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NYD-SP15: A Novel Gene Potentially Involved in Regulating Testicular Development and Spermatogenesis

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By hybridizing human adult testis cDNA microarrays with human adult and embryo testis cDNA probes, we identified a novel human testis gene, NYD-SP15. NYD-SP15 expression was 3.26-fold higher in adult than in fetal testis; however, there was almost no NYD-SP15 expression in the sperm. NYD-SP15 comprises 3364 base pairs, including a 1545 bp open reading frame encoding a 514 amino acid protein possessing 89% sequence identity with the mouse testis homologous protein. NYD-SP15 is located on human chromosome 13q14.2. The deduced structure of the protein contains two dCMP_cyt_deam domains, indicating a potential functional role for zinc ion binding. The gene is expressed variably in a wide range of tissues, with high expression levels in the testis. Sequence analysis revealed that NYD-SP15 is not a highly conserved protein, with its distribution in high-level species such as vertebrates including Homo, Mus, Rattus, and Canis. The results of semiquantitative polymerase chain reaction in mouse testis representing different developmental stages indicate that NYD-SP15 expression was developmentally regulated. These results suggest the putative NYD-SP15 protein may play an important role in testicular development and spermatogenesis and may be an important factor governing male infertility.

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REFERENCES

  • Anway, M. D., Johnston, D. S., Crawford, D., and Griswold, M. D. (2001). Identification of a novel retrovirus expressed in rat Sertoli cells and granulosa cells. Biol. Reprod. 65:1289–1296.

    Article  PubMed  CAS  Google Scholar 

  • Berg, J. M. (1986). Potential metal-binding domains in nucleic acid binding proteins. Science 232:485–487.

    Article  PubMed  CAS  Google Scholar 

  • Berg, J. M. (1990). Zinc fingers and other metal-binding domains: Elements for interactions between macromolecules. J. Biol. Chem. 265:6513–6516.

    PubMed  CAS  Google Scholar 

  • Diatchenko, L., Lau, Y. F., Campbell, A. P., Chenchik, A., Moqadam, F., Huang, B., Lukyanov, S., Lukyanov, K., Gurskaya, N., Sverdlov, E. D., and Siebert, P. D. (1996). Suppression subtractive hybridization: A method for generating differentially regulated or tissue-specific cDNA probes and libraries. Proc. Natl. Acad. Sci. U.S.A. 93:6025–6030.

    Article  PubMed  CAS  Google Scholar 

  • Diatchenko, L., Lukyanov, S., Lau, Y. F., and Siebert, P. D. (1999). Suppression subtractive hybridization: A versatile method for identifying differentially expressed genes. Methods Enzymol. 303:349–380.

    Article  PubMed  CAS  Google Scholar 

  • Eddy, E. M. (1998). Regulation of gene expression during spermatogenesis. Semin. Cell. Dev. Biol. 9:451–457.

    Article  PubMed  CAS  Google Scholar 

  • Eickhoff, H., Schuchhardt, J., Ivanov, I., Meier-Ewert, S., O′Brien, J., Malik, A., Tandon, N., Wolski, E. W., Rohlfs, E., Nyarsik, L., Reinhardt, R., Nietfeld, W., and Lehrach, H. (2000). Tissue gene expression analysis using arrayed normalized cDNA libraries. Genome. Res. 10:1230–1240.

    Article  PubMed  CAS  Google Scholar 

  • Escalier, D. (2001). Impact of genetic engineering on the understanding of spermatogenesis. Hum. Reprod. Update 7:191–210.

    Article  PubMed  CAS  Google Scholar 

  • Grimmond, S., Van Hateren, N., Siggers, P., Arkell, R., Larder, R., Soares, M. B., de Fatima Bonaldo, M., Smith, L., Tymowska-Lalanne, Z., Wells, C., and Greenfield, A. (2000). Sexually dimorphic expression of protease nexin-1 and vanin-1 in the developing mouse gonad prior to overt differentiation suggests a role in mammalian sexual development. Hum. Mol. Genet. 9:1553–1560.

    Article  PubMed  CAS  Google Scholar 

  • Hansis, C., Jahner, D., Spiess, A. N., Boettcher, K., and Ivell, R. (1998). The gene for the Alzheimer-associated beta-amyloid-binding protein (ERAB) is differentially expressed in the testicular Leydig cells of the azoospermic by w/w (v) mouse. Eur. J. Biochem. 258:53–60.

    Article  PubMed  CAS  Google Scholar 

  • Heinemann, V., Xu, Y. Z., Chubb, S., Sen, A., Hertel, L. W., Grindey, G. B., and Plunkett, W. (1992). Cellular elimination of 2′,2′-difluorodeoxycytidine 5′-triphosphate: A mechanism of self-potentiation. Cancer Res. 52:533–539.

