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Streptomyces ferrugineus sp. nov., isolated from mangrove soil in Thailand

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Abstract

Bacterial strain HV38T was isolated from mangrove soil, which was collected from Thailand. Chemotaxonomic and morphological characteristics were found to be typical of members of the genus Streptomyces. The strain was found to form a distinct phyletic line in the Streptomyces 16S rRNA gene tree and to be closely associated with the type strains of Streptomyces coeruleofuscus CGMCC 4.1667T (98.84 % sequence similarity), Streptomyces chromofuscus CGMCC 4.1451T (98.63 %) and Streptomyces albidoflavus CGMCC 4.1291T (98.56 %). The major menaquinones were identified as MK-9(H8) and MK-9(H10). Its major cellular fatty acids were found to be iso-C14:0, iso-C15:0, anteiso-C15:0, iso-C16:1ω8c, C16:0, anteiso-C16:1ω8c, iso-C16:0 and anteiso-C16:0. The DNA–DNA hybridization values between strain HV38T with S. coeruleofuscus CGMCC 4.1667T, S. chromofuscus CGMCC 4.1451T and S. albidoflavus CGMCC 4.1291T were 32.7 ± 0.9, 21.8 ± 0.3 and 19.9 ± 0.9 %, respectively, which clearly supported the conclusion that they belong to separate genomic species. Cumulatively, the data indicated that strain HV38T represents a novel species of the genus Streptomyces, for which the name Streptomyces ferrugineus sp. nov. is proposed. The type strain is HV38T (=CCTCC AA2014009T = DSM 42152T).

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Acknowledgments

Kui Hong, Wasu Pathom-aree, Kannika Duangmal and Rattanaporn Srivibool are grateful for the financial support from the NSFC (31111140297)-NRCT Grant for the Thai–Chinese Cooperative Project, “Actinomycetes from coastal marine and mangrove sediments of Eastern Thailand and their ability to produce bioactive compounds” and for the Chinese MOST-TICA Sino–Thai Joint Research and Development Project, “Selective isolation and prepharmaceutical research on novel and rare actinomycetes from tropical marine and terrestrial habitats” (19-505J).

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Authors and Affiliations

  1. Shaanxi Engineering Research Center of Edible and Medicated Fungi, School of Bioscience and Engineering, Shaanxi University of Technology, Hanzhong, 723000, People’s Republic of China

    Chang-ying Ruan & Xiu-chao Xie

  2. Key Laboratory of Combinatorial Biosynthesis and Drug Discovery (Wuhan University), Ministry of Education, Wuhan University School of Pharmaceutical Sciences, Wuhan, 430071, People’s Republic of China

    Chang-ying Ruan, Li Zhang, Wan-wan Ye, Zi-xin Deng & Kui Hong

  3. Institute of Marine Science, Burapha University, Chonburi, 20131, Thailand

    Rattanaporn Srivibool

  4. Department of Microbiology, Faculty of Science, Kasetsart University, Bangkok, 10900, Thailand

    Kannika Duangmal

  5. Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand

    Wasu Pathom-aree

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  1. Chang-ying Ruan
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  2. Li Zhang
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  3. Wan-wan Ye
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  4. Xiu-chao Xie
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  7. Wasu Pathom-aree
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  8. Zi-xin Deng
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  9. Kui Hong
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Corresponding authors

Correspondence to Xiu-chao Xie, Wasu Pathom-aree or Kui Hong.

Additional information

The GenBank/EMBL/DDBJ accession numbers for the 16S rRNA gene sequence of strain HV38T is KF767859.

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Ruan, Cy., Zhang, L., Ye, Ww. et al. Streptomyces ferrugineus sp. nov., isolated from mangrove soil in Thailand. Antonie van Leeuwenhoek 107, 39–45 (2015). https://doi.org/10.1007/s10482-014-0301-6

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  • DOI: https://doi.org/10.1007/s10482-014-0301-6

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