Abstract
Eleven novel microsatellite markers were isolated from small abalone, Haliotis diversicolor Reeve. These loci were tested on 22 individuals from two different geographic populations. We identified a total of 162 alleles from the 11 microsatellite loci. All of the loci were highly polymorphic. Polymorphism information content (PIC) is ranging from 0.7276 to 0.9163. Observed and expected heterozygosities ranged from 0.2727 to 1.0000 and from 0.7738 to 0.9429, respectively. Three loci deviated significantly from Hardy–Weinberg equilibrium. No pairs of loci displayed linkage disequilibrium. These polymorphic markers will be used to analyze population structure, genetic diversity and construct a genetic linkage map.
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Goudet J (1995) FSTAT, a computer program to test F-statistics. J Hered 86:485–486
Goudet J (2001) FSTAT: a program to estimate and test gene diversities and fixation indices (version 2.9.3). Available from http://www.unil.ch/izea/softwares/fstat.html. Updated from Goudet (1995)
Hamilton MB, Pincus EL, Di Fiore A, Fleischer RC (1999) Universal linker and ligation procedures for construction of genomic DNA libraries enriched for microsatellites. Biotechniques 27(3):500–502 504–507
Jin L, Zhong Y, Chakraborty R (1994) The exact numbers of possible microsatellite motifs. Am J Hum Genet 55:582
Raymond M, Rousset F (2003) GENEPOP (version 3.4): population genetics software for exact tests and ecumenicism. Updated from Raymond and Rousset (1995)
Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning a laboratory manual, 2nd edn. Cold Spring Harbor Laboratory Press, New York
Van Oosterhout C, Hutchinson WF, Wills DPM, Shipley P (2004) MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data. Mol Ecol Notes 4:535–538. doi:10.1111/j.1471-8286.2004.00684.x
Zhongbao L, Changsheng C (2004) Genetic structure of cultured Haliotis diversicolor supertexta (Reeve) populations. J Shellfish Res 23:1135–1137
Acknowledgments
Many thanks to Dr. Geng Jia-ning and Dr. Li Ke-xin for their useful suggestions and assistant Jia Ruo-yu for technical assistance with genotyping analysis. We thank Dr. You Wei-wei and Mr. Wang Bo for care of experimental samples. The project was supported by the National High Technology Research and Development Program of China (2006AA10A407).
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Xin Zhan and Hai-Yan Hu contribute equally to this study.
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Zhan, X., Hu, HY., Ke, CH. et al. Isolation and characterization of eleven microsatellite loci in small abalone, Haliotis diversicolor Reeve. Conserv Genet 10, 1185–1187 (2009). https://doi.org/10.1007/s10592-008-9740-9
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DOI: https://doi.org/10.1007/s10592-008-9740-9