St. Paul, Minn, USA: The American Phytopathological Society.
Fitria, W., Suharjono, L., & Arumingtyas, E. L. (2013). Phylogenetic identification of pathogenic fungi from apple in Batu City, Malang, Indonesia. Advances in Microbiology, 3, 69–75.
Greslebin, A. G., & Hansen, E. M. (2010). Pathogenicity of Phytophthora austrocedrae on Austrocedrus chilensis and its relation with mal del ciprés in Patagonia. Plant Pathology, 59(4), 604–612.
Grove, G. G., & Boal, R. J. (1991). Influence of temperature and wetness duration on duration of immature apple and pear fruit by Phytophthora cactorum. Phytopathology, 81, 1465–1471.
Hansen, E. M., Brasier, C. M., Shaw, D. S., & Hamm, P. B. (1986). The taxonomic structure of Phytophthora megasperma: Evidence for emerging biological species groups. Transactions of the British Mycological Society, 87, 557–573.
Hansen, E. M., Wilcox, W. F., Reeser, P. W., & Sutton, W. (2009). Phytophthora rosacearum and P. sansomeana, new species segregated from the Phytophthora megasperma “complex”. Mycologia, 101, 129–135.
Harris, D. C. (1991). The Phytophthora diseases of apple. Review article. Journal of Horticultural Science, 66, 513–544.
Harris, D. C., & Bielenin, A. (1986). Evaluation of selective media and bait methods for estimating Phytophthora cactorum in apple orchards soils. Plant Pathology, 35, 565–574.
Jeffers, S. N., & Aldwinckle, H. S. (1987). Enhancing detection of Phytophthora cactorum in naturally infested soil. Phytopathology, 77, 1475–1482.
Jeffers, S. N., & Martin, S. B. (1986). Comparison of two media selective for Phytophthora and Pythium species. Plant Disease, 70, 1038–1043.
Jeffers, S. N., Aldwinckle, H. S., Burr, T. J., & Arneson, P. A. (1982). Phytophthora and Pythium species associated with crown rot in New York apple orchards. Phytopathology, 72(5), 533–538.
Jung, T., & Nechwatal, J. (2008). Phytophthora gallica sp. nov., a new species from rhizosphere soil of declining oak and reed stands in France and Germany. Mycological Research, 112, 1195–1205.
Jung, T., Cooke, D. E. L., Blaschke, H., Duncan, J. M., & Oßwald, W. (1999). Phytophthora quercina sp. nov., causing root rot of European oaks. Mycological Research, 103, 785–798.
Jung, T., Stukely, M. J. C., Hardy, G. E. S. J., White, D., Paap, T., Dunstan, W. A., & Burgess, T. I. (2011). Multiple new Phytophthora species from ITS clade 6 associated with natural ecosystems in Australia: Evolutionary and ecological implications. Persoonia, 26, 13–39.
Khan, J., Ooka, J. J., Miller, S. A., Madden, L. V., & Hoitink, H. A. J. (2004). Systemic resistance induced by Trichoderma hamatum 382 in cucumber against Phytophthora crown rot and leaf blight. Plant Disease, 88, 280–286.
Latorre, B. A., Rioja, M. E., & Wilcox, W. F. (2001). Phytophthora species associated with crown and root rot of apple in Chile. Plant Disease, 85, 603–606.
Martin, F. N., & Tooley, P. W. (2003). Phylogenetic relationships among Phytophthora species inferred from sequence analysis of mitochondrially encoded cytochrome oxidase I and II genes. Mycologia, 95(2), 269–284.
McIntosh, D. L. (1959). Collar rot of pear trees in British Columbia. Phytopathology, 49, 795–797.
McIntosh, D. L. (1964). Phytophthora spp. in soils of the Okanagan and Similkameen valleys of British Columbia. Canadian Journal of Botany, 42(10), 1411–1415.
McIntosh, D. L. (1966). The occurrence of Phytophthora spp. in irrigation systems in British Columbia. Canadian Journal of Botany, 44(12), 1591–1596.
Mclntosh, D. L. (1960). The infection of pear rootlets by Phytophthora cactorum. Plant Disease Report, 44, 262–264.
Mircetich, S. M., & Matheron, M. E. (1976). Phytophthora root and crown rot of cherry trees. Phytopathology, 66(5), 549–558.
Nagel, J. H., Gryzenhout, M., Slippers, B., Wingfield, M. J., Hardy, G. E. S. J., Stukely, M. J., & Burgess, T. I. (2013). Characterization of Phytophthora hybrids from ITS clade 6 associated with riparian ecosystems in South Africa and Australia. Fungal Biology, 117(5), 329–347.
Nakova, M. (2010). Monitoring of Phytophthora species on fruit trees in Bulgaria. European Journal of Plant Pathology, 128(4), 517–525.
Nechwatal, J., & Mendgen, K. (2006). Widespread detection of Phytophthora taxon Salixsoil in the littoral zone of Lake Constance, Germany. European Journal of Plant Pathology, 114, 261–264.
