Antolin MF, Savage LT, Eisen RJ (2006) Landscape features influence genetic structure of black-tailed prairie dogs (Cynomys ludovicianus). Landsc Ecol 21:867–875
Article
Google Scholar
Asselin H, Fortin MJ, Bergeron Y (2001) Spatial distribution of late-successional coniferous species regeneration following disturbance in southwestern Québec boreal forest. For Ecol Manag 140:9–37
Article
Google Scholar
Bacles CF, Burczyk J, Lowe AJ, Ennos RA (2005) Historical and contemporary mating patterns in remnant populations of the forest tree Fraxinus excelsior L. Evolution 59:979–990
PubMed
Google Scholar
Bacles CF, Lowe AJ, Ennos RA (2006) Effective seed dispersal across a fragmented landscape. Science 311:628. https://doi.org/10.1126/science.1121543
Article
PubMed
Google Scholar
Banks SC, Cary GJ, Smith LA, Davies ID, Driscoll DA, Gill AM, Lindenmayer DB, Peakall R (2013) How does ecological disturbance influence genetic diversity? Trends Ecol Evol 28:670–679
Article
PubMed
Google Scholar
Beaumont MA (1999) Detecting population expansion and decline using microsatellites. Genetics 153:2013–2029
CAS
PubMed
PubMed Central
Google Scholar
Belletti P, Monteleone I, Ferrazzini D (2007) Genetic variability at allozyme markers in sycamore (Acer pseudoplatanus) populations from northwestern Italy. Can J For Res 37:395–403
CAS
Article
Google Scholar
Bergeron Y (1991) The influence of island and mainland lakeshore landscapes on boreal forest fire regimes. Ecology 72:1980–1992
Article
Google Scholar
Bergeron Y (2000) Species and stand dynamics in the mixed woods of Quebec’s southern boreal forest. Ecology 81:1500–1516
Article
Google Scholar
Bergeron Y, Dubuc M (1989) Succession in the southern part of the Canadian boreal forest. Vegetatio 79:51–63
Article
Google Scholar
Bergeron Y, Fenton NJ (2012) Boreal forests of eastern Canada revisited: old growth, nonfire disturbances, forest succession, and biodiversity. Botany 90:509–523
Article
Google Scholar
Bergeron Y, Gauthier S, Flannigan M, Kafka V (2004) Fire regimes at the transition between mixedwood and coniferous boreal forest in northwestern Québec. Ecology 85(7):1916–1932
Article
Google Scholar
Carcaillet C, Bergeron Y, Richard PJH, Fréchette B, Gauthier S, Prairie YT (2001) Change of fire frequency in the eastern Canadian boreal forests during the Holocene: does vegetation composition or climate trigger the fire regime? J Ecol 89:930–946
Article
Google Scholar
Davies ID, Cary GJ, Landguth EL, Lindenmayer DB, Banks SC (2016) Implications of recurrent disturbance for genetic diversity. Ecol Evol 6:1181–1196
Article
PubMed
PubMed Central
Google Scholar
Denneler B, Asselin H, Bergeron Y, Bégin Y (2008) Decreased fire frequency and increased water levels affect riparian forest dynamics in southwestern boreal Quebec, Canada. Can J For Res 38:1083–1094
Article
Google Scholar
Drobyshev I, Flannigan MD, Bergeron Y, Girardin MP, Suran B (2010) Variation in boreal weather explains differences in fire regimes within a Québec south-eastern boreal forest landscape. Int J Wildland Fire 19:1073–1082
Article
Google Scholar
Earl D, Vonholdt B (2012) structure harvester: a website and program for visualizing structure output and implementing the evanno method. Conserv Genet Resour 4:359–361
Article
Google Scholar
Evanno G, Regnaut S, Goudet J (2005) Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol Ecol 14:2611–2620
CAS
Article
PubMed
Google Scholar
Fenton NJ, Bergeron Y (2013) Stochastic processes dominate during boreal bryophyte community assembly. Ecology 94:1993–2006
Article
PubMed
Google Scholar
Foll M, Gaggiotti OE (2006) Identifying the environmental factors that determine the genetic structure of populations. Genetics 174:875–891
CAS
Article
PubMed
PubMed Central
Google Scholar
