Skip to main content
Log in

First report of leaf sheath rot of Welsh onion caused by nine taxa of Rhizoctonia spp. and characteristics of the pathogens

  • Fungal Diseases
  • Published:
Journal of General Plant Pathology Aims and scope Submit manuscript

Abstract

From 2007 to 2013, a disease of Welsh onion, causing leaf sheath rot and concomitant death of outer leaves was found in 20 fields in Hokkaido, Japan. We obtained 20 Rhizoctonia isolates from diseased tissues and identified them based on the number of nuclei, hyphal fusion reactions, and molecular techniques using specific PCR primers and sequence of the rDNA-ITS region. The 20 isolates consisted of 16 multinucleate and four binucleate isolates. Of the multinucleate isolates, five were found to be so far unknown and designated here as Rhizoctonia solani AG-4 hybrid subgroup between HG-I and HG-II. Others were identified as AG-1 IB (three isolates), AG-2-2 IIIB (two isolates), AG-4 HG-I (two isolates), AG-1 IC (one isolate), AG-2-1 (one isolate), AG-4 HG-II (one isolate) and AG-5 (one isolate). All four binucleate isolates were binucleate Rhizoctonia AG-U. Original symptoms were reproduced on all plants inoculated with these isolates. Thus, we revealed that as many as nine taxa of Rhizoctonia spp. were associated with the disease. This is the first report of leaf sheath rot of Welsh onion caused by Rhizoctonia spp.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2

Similar content being viewed by others

References

  • Anderson JB, Stretton HM, Groth JV, Flentje NT (1972) Genetics of heterokaryosis in Thanatephorus cucumeris. Phytopathology 62:1057–1065

    Article  Google Scholar 

  • Arakawa M, Inagaki K (2014) Molecular markers for genotyping anastomosis groups and understanding the population biology of Rhizoctonia species. J Gen Plant Pathol 80:401–407

    Article  CAS  Google Scholar 

  • Baker KF (1970) Types of Rhizoctonia diseases and their occurrence. In: Parmeter JR (ed) Rhizoctonia solani: biology and pathology. University of California Press, Berkeley, pp 125–148

    Google Scholar 

  • Carling DE (1996) Grouping in Rhizoctonia solani by hyphal anastomosis reaction. In: Sneh B, Jabaji-Hare S, Neate S, Dijst G (eds) Rhizoctonia species taxonomy, molecular biology, ecology, pathology and disease control. Kluwer, Dordrecht, pp 37–47

    Chapter  Google Scholar 

  • Carling DE, Kuninaga S, Brainard KA (2002) Hyphal anastomosis reactions, rDNA-internal transcribed spacer sequences, and virulence levels among subsets of Rhizoctonia solani anastomosis group-2 (AG-2) and AG-BI. Phytopathology 92:43–50

    Article  CAS  PubMed  Google Scholar 

  • Cubeta MA, Briones-Ortega R, Vilgalys R (1993) Reassessment of heterokaryon formation in Rhizoctonia solani anastomosis group 4. Mycologia 85:777–787

    Article  Google Scholar 

  • Ford-Lloyd BV, Armstrong SJ (1993) Welsh onion Allium fistulosum L. In: Kalloo G, Bergh BO (eds) Genetic improvement of vegetable crops. Pergamon Press, Oxford, pp 51–58

    Chapter  Google Scholar 

  • Homma Y, Ishii M (1984) Anastomosis groups of Rhizoctonia solani Kühn responsible for various symptoms of root rot of Japanese radish (in Japanese with English summary). Bull Shikoku Agric Exp Stn 42:1–9

    Google Scholar 

  • Hyakumachi M, Sumino A (1984) New morphological type (IC) in Rhizoctonia solani AG-1 isolated from the sugarbeet-manufactory-waste-soils and some of its characteristics (in Japanese with English summary). Jpn J Phytopathol 50:507–514

    Article  Google Scholar 

  • Hyakumachi M, Priyatmojo A, Kubota M, Fukui H (2005) New anastomosis groups, AG-T and AG-U, of binucleate Rhizoctonia spp. causing root and stem rot of cut-flower and miniature roses. Phytopathology 95:784–792

    Article  PubMed  Google Scholar 

  • Kubota M, Abiko K (1997) Rhizoctonia solani Kühn isolated from damping-off broccoli (in Japanese). Proc Kansai Pl Prot 39:33–34

    Google Scholar 

  • Kubota M, Tomioka K, Sato T (2009) Damping-off of broccoli caused by Rhizoctonia solani AG-1 IC (in Japanese). Annu Rep Kansai Pl Prot 51:27–28

    Article  Google Scholar 

  • Kumazawa S, Katsumata K (1965) Welsh onion. In: Kumazawa S (ed) The theory of vegetable and horticulture (in Japanese). Yokendo, Tokyo, pp 280–289

    Google Scholar 

  • Kuninaga S (2003) Current situation of the taxonomy of Rhizoctonia solani (in Japanese). Plant Prot 57:219–222

    Google Scholar 

  • Kuninaga S, Godoy-Lutz G, Yokosawa R (2004) ITS heterogeneity within an individual isolate of Rhizoctonia solani AG-1 (Abstract in Japanese). Jpn J Phytopathol 70:219

    Google Scholar 

  • Misawa T, Kuninaga S (2010) The first report of tomato foot rot caused by Rhizoctonia solani AG-3 PT and AG-2-Nt and its host range and molecular characterization. J Gen Plant Pathol 76:310–319