Nechwatal, J., Bakonyi, J., Cacciola, S. O., Cooke, D. E. L., Jun, T., Nagy, Z. A., Vannini, A., Vettraino, A. M., & Brasier, C. M. (2013). The morphology, behaviour and molecular phylogeny of Phytophthora taxon Salixsoil and its redesignation as Phytophthora lacustris sp. nov. Plant Pathology, 62, 355–369.
Perez-Sierra, A., López-García, C., León, M., García-Jiménez, J., Abad-Campos, P., & Jung, T. (2013). Previously unrecorded low-temperature Phytophthora species associated with Quercus decline in a Mediterranean forest in eastern Spain. Forest Pathology, 43, 331–339.
Rivero, V. I. (2010). Phytophthora cactorum: Caracterización, epidemiología e incidencia en la productividad y en la calidad de frutos de peral cv. Williams. Tesis para optar al grado académico de Magister Scientiae en fruticultura de clima templado-frío. 109 pp.
Rossini, M. (2013). Enfermedades de Malus domestica. In: Atlas fitopatológico INTA, Argentina.
Rossini, M., Dobra, A., & Di Masi, S. (1997). Las podredumbres radicales y del cuello en manzanos y perales en Alto Valle de Río Negro y Neuquén. Revista de Investigaciones Agropecuarias, 28, 73–79.
Sosa, M. C., Lutz, M. C., Velez, M. L., & Greslebin, A. G. (2015). Pre-harvest rot of pear fruits Golden Russet Bosc caused by Phytophthora lacustris and Phytophthora drechsleri in Argentina. Australasian Plant Disease Notes, 10(18), 1833–928X.
Sosa, M. C., Lutz, M. C., Sanchez, A., & Condoplo, N. (2016). Postharvest losses by complex of Phytophthora sp. and Botrytis cinerea in long storage pear fruit in the Northpatagonia, Argentina. Acta Horticulturae, 1144, 237–243.
Stukely, M. J. C., Webster, J. L., Ciampini, J. A., Brown, E., Dunstan, A., Hardy, G. E., Woodman, G. J., Davison, E. M., & Tay, F. C. S. (2007). Phytophthora inundata from native vegetation in Western Australia. Australasian Plant Pathology, 36, 606–608.
Thomidis, T., Tsipouridis, C., & Cullum, J. (2002). Pathogenicity and relative virulence of 11 Greek Phytophthora species on apple and pear rootstocks. New Zeland Journal of Crop and Horticultural Science, 30, 261–264.
Türkölmez, Ş., & Çiftçi, O. (2016). First report of Phytophthora palmivora causing crown and root rot on pear (Pyrus communis) trees in Turkey. Plant Diseases Notes, 100(2), 519.
Tuset, J. J., Hinarejos, C., & Mira, J. L. (2002). Podredumbre de los frutos del peral causada por Phytopththora cactorum en el área mediterránea española. Boletín de Sanidad Vegetal. Plagas, 28, 639–645.
Vettraino, A. M., Morel, O., Perlerou, C., Robin, C., Diamandis, S., & Vannini, A. (2005). Occurrence and distribution of Phytophthora species in European chestnut stands, and their association with ink disease and crown decline. European Journal of Plant Pathology, 111, 169–180.
Vial, A., Latorre, B. A., & Ortúzar, J. (2006). Characterization of Phytophthora citrophthora and P. inundata associated to foot and root rot of citrus trees in Chile. Ciencia e Investigación Agraria, 33(3), 205–216.
White, T. J., Bruns, T., Lee, S., & Taylor, J. (1990). Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In M. A. Innis, D. H. Gelfand, J. J. Sninsky, & T. J. White (Eds.), PCR protocols: A guide to methods and applications (pp. 315–321). San Diego: Academic Press.
Wilcox, W. F., & Mircetich, S. M. (1985). Effects of flooding duration on the development of Phytophthora root and crown rots of cherry. Phytopathology, 75, 1451–1455.
Wormald, H. A. (1919). Phytophthora rot of pears and apples. The Annals of Applied Biology, VI(2&3), 89–100.
Yamak, F., Peever, T. L., Grove, G. G., & Boal, R. J. (2002). Occurrence and identification of Phytophthora spp. pathogenic to pear fruit in irrigation water in the Wenatchee River valley of Washington State. Phytopathology, 92, 1210–1217.
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This project was supported by Secretaría de Ciencia y Técnica de la Universidad Nacional del Comahue, Argentina. We thank Agronomic Engineer Patricio Torres and the producers who made this research study possible.
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Sanchez, A.D., Sosa, M.C., Lutz, M.C. et al. Identification and pathogenicity of Phytophthora species in pear commercial orchards in Argentina. Eur J Plant Pathol 154, 811–822 (2019). https://doi.org/10.1007/s10658-019-01705-2
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DOI: https://doi.org/10.1007/s10658-019-01705-2