Gandhi KJK, Spence JR, Langor DW, Morgantini LE (2001) Fire residuals as habitat reserves for epigaeic beetles (Coleoptera: Carabidae. and Staphylinidae). Biol Conserv 102:131–141
Article
Google Scholar
Gasaway WC, DuBois SD (1985) Initial response of moose, Alces alces, to a wildfire in Interior Alaska. Can Field Nat 99:135–140
Google Scholar
Gauthier S, Simon JP, Bergeron Y (1992) Genetic structure and variability in jack pine populations: effects of insularity. Can J For Res 22:1958–1965
Article
Google Scholar
Gauthier S, Vaillancourt MA, Leduc A, De Grandpré L, Kneeshaw D, Morin H, Drapeau P, Bergeron Y (2009) Ecosystem management in the boreal forest. Presses de l’Université du Québec, Quebec
Google Scholar
Girardin MP, Mudelsee M (2008) Past and future changes in Canadian boreal wildfire activity. Ecol Appl 18:391–406. https://doi.org/10.1890/07-0747.1
Article
PubMed
Google Scholar
Goudet J (2001) FSTAT, a program to estimate and test gene diversities and fixation indices (version 2.9.3). http://www2.unil.ch/popgen/softwares/fstat.htm. Updated from Goudet (1995)
Hannon SJ, Schmiegelow FKA (2002) Corridors may not improve the conservation value of small reserves for most Boreal Birds. Ecol Appl 12:1457–1468
Article
Google Scholar
Hoebee S, Menn C, Rotach P, Finkeldey R, Holderegger R (2006) Spatial genetic structure of Sorbus torminalis: the extent of clonal reproduction in natural stands of a rare tree species with a scattered distribution. For Ecol Manag 226:1–8
Article
Google Scholar
Holderegger R, Buehler D, Gugerli F, Manel S (2010) Landscape genetics of plants. Trends Plant Sci 15:675–683
CAS
Article
PubMed
Google Scholar
Keeton WS (2000) Occurrence and reproductive role of remnant old-growth trees in mature Douglas-fir forests, southern Washington, Cascade Range. University of Washington, Seattle
Kremer A, Ronce O, Robledo-Arnuncio JJ, Guillaume F, Bohrer JR, Nathan G, Bridle R, Gomulkiewicz R, Klein EK, Ritland R, Kuparinen A, Gerber S, Schueler S (2012) Long-distance gene flow and adaptation of forest trees to rapid climate change. Ecol Lett 15:378–392
Article
PubMed
PubMed Central
Google Scholar
Lesser MR, Jackson ST (2013) Contributions of long-distance dispersal to population growth in colonising Pinus ponderosa populations. Ecol Lett 16:380–389
Article
PubMed
Google Scholar
Lindenmayer D, Hobbs RJ, Montague-Drake R et al (2008) A checklist for ecological management of landscapes for conservation. Ecol Lett 11: 78–91
PubMed
Google Scholar
Lind-Riehl J, Gailing O (2015) Fine-scale spatial genetic structure of two red oak species, Quercus rubra and Quercus ellipsoidalis. Plant Syst Evol 301:1601–1612
Article
Google Scholar
Luikart G, Cornuet JM (1998) Empirical evaluation of a test for identifying recently bottlenecked populations from allele frequency data. Conserv Biol 12:228–237
Article
Google Scholar
Manel S, Schwartz MK, Luikart G, Taberlet P (2003) Landscape genetics: combining landscape ecology and population genetics. Trends Ecol Evol 18:189–197
Article
Google Scholar
Mosseler A, Major JE, Rajora OP (2003) Old-growth red spruce forests as reservoirs of genetic diversity and reproductive fitness. Theor Appl Genet 106:931–937
CAS
Article
PubMed
Google Scholar
Nathan R, Horvitz N, He Y, Kuparinen A, Schurr FM, Katul GG (2011) Spread of North American wind-dispersed trees in future environments. Ecol Lett 14:211–219
Article
PubMed
Google Scholar
Oddou-Muratorio S, Demesure-Musch B, Pelissier R, Gouyon PH (2004) Impacts of gene flow and logging history on the local genetic structure of a scattered tree species, Sorbus torminalis L. Crantz. Mol Ecol 13:3689–3702
Article
PubMed
Google Scholar
Ouarmim S, Asselin H, Hely C, Bergeron Y, Ali AA (2014) Long-term dynamics of fire refuges in boreal mixedwood forests. J Quat Sci 29:123–129
