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A novel VHH nanobody against the active site (the CA domain) of tumor-associated, carbonic anhydrase isoform IX and its usefulness for cancer diagnosis

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Abstract

Expression of carbonic anhydrase IX (CAIX) significantly increases under hypoxic conditions in tumor cells. CAIX activity is executed by the catalytic domain (CA) located on the extracellular part of the enzyme. Neutralization of CAIX enzymatic activity reduces malignancy and survival of tumor cells. To inhibit the enzymatic activity, a VHH nanobody was developed against the CA domain of CAIX using phage display technology. Following immunization of a camel with the recombinant CAIX, VHH fragments were isolated by nested PCR on lymphocyte cDNA. Binding affinity of isolated nanobodies was tested by ELISA. A clone (K24) with the highest binding affinity was expressed in a soluble form. Affinity of K24 nanobody was determined to be approx. 2.3 × 10−5. K24 nanobody recognized the expressed CAIX in the HeLa cell lines with high selectivity and specificity. These findings thus have usefulness for the diagnosis and treatment of cancers.

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Acknowledgments

The authors wish to thank Shahed University and Biotechnology Development Council of I. R. Iran for their financial support. We also extend our sincere thanks to Prof. Heather MA Cavanagh of Charles Sturt University, Australia for her kind assistance in English editing and polishing of the final version of this paper.

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Correspondence to Seyed Latif Mousavi Gargari.

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Araste, F., Ebrahimizadeh, W., Rasooli, I. et al. A novel VHH nanobody against the active site (the CA domain) of tumor-associated, carbonic anhydrase isoform IX and its usefulness for cancer diagnosis. Biotechnol Lett 36, 21–28 (2014). https://doi.org/10.1007/s10529-013-1340-1

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