    Article  Google Scholar 

  • Misawa T, Kuninaga S (2013) First report of white leaf rot on Chinese chives caused by Rhizoctonia solani AG-2-1. J Gen Plant Pathol 79:280–283

    Article  CAS  Google Scholar 

  • Misawa T, Toda T (2013) First report of black scurf on carrot caused by binucleate Rhizoctonia AG-U. J Gen Plant Pathol 79:86–88

    Article  Google Scholar 

  • Misawa T, Yamazaki K, Takada K (2013) Damping-off of broccoli caused by Rhizoctonia solani AG-2-1 (in Japanese with English summary). Annu Rep Plant Prot North Jpn 64:60–64

    Google Scholar 

  • Misawa T, Kubota M, Sasaki J, Kuninaga S (2015) First report of broccoli foot rot caused by Rhizoctonia solani AG-2-2 IV and pathogenicity comparison of the pathogen with related pathogens. J Gen Plant Pathol 81:15–23

    Article  Google Scholar 

  • Naito S, Sugimoto T, Yamaguchi T, Fujisawa I (1975) Anastomosis groups of Rhizoctonia solani Kühn isolated from diseased sugar beet seedlings (in Japanese with English summary). Res Bull Hokkaido Natl Agric Exp Stn 111:25–35

    Google Scholar 

  • Naito S, Yamaguchi T, Sugimoto T, Homma Y (1993) A simple method for the long-time culture storage of Rhizoctonia spp. on barley grains (in Japanese with English summary). Ann Rept Plant Prot North Jpn 44:20–23

    Google Scholar 

  • Ogoshi A (1976) Studies on the grouping of Rhizoctonia solani Kühn with hyphal anastomosis and on the perfect stages of groups (in Japanese with English summary). Bull Nat Inst Agric Sci Ser C 30:1–63

    Google Scholar 

  • Ogoshi A (1987) Ecology and pathogenicity of anastomosis and intraspecific groups of Rhizoctonia solani Kühn. Ann Rev Phytopathol 25:125–143

    Article  Google Scholar 

  • Phillips AJL (1993) The use of protoplasts for the preparation of homokaryons from heterokaryotic isolates of Rhizoctonia solani. Mycol Res 97:456–460

    Article  Google Scholar 

  • Priyatmojo A, Yotani Y, Hattori K, Kageyama K, Hyakumachi M (2001) Characterization of Rhizoctonia spp. causing root and stem rot of miniature rose. Plant Dis 85:1200–1205

    Article  CAS  Google Scholar 

  • Rinehart TA, Copes WE, Toda T, Cubeta MA (2007) Genetic characterization of binucleate Rhizoctonia species causing web blight on azalea in Mississippi and Alabama. Plant Dis 91:616–623

    Article  CAS  Google Scholar 

  • Sharon M, Kuninaga S, Hyakumachi M, Naito S, Sneh B (2008) Classification of Rhizoctonia spp. using rDNA-ITS sequence analysis supports the genetic basis of the classical anastomosis grouping. Mycoscience 49:93–114

    Article  CAS  Google Scholar 

  • Sneh B, Burpee L, Ogoshi A (1991) Identification of Rhizoctonia species. APS Press, St. Paul, pp 17–18

    Google Scholar 

  • Stevens Johnk J, Jones RK (2001) Differentiation of three homogeneous groups of Rhizoctonia solani anastomosis group 4 by analysis of fatty acids. Phytopathology 91:821–830

    Article  Google Scholar 

  • Watanabe B, Matsuda A (1966) Studies on grouping Rhizoctonia solani Kühn pathogenic to upland crops (in Japanese with English summary). Bull Appointed Exp 7:1–131

    Google Scholar 

  • White TJ, Bruns T, Lee S, Taylor JW (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols: a guide to methods and applications. Academic Press, San Diego, pp 315–322

    Google Scholar 

  • Yamamoto T, Uehara H (1972) Damping-off of Welsh onion and onion and their control (in Japanese). Plant Prot 4:153–156

    Google Scholar 

  • Yamauchi N, Miura Y, Shirakawa T (2009) Damping-off of broccoli caused by Rhizoctonia solani AG-4 HG-I (in Japanese with English summary). Annu Rep Plant Prot North Jpn 60:105–107

    Google Scholar 

  • Yang YG, Zhao C, Guo ZJ, Wu XH (2015) Characterization of a new anastomosis group (AG-W) of binucleate Rhizoctonia, causal agent for potato stem canker. Plant Dis 99:1757–1763

    Article  Google Scholar 

Download references

Acknowledgements

This study was supported in part by Grants-in-Aid for Regional R&D Proposal-Based Program from Northern Advancement Center for Science & Technology of Hokkaido Japan. For help with this work, we thank staff members of Hokkaido Prefectural Oshima, Sorachi and Iburi Agricultural Extension Centers, Japan. We thank A. Sumino (Hokkaido Research Organization) for valuable comments and Dr. N. Matsumoto (Hokkaido University, Japan) for critically reading the manuscript and correcting the English.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Tomoo Misawa.

Additional information

The nucleotide sequence data reported are available in the DDBJ/EMBL/GenBank databases as accessions LC090068–090073.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Misawa, T., Kurose, D. & Kuninaga, S. First report of leaf sheath rot of Welsh onion caused by nine taxa of Rhizoctonia spp. and characteristics of the pathogens. J Gen Plant Pathol 83, 121–130 (2017). https://doi.org/10.1007/s10327-017-0706-y

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10327-017-0706-y

Keywords

Navigation