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Population genetic analyses of the endangered alpine Sinadoxa corydalifolia (Adoxaceae) provide insights into future conservation

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Abstract

With increasing temperature and anthropogenic activity, endangered alpine species in the high altitudes of the Qinghai-Tibet Plateau face high risk of extinction; however, they have received little attention in the past. In this study, we used 12 nuclear and nine chloroplast microsatellites (simple sequence repeats, SSR) to assess genetic diversity within and among the only two populations of the highly endangered alpine species Sinadoxa corydalifolia (Adoxaceae). We identified only one individual exhibiting clonal reproduction across all 160 extant plants. The levels of genetic variability were estimated to be very low, with the allele number Na = 3.2 and the expected heterozygosity He = 0.368. The genetic differentiation is extremely high between the two regional populations (FST = 0.214), with a limited rate of gene flow in the recent past. In addition, numerous endemic alleles were found for each subpopulation within each population. Our analyses suggest that it is critical not only to conserve all surviving individuals of the two populations in situ but also to mediate gene flow artificially between subpopulations within each population in this endangered species.

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Acknowledgements

This work was supported by grants from National key research and development program (2017YFC0505203) and the National Natural Science Foundation of China (Grant Numbers 31590821). We thank Dr Quanjun Hu for conducting all estimations.

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Correspondence to Jianquan Liu.

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Communicated by David Hawksworth.

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Appendix

Appendix

See Tables 5, 6 and 7.

Table 5 Detailed location information and sample sizes for the 11 sampled subpopulations
Table 6 The clonal individuals detected by GenAlEx based on nSSR data for all samples
Table 7 Historical gene flow as estimated by MIGRATE between the two populations based on nSSR data

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Wang, Y., Liang, Q., Hao, G. et al. Population genetic analyses of the endangered alpine Sinadoxa corydalifolia (Adoxaceae) provide insights into future conservation. Biodivers Conserv 27, 2275–2291 (2018). https://doi.org/10.1007/s10531-018-1537-7

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  • DOI: https://doi.org/10.1007/s10531-018-1537-7

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