Abstract
We developed four microsatellite DNA loci to test for multiple paternity of black rockfish, Sebastes inermis, from the Seto Inland Sea of Japan. All loci showed a high degree of polymorphism (number of alleles per locus = 10–14, expected heterozygosity = 0.80) and discriminating power (probability of identity index = 3.71 × 10−6, exclusion probability = 0.999) in unrelated wild specimens (n = 32). Genotypic assignment of five dams (109–220 mm in total length) and 50 embryos from each dam (n = 50) indicated that four dams were mated with a single sire. Only for one dam and three of her embryos we could not exclude multiple paternity.
References
Colbourne JK, Neff BN, Wright JM, Gross MR (1996) DNA fingerprinting of bluegill sunfish (Lepomis macrochirus) using (GT) n microsatellites and its potential for assessment of mating success. Can J Fish Aquat Sci 53:342–349
Evans JP, Magurran AE (2000) Multiple benefits of multiple mating in guppies. Proc Natl Acad Sci USA 97:10074–10076
Fujita H, Kohda M (1996) Male mating effort in the viviparous scorpionfish, Sebasticus marmoratus. Ichthyol Res 43:247–255
Gomez-Uchida D, Hoffman EA, Ardren WR, Banks MA (2003) Microsatellite markers for the heavily exploited canary (Sebastes pinniger) and other rockfish species. Mol Ecol Notes 3:387–389
Harada E (1962) A contribution to the biology of the black rockfish S. inermis. Publ Seto Mar Biol Lab 5:307–361
Hatanaka M, Iizuka K (1962) Studies of the fish community in the Zostera area. III. Efficiency and production of Sebastes inermis. Bull Jpn Soc Sci Fish 28:305–313
Jennions MD, Petrie M (2000) Why do females mate multiply? A review of the genetic benefits. Biol Rev 75:21–64
Jones AG, Avise JC (1997) Polygynandry in the dusky pipefish syngnathus floridae revealed by microsatellite DNA markers. Evolution 51:1611–1622
Kai Y, Nakabo T (2002) Morphological differences among three color morphotypes of Sebastes inermis (Scorpaenidae). Ichthyol Res 49:260–266
Kai Y, Nakayama K, Nakabo T (2002) Genetic differences among three colour morphotypes of the black rockfish, Sebastes inermis, inferred from mtDNA and AFLP analyses. Mol Ecol 11:2591–2598
Love MS, Yoklavich M, Thorsteinson L (2002) The Rockfishes of the Northeast Pacific. University of California Press, Berkeley and Los Angele, CA
Masuda H, Amaoka K, Araga C, Uyeno T, Shino T (1984) The fishes of the Japanese Archipelago. vol. 1. Tokai University Press, Tokyo, Japan
Mio S (1960) Biology of Sebastes inermis Cuvier et Valenciennes. Rec Oceanogr Works Jpn 5:86–97
Mizue K (1959) About the seasonal cycle of mature testis of Sebastes inermis. Bull Fac Fish Nagasaki Univ 8:111–122
Munehara H, Takenaka O (2000) Microsatellite markers and multiple paternity in a parental care fish, Hexagrammos otakii. J Ethol 18:101–104
Murakami T, Aida S, Yoshioka K, Yoshida H, Blanco Gonzalez E, Nishibori M, Umino T (2006) Mitochondrial DNA and microsatellite DNA as genetic tags for stocked population of black rockfish Sebastes inermis of hatchery origin. Nippon Suisan Gakkaishi 72:710–716
Neff BD, Pitcher TE (2005) Genetic quality and sexual selection: an integrated framework for good genes and compatible genes. Mol Ecol 14:19–38
Newcomer SD, Zeh JA, Zeh DW (1999) Genetic benefits enhance the reproductive success of polyandrous females. Proc Natl Acad Sci 96:10236–10241
Ng WC, Sadovy Y, Leung FCC (2003) Mating system of the rockfish, Sebastiscus marmoratus as revealed by DNA fingerprinting. Ichthyol Res 50:339–348
Perez-Enriquez R, Takagi M, Taniguchi N (1999) Genetic variability and pedigree tracing of a hatchery-reared stock of red sea bream (Pagrus major) used for stock enhancement, based on microsatellite DNA markers. Aquaculture 173:413–423
Plaza G, Katayama S, Omori M (2004) Spatio-temporal patterns of parturition of the black rockfish Sebastes inermis in Sendai Bay, northern Japan. Fish Sci 70:256–263
Schneider S, Roessli D, Excoffier L (2000) Arlequin ver. 2.0: a software for population genetic data analysis. Genetics and Biometry Laboratory, University of Geneva, Switzerland
Sekino M, Takagi N, Hara M, Takahashi H (2001) Analysis of microsatellite DNA polymorphisms in rockfish Sebastes thompsoni and application to population genetics studies. Mol Biotechnol 3:45–52
Shinomiya A, Ezaki O (1991) Mating habits of the rockfish Sebastes inermis. Environ Biol Fish 30:15–22
Sogard S, Gilbert-Horvath E, Anderson E, Fisher R, Berkeley S, Garza J (2008) Multiple paternity in viviparous kelp rockfish, Sebastes atrovirens. Environ Biol Fish 81:7–13
Takahashi D, Ohara K (2006) Parentage analyses of freshwater goby Rhinogobius sp. OR using microsatellite DNA markers and egg developmental stages of eggs in the nest. Ichthyol Res 53:87–92
Yoshida K, Nakagawa M, Wada S (2001) Pedigree tracing of a hatchery-reared stock used for aquaculture and stock enhancement based on DNA markers. Fish Genetics and Breeding Sci 30:27–35
Yoshida K, Nakagawa M, Wada S (2005) Multiplex PCR system applied for analyzing microsatellite loci of Schlegel’s black rockfish Sebastes schlegeli. Mol Ecol Notes 5:416–418
Villanueva B, Verspoor E, Visscher PM (2002) Parental assignment in fish using microsatellite genetic markers with finite number of parents and offspring. Anim Gen 33:33–41
Zane L, Nelson WS, Jones AG, Avis JC (1999) Microsatellite assessment of multiple paternity in natural populations of a live bearing fish, Gambusia holbrooki. J Evol 12:61–69
Acknowledgments
We express special thanks to Mr. George Kandathil for constructive comments that have improved the manuscript. The present study was partly supported by a grant from the Japan Ministry of Education, Culture, Sports, Science and Technology.
Author information
Authors and Affiliations
Corresponding author
About this article
Cite this article
Blanco Gonzalez, E., Murakami, T., Teshima, Y. et al. Paternity testing of wild black rockfish Sebastes inermis (brownish type) from the Seto Inland Sea of Japan. Ichthyol Res 56, 87–91 (2009). https://doi.org/10.1007/s10228-008-0055-0
Received:
Revised:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s10228-008-0055-0