Article
Google Scholar
Peakall R, Smouse PE (2006) GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol Ecol Notes 6:288–295
Article
Google Scholar
Premoli AC, Kitzberger T (2005) Regeneration mode affects spatial genetic structure of Nothofagus dombeyi forests. Mol Ecol 14:2319–2329
CAS
Article
PubMed
Google Scholar
Premoli AC, Steinke L (2008) Genetics of sprouting: effects of long-term persistence in fire-prone ecosystems. Mol Ecol 17:3827–3835
Article
PubMed
Google Scholar
Pritchard JK, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155:945–959
CAS
PubMed
PubMed Central
Google Scholar
Raftery AE, Lewis SM (1995) The number of iterations, convergence diagnostics and generic Metropolis algorithms. In: Gilks WR, Spiegel-Halter DJ, Richardson S (eds) Practical Markov Chain Monte Carlo. Chapman and Hall, London
Google Scholar
Rosenberg NA (2004) DISTRUCT: a program for the graphical display of population structure. Mol Ecol Notes 4:137–138
Article
Google Scholar
Rousset F (2008) GENEPOP ’ 007: a complete re-implementation of the GENEPOP software for Windows and Linux. Mol Ecol Res 8:103–106
Article
Google Scholar
Savolainen O, Pyhäjärvi T, Knürrr T (2007) Gene flow and local adaptation in trees. Annu Rev Ecol Evol S 38:595–619
Article
Google Scholar
Shohami D, Nathan R (2014) Fire-induced population reduction and landscape opening increases gene flow via pollen dispersal in Pinus halepensis. Mol Ecol 23:70–81
CAS
Article
PubMed
Google Scholar
Storfer A, Murphy MA, Spear SF, Holderegger R, Waits LP (2010) Landscape genetics: where are we now? Mol Ecol 19:3496–3514
Article
PubMed
Google Scholar
Storz JF, Beaumont MA (2002) Testing for genetic evidence of population expansion and contraction: an empirical analysis of microsatellite DNA variation using a hierarchical Bayesian model. Evolution 56:154–166
CAS
Article
PubMed
Google Scholar
Turner MG, Romme WH, Gardner RH, Hargrove WW (1997) Effects of fire size and pattern on early succession in Yellowstone National Park. Ecol Monogr 67:411–433
Article
Google Scholar
Turner MG, Romme WH, Tinker DB (2003) Surprises and lessons from the 1988 Yellowstone fires. Front Ecol Environ 1:351–358
Article
Google Scholar
Uchiyama K, Goto S, Tsuda Y, Takahashi Y, Ide Y (2006) Genetic diversity and genetic structure of adult and buried seed populations of Betula maximowicziana in mixed and post-fire stands. Forest Ecol Manag 237:119–126
Article
Google Scholar
Van Oosterhout C, Hutchinson WF, Wills DPM, Shipley P (2004) MICRO-CHECKER: Software for identifying and correcting genotyping errors in microsatellite data. Mol Ecol Notes 4:535–538
Article
CAS
Google Scholar
Weir BS, Clark Cockerham C (1984) Estimating f-statistics for the analysis of population structure. Evolution 38:1358–1370
CAS
PubMed
Google Scholar
Widmer A, Lexer C (2001) Glacial refugia: sanctuaries for allelic richness, but not for gene diversity. Trends Ecol Evol 16:267–269
CAS
Article
PubMed
Google Scholar
Wilkin KM, Ackerly DD, Stephens SL (2016) Climate change refugia, fire ecology and management. Forests 7:77. https://doi.org/10.3390/f7040077
Article
Google Scholar
Wilson GA, Rannala B (2003) Bayesian inference of recent migration rates using multilocus genotypes. Genetics 163:1177–1191
PubMed
PubMed Central
Google Scholar
Wright SJ, Trakhtenbrot AG, Bohrer G, Detto M, Katul GG, Horvitz N, Muller-Landau HC, Landau FA, Nathan R (2008) Understanding strategies for seed dispersal by wind under contrasting atmospheric conditions. Proc Natl Acad Sci USA 105:19084–19089
CAS
Article
PubMed
PubMed Central
Google Scholar
Xu H, Tremblay F, Bergeron Y (2013) Development and multiplexed amplification of SSR Markers for Thuja occidentalis (Cupressaceae) using shotgun pyrosequencing. Appl Plant Sci 1:1200427
Article
Google Scholar