Skip to main content
Log in

A General Model for Analyzing Data from Mark-recapture Experiments with an Application to the Pacific Halibut

  • Published:
Environmental and Ecological Statistics Aims and scope Submit manuscript

Abstract

A general model is developed to examine the patterns of the regional movement of tagged and released fish from mark-recapture experiments. It is a stochastic model that incorporates fishing mortality, natural mortality, fish movement, tag-shedding, and different rates of reporting. A likelihood function is constructed for estimating its parameters. We used this model to analyze data on the Pacific halibut from mark-recapture experiments conducted by the International Pacific Halibut Commission (IPHC), with a total of 36,058 releases from 1982 to 1986 and 5,826 recoveries from 1982 to 2000. We estimated their rates of movement among IPHC management areas, along with their instantaneous rates of natural and fishing mortalities. Our analysis revealed that fish movement was not significant among areas, with a resident probability of > 0.92. This lends support to the IPHC catch-at-age stock assessment model (which has no built-in movement components). The estimated instantaneous rate of natural mortality (0.198 year−1) lies between that assumed in all IPHC stock assessments before 1998 (0.20 year−1) and that from 1999 onwards (0.15 year−1). The estimates of the instantaneous rates of fishing mortality were consistent with those from the IPHC stock assessment model.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Best EA (1968). Studies of young halibut: census of juveniles. Western Fish 75(5):38–41, 59–60.

    Google Scholar 

  • C Brownie DR Anderson KP Burnham DS Robson (1985) ArticleTitleStatistical inference from band-recovery data—a handbook, 2nd edn US Fish Wildl Serv Resour Publ 156 305

    Google Scholar 

  • WG Clark (1999) ArticleTitleEffects of an erroneous natural mortality rate on a simple age-structured stock assessment Can J Fish Aquat Sci 56 1721–1731 Occurrence Handle10.1139/cjfas-56-10-1721

    Article  Google Scholar 

  • WG Clark AM Parma (1999) ArticleTitleAssessment of the Pacific halibut stock in 1999 Int’l. Pac. Halibut Comm. Rep Assessment Res Activ 1999 109–137

    Google Scholar 

  • J Heifetz JT Fujioka (1991) ArticleTitleMovement dynamics of tagged sablefish in the northeastern Pacific Fish Res 11 355–374 Occurrence Handle10.1016/0165-7836(91)90009-5

    Article  Google Scholar 

  • R Hilborn (1990) ArticleTitleDetermination of fish movement patterns from tag recoveries using maximum likelihood estimators Can J Fish Aquat Sci 47 635–643 Occurrence Handle10.1139/f90-071

    Article  Google Scholar 

  • Kaimmer SM (2000). Pacific halibut tag release programs and tag release and recovery data. 1925–1998. Int Pac Halibut Comm Tech Rep 41.

  • JG Kalbfleisch (1985) Probability and statistical inference Springer-Verlag New York

    Google Scholar 

  • P McCullagh JA Nelder (1983) Generalized linear models Chapman and Hall London

    Google Scholar 

  • KB Newman (1998) ArticleTitleState-space modeling of animal movement and mortality with application to salmon Biometrics 54 274–297

    Google Scholar 

  • KB Newman (2000) ArticleTitleHierarchic modeling of salmon harvest and migration J Agr. Biol., Environ Stat 5 98–123

    Google Scholar 

  • KB Newman J Rice (2002) ArticleTitleModeling the survival of chinook salmon smolts outmigrating through the lower Sacramento river system J Am Stat Assoc 97 983–993 Occurrence Handle10.1198/016214502388618771

    Article  Google Scholar 

  • JD Nicholas SL Stokes JE Hines MJ Conroy (1982) ArticleTitleAdditional comments on the analysis of homogeneous survival rates in modern bird banding estimation models J Wildl Manag 46 953–962

    Google Scholar 

  • KH Pollock DG Raveling (1982) ArticleTitleAssumptions of modern band-recovery models with emphasis on homogeneous survival rates J Wildl Manag 46 88–98

    Google Scholar 

  • TJ Quinn RB Deriso (1999) Quantitative fish dynamics Oxford University Press Inc. Oxford

    Google Scholar 

  • CJ Schwarz JF Schweigert AN Arnason (1993) ArticleTitleEstimating migration rates using tag recovery data Biometrics 49 177–193

    Google Scholar 

  • JF Schweigert CJ Schwarz (1993) ArticleTitleEstimating migration rates for Pacific Herring (Clupea pallasi) using tag-recovery data Can J Fish Aquat Sci 50 1530–1540 Occurrence Handle10.1139/f93-174

    Article  Google Scholar 

  • Skud BE (1977). Drift, migration, and intermingling of Pacific halibut stocks. Int Pac Halibut Comm Sci Rep 63.

  • PJ Sullivan AM Parma WG Clark (1999) ArticleTitleThe Pacific halibut stock assessment of 1997 Int Pac Halibut Comm Sci Rep 79 1–84

    Google Scholar 

  • Thompson WF, Herrington WC (1930). Life history of the Pacific halibut. (1) Marking experiments. Rep, Int Fish Comm 2.

  • RJ Trumble IR McGregor G St-Pierre DA McCaughran SH Hoag (1990) ArticleTitleSixty years of Tagging Pacific Halibut: A Case Study Am Fish Soc Symp 7 831–840

    Google Scholar 

  • Y Xiao (1996) ArticleTitleA general model for estimating tag-specific shedding rates and tag interactions from exact or pooled times at liberty for a double tagging experiment Can J Fish Aquat Sci 53 1852–1861 Occurrence Handle10.1139/cjfas-53-8-1852

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Ding-Geng Chen.

Additional information

Received: April 2003 / Revised: May 2005

Rights and permissions

Reprints and permissions

About this article

Cite this article

Chen, DG., Xiao, Y. A General Model for Analyzing Data from Mark-recapture Experiments with an Application to the Pacific Halibut. Environ Ecol Stat 13, 149–161 (2006). https://doi.org/10.1007/s10651-005-0002-4

Download citation

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10651-005-0002-4

Keywords

Navigation