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Microfluidic isolation of aptamers with affinity towards multiple myeloma monoclonal immunoglobulins

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Abstract

Multiple myeloma (MM) is a bone marrow cancer of resident plasma cells that affects 125,000 patients in the U.S. with about 30,000 new cases per year. Its signature is the clonal proliferation of a single plasma cell that secretes a patient specific monoclonal immunoglobulin (M-Ig). Targeting the M-Ig in patient serum could allow sensitive and noninvasive identification of minimal residual disease in multiple myeloma. Aptamers, which are single-stranded oligonucleotides with affinity and specificity to a target molecule, have recently been introduced as affinity reagents for recognition of MM M-Igs. Here we exploit microfluidic SELEX technology to enable rapid and efficient generation of aptamers against M-Ig proteins from MM patients. We first characterize the technology by isolating aptamers with affinity towards the monoclonal antibody rituximab as a model M-Ig and then apply the technology to isolating aptamers specifically targeting M-Igs obtained from serum samples of MM patients. We demonstrate that high-affinity DNA aptamers (KD < 50 nM) for M-Ig proteins from a patient sample could be isolated via microfluidic SELEX within approximately 12 h and using less than 100 micrograms of patient M-Ig. Such aptamers can potentially be used in personalized monitoring of minimal residual disease in MM patients.

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Acknowledgements

This study was supported in part by the National Institutes of Health grants R33CA196470, TL1 TR001875, and UL1TR001873.

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Olsen, T.R., Tapia-Alveal, C., Wen, K. et al. Microfluidic isolation of aptamers with affinity towards multiple myeloma monoclonal immunoglobulins. Biomed Microdevices 25, 3 (2023). https://doi.org/10.1007/s10544-022-00643-x

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