Abstract
Mitochondrial DNA typing of 52 fish eggs collected in Sendai Bay and off Johban revealed ten haplotypes of the 225–251 bp region of 16S ribosomal DNA. Comparing with known sequences of fishes, we identified them as Trachurus japonicus (Carangidae), Pagrus major, Evynnis japonica (Sparidae), Paralichthys olivaceus, Pseudorhombus sp. (Paralichthidae), Pennahia argentata (Sciaenidae) and Platycephalus sp. (Platycephalidae). The occurrence of Trachurus japonicus and sparid eggs in the study area indicates significant extensions to the ranges of their spawning sites northward. Our method is useful for identifying fish eggs that are difficult to diagnose by morphology, and to uncover cryptic fish egg assemblages in the field.
Similar content being viewed by others
References
Akimoto S, Sezaki K, Mitani I, Watabe S (2005) Distribution around the Izu Islands of eggs and larvae of the alfonsino Beryx splendens identified by mitochondrial 16S rRNA gene analysis. Nippon Suisan Gakkaishi 71:205–211
Aoyama J, Ishikawa S, Otake T, Mochioka N, Suzuki Y, Watanabe S, Shinoda A, Inoue J, Lokman PM, Inagaki T, Oya M, Hasumoto H, Kubokawa K, Lee TW, Fricke H, Tsukamoto K (2001) Molecular approach to species identification of eggs with respect to determination of the spawning site of the Japanese eel Anguilla japonica. Fish Sci 67:761–763
Chiou LM, Chung MC, Tung PG, Hsu T, Yang JS (2004) The use of egg chorion glycoprotein of Epinephelus malabaricus for egg identification. J Fish Biol 65:1614–1621
Detwiler MM, Hamp TJ, Kazim AL (2004) DNA sequencing using the liquid polymer POP-7TM on an ABI PRISMR3100 genetic analyzer. Biotechniques 36:932–933
Estoup E, Lagiader CR, Perrot E, Chourrout D (1996) Rapid one-tube extraction for reliable PCR detection of fish polymorphic markers and transgenes. Mol Mar Biol Biotechnol 5:295–298
Fujita S (1956) On the development of the egg and prelarval stages of Nibea argentata (Houttuyn). Sci Bull Fac Agr Kyushu Univ 15:537–540
Fukuhara O (1970) Morphological observation on the egg development and larval stage of the red sea-bream, Chrysophrys major Temminck & Schlegel. Aquiculture (Suisanzoshoku) 17:71–76
Hajibabaei M, Smith MA, Janzen DH, Rodriguez JJ, Whitfield JB, Hebert PDN (2006) A minimalist barcode can identify a specimen whose DNA is degraded. Mol Ecol Notes 6:959–964
Hiroishi S, Yuki Y, Yuruzume E, Onishi Y, Ikeda T, Komaki H, Okiyama M (2004) Identification of formalin-preserved eggs of red sea bream (Pagrus major) (Pisces: Sparidae) using monoclonal antibodies. Fish Bull 102:555–560
Hyde JR, Lynn E, Humphreys R Jr, Musyl M, West AP, Vetter R (2005) Shipboard identification of fish eggs and larvae by multiplex PCR, and description of fertilized eggs of blue marlin, shortbill spearfish, and wahoo. Mar Ecol Prog Ser 286:269–277
Ikeda T, Mito S (1988) Identification of eggs and hatched larvae. In: Okiyama M (ed) An atlas of the early stage fishes in Japan. Tokai Univ Press, Tokyo, pp 999–1119
Ikeda T, Chuma S, Okiyama M (1991) Identification of pelagic eggs of marine fishes by rearing method. Jpn J Ichthyol 38:199–206
Kochzius M, Nolte M, Weber H, Silkenbeumer N, Hjorleifsdottir S, Hreggvidsson GO, Marteinsson V, Kappel K, Planes S, Tinti F, Magoulas A, Vazquez EG, Turan C, Hervet C, Falgueras DC, Antoniou A, Landi M, Blohm D (2008) DNA microarrays for identifying fishes. Mar Biotechnol 10:207–217
Ochiai A, Tanaka M (1986) Ichthyology, vol 2. Koseisha-koseikaku, Tokyo
Ochiai A, Mutsutani K, Umeda S (1982) Development of eggs, larvae and juveniles of jack mackerel, Trachurus japonicus. Jpn J Ichthyol 29:86–92
Paine MA, Jan R, McDowell JR, Graves JE (2008) Specific identification using COI sequence analysis of scombrid larvae collected off the Kona coast of Hawaii Island. Ichthyol Res 55:7–16
Perez J, Alvarez P, Martinez JL, Garcia-Vazquez E (2005) Genetic identification of hake and megrim eggs in formaldehyde-fixed plankton samples. ICES J Mar Sci 62:908–914
Rosel PE, Kocher TD (2002) DNA-based identification of larval cod in stomach contents of predatory fishes. J Exp Mar Biol Ecol 267:75–88
Saitoh K, Takagaki M, Yamashita Y (2003) Detection of Japanese flounder-specific DNAs from gut contents of potential predators in the field. Fish Sci 69:473–477
Sezaki K, Kuboshima Y, Mitani I, Fukui A, Watabe S (2001) Identification of chub and spotted mackerels with mitochondrial cytochrome b gene and its application to respective pelagic eggs fixed with formalin. Nippon Suisan Gakkaishi 67:17–22
Suda Y, Shimizu M, Nose Y (1987) Confirmation of spawning groups of Japanese jack mackerel Trachurus japonicus in the low stock level period. Bull Japan Soc Sci Fish 53:1789–1796
Yasunaga Y (1988) Studies on physiology and ecology of larvae and juveniles of plaice Paralichthys olivaceus. Bull Nat Res Inst Fish Eng 9:9–164
Yoda M, Sassa C (2004) Spawning grounds of jack mackerel. In: Hara I, Tokai T (eds) Spawning ground and recruitment process of jack mackerel: from the East China Sea to the coastal waters of Japan. Koseisha-koseikaku, Tokyo, pp 19–30
Wuyts J, De Rijk P, Van de Peer Y, Winkelmans T, De Wachter R (2001) The European large subunit ribosomal RNA database. Nucleic Acids Res 29:175–177
Acknowledgments
Nobuhiko Taniguchi and Masamichi Nakajima provided one of us (TT) with the opportunity to perform this collaborative work. We are grateful to crew of the research vessel Wakatakamaru, Sayuri Dasai, Ryo Nakano, Masakane Ohshima, Mitsuhiro Shoji and Michio Yoneda, for their help in the field survey. Special thanks go out to Fumie Abe and Shizuka Sasaki for their assistance in laboratory procedures. Masato Aritaki and Yuichiro Fujinami provided us with flatfish eggs to use as reference samples. This paper is a scientific contribution from the Fisheries Research Agency, Japan (FRA-TNFRI-B108).
Author information
Authors and Affiliations
Corresponding author
About this article
Cite this article
Saitoh, K., Uehara, S. & Tega, T. Genetic identification of fish eggs collected in Sendai Bay and off Johban, Japan. Ichthyol Res 56, 200–203 (2009). https://doi.org/10.1007/s10228-008-0073-y
Received:
Revised:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s10228-008-0073-y