First report of the complete genomic sequences of strawberry mild yellow edge virus and strawberry vein banding virus isolated in Japan

Abstract

Strawberry vein banding virus (SVBV) and strawberry mild yellow edge virus (SMYEV) have caused disease in strawberries for many years in Japan, but little is known about their molecular properties. We thus determined the complete genomic sequence of an isolate of each virus from Tochigi Prefecture. A nucleotide sequence analysis showed that SVBV is closely related to Chinese isolates, whereas SMYEV is closely related to German and Argentine isolates. This is the first report describing the complete genome sequences of SVBV and SMYEV isolated in Japan. Moreover, we constructed an infectious SMYEV clone, which induced mild yellowing on inoculated strawberry plants.

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Acknowledgements

Strawberry plants were provided and maintained by the Plant Pathology and Applied Entomology Laboratory of the Tochigi Prefectural Agricultural Experiment Station. This study was supported by a grant (27017A) to TN from the “Science and Technology Research Promotion Program for Agriculture, Forestry, Fisheries and Food Industry”. We thank Edanz Group (https://en-author-services.edanzgroup.com/) for editing a draft of this manuscript.

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Correspondence to Yutaro Neriya.

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The DDBJ/EMBL/GenBank accession numbers for the SVBV-T, SMYEV-T1, and SMYEV-T2 sequences are LC315804, LC515235, and LC515236, respectively

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a

Neighbor-joining phylogenetic trees for SVBV-T, other SVBV isolates, and CaMV (outgroup; accession NC_001497) based on the amino acid sequence encoded by ORF5 and for b, c SMYEV-T1, SMYEV-T2, and other SMYEV isolates based on the amino acid sequences encoded byb ORF1 and c ORF5. Numbers on branches are the bootstrap values (%) obtained for 1000 replicates. Only bootstrap values exceeding 60% are presented (PPTX 181 kb)

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Takamura, Y., Yamaryo, S., Wang, W. et al. First report of the complete genomic sequences of strawberry mild yellow edge virus and strawberry vein banding virus isolated in Japan. J Gen Plant Pathol (2020). https://doi.org/10.1007/s10327-020-00947-x

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Keywords

  • Strawberry
  • Caulimovirus
  • SVBV
  • Potexvirus
  • SMYEV