    PubMed  CAS  Google Scholar 

  • Hull, M. G., Glazener, C. M., Kelly, N. J., Conway, D. I., Foster, P. A., Hinton, R. A., Coulson, C., Lambert, P. A., Watt, E. M., and Desai, K. M. (1985). Population study of causes, treatment, and outcome of infertility. Br. Med. J. 29:1693–1697.

    Article  Google Scholar 

  • Isono, K. (1991). Current progress on nucleoside antibiotics. Pharmacol. Ther. 52:269–286.

    Article  PubMed  CAS  Google Scholar 

  • Jamieson, G. P., Finch, L. R., Snook, M., and Wiley, J. S. (1987). Degradation of 1-beta-D-arabinofuranosylcytosine 5′-triphosphate in human leukemic myeloblasts and lymphoblasts. Cancer Res. 47:3130–3135.

    PubMed  CAS  Google Scholar 

  • Lawler, A. M., and Gearhart, J. D. (1998). Genetic counseling for patients who will be undergoing treatment with assisted reproductive technology. Fertil. Steril. 70:412–413.

    Article  PubMed  CAS  Google Scholar 

  • Lewis, R. (1999). Human Genetics Concepts and Applications, 3rd ed., McGraw-Hill, Boston.

    Google Scholar 

  • Liang, P., and Pardee, A. (1992). Differential display of eukaryotic messenger RNA by means of the polymerase chain reaction. Science 257: 967–971.

    Article  PubMed  CAS  Google Scholar 

  • Martin-du Pan, R. C., and Campana, A. (1993). Physiopathology of spermatogenic arrest. Fertil. Steril. 60:937–946.

    PubMed  CAS  Google Scholar 

  • Moore, J. T., Silversmith, R. E., Maley, G. F., and Maley, F. (1993). T4-phage deoxycytidylate deaminase is a metalloprotein containing two zinc atoms per subunit. J. Biol. Chem. 4:2288–2291.

    Google Scholar 

  • Okabe, M., Ikawa, M., and Ashkenas, J. (1998). Male infertility and the genetics of spermatogenesis. Am. J. Hum. Genet. 62:1274–1281.

    Article  PubMed  CAS  Google Scholar 

  • Reichard, P. (1988). Interactions between deoxyribonucleotide and DNA synthesis. Annu. Rev. Biochem. 57:349–374.

    Article  PubMed  CAS  Google Scholar 

  • Rockett, J. C., Christopher Luft, J., Brian Garges, J., Krawetz, S. A., Hughes, M. R., Hee Kirn, K., Oudes, A. J., and Dix, D. J. (2001). Development of a 950-gene DNA array for examining gene expression patterns in mouse testis. Genome. Biol. 2:Research 0014.1–0014.9.

  • Schroder, J. K., Seidelmann, M., Kirch, H. C., Seeber, S., and Schutte, J. (1998). Assessment of resistance induction to cytosine arabinoside following transfer and overexpression of the deoxycytidylate deaminase gene in vitro. Leuk. Res. 22:619–624.

    Article  PubMed  CAS  Google Scholar 

  • Sha, J., Zhou, Z., Li, J., Yin, L., Yang, H., Hu, G., Luo, M., Chan, H. C., and Zhou, K. (2002). Identification of testis development and spermatogenesis-related genes in human and mouse testes using cDNA arrays. Mol. Hum. Reprod. 8:511–517.

    Article  PubMed  CAS  Google Scholar 

  • Takahashi, K., and Nei, M. (2000). Efficiencies of fast algorithms of phylogenetic inference under the criteria of maximum parsimony, minimum evolution, and maximum likelihood when a large number of sequences are used. Mol. Biol. Evol. 17:1251–1258.

    PubMed  CAS  Google Scholar 

  • Vallee, B. L., and Auld, D. S. (1990). Zinc coordination, function, and structure of zinc enzymes and other proteins. Biochemistry 29:5647–5659.

    Article  PubMed  CAS  Google Scholar 

  • Vallee, B. L., Coleman, J. E., and Auld, D. S. (1991). Zinc fingers, zinc clusters, and zinc twists in DNA-binding protein domains. Proc. Natl. Acad. Sci. U.S.A. 88:999–1003.

    Article  PubMed  CAS  Google Scholar 

  • Von Arnim, A. G., and Deng, X. (1993). Ring finger motif of Arabidopsis thaliana COP1 defines a new class of zinc-binding domain. J. Biol. Chem. 268:19626–19631.

    PubMed  CAS  Google Scholar 

  • Willson, K., and Ashworh, A. (1987). Mammalian spermatogenic gene expression. Trends Genet. 3:351–355.

    Article  Google Scholar 

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Correspondence to Jianmin Li.

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Liu, Q., Liu, J., Cao, Q. et al. NYD-SP15: A Novel Gene Potentially Involved in Regulating Testicular Development and Spermatogenesis. Biochem Genet 44, 405–419 (2006). https://doi.org/10.1007/s10528-006-9038-x

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  • DOI: https://doi.org/10.1007/s10528-006-9038-x

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