Abstract
Sediment respiration, a key function of the lotic ecosystem, can be determined by various methods at different scales; a method used commonly is percolation columns. Sediments are often homogenised before measuring their respiration, to obtain a representative sample. This study aimed at determining whether homogenisation influences sediment respiration measured with percolation columns. Sediment cores from sandy streams with either grassland or forested riparian vegetation were placed undisturbed in columns and percolated for 85 h in winter and late spring. After 45.75 h, half of the columns were homogenised. Independent of origin and respiration rates, homogenisation did not influence the sediment respiration. This suggests that if sediment homogenisation is performed, it will not influence sediment respiration determined with percolation columns.
References
Battin TJ, Kaplan LA, Findlay S, Hopkinson CS, Marti E, Packman AI, Newbold JD, Sabater F (2008) Biophysical controls on organic carbon fluxes in fluvial networks. Nat Geosci 1:95–100. https://doi.org/10.1038/ngeo101
Bott TL, Newbold JD, Arscott DB (2006) Ecosystem metabolism in piedmont streams: reach geomorphology modulates the influence of riparian vegetation. Ecosystems 9:398–421. https://doi.org/10.1007/s10021-005-0086-6
Boynton WR, Kemp WM, Osborne CG, Kaumeyer KR, Jenkins MC (1981) Influence of water circulation rate on in situ measurements of benthic community respiration. Mar Biol 65:185–190. https://doi.org/10.1007/bf00397084
Carr GM, Morin A (2002) Sampling variability and the design of bacterial abundance and production studies in aquatic environments. Can J Fish Aquat Sci 59:930–937. https://doi.org/10.1139/F02-072
Davidson EA, Janssens IA (2006) Temperature sensitivity of soil carbon decomposition and feedbacks to climate change. Nature 440:165–173. https://doi.org/10.1038/nature04514
Development Core Team R (2010) R: a language and environment for statistical computing. Austria, Vienna
Frossard A, Gerull L, Mutz M, Gessner MO (2013) Shifts in microbial community structure and function in stream sediments during experimentally simulated riparian succession. FEMS Microbiol Ecol 84:398–410. https://doi.org/10.1111/1574-6941.12072
Gerull L, Frossard A, Gessner MO, Mutz M (2011) Variability of heterotrophic metabolism in small stream corridors of an early successional watershed. J Geophys Res: Biogeosci 116:G02012. https://doi.org/10.1029/2010JG001516
Gerull L, Frossard A, Gessner MO, Mutz M (2012) Effects of shallow and deep sediment disturbance on whole-stream metabolism in experimental sand-bed flumes. Hydrobiologia 683:297–310. https://doi.org/10.1007/s10750-011-0968-x
Gerwin W, Schaaf W, Biemelt D, Fischer A, Winter S, Hüttl RF (2009) The artificial catchment “Chicken Creek” (Lusatia, Germany)—a landscape laboratory for interdisciplinary studies of initial ecosystem development. Ecol Eng 35:1786–1796. https://doi.org/10.1016/j.ecoleng.2009.09.003
Grimm N, Fisher S (1984) Exchange between interstitial and surface water: implications for stream metabolism and nutrient cycling. Hydrobiologia 111:219–228. https://doi.org/10.1007/bf00007202
Haggerty R, Marti E, Argerich A, von Schiller D, Grimm NB (2009) Resazurin as a “smart” tracer for quantifying metabolically active transient storage in stream ecosystems. J Geophys Res Biogeosci. https://doi.org/10.1029/2008jg000942
Hargrave BT (1972) Aerobic decomposition of sediment and detritus as a function of particle surface area and organic content. Limnol Oceanogr 17:583–596. https://doi.org/10.4319/lo.1972.17.4.0583
Hutchinson PA, Webster IT (1998) Solute uptake in aquatic sediments due to current-obstacle interactions. J Environ Eng 124:419–426. https://doi.org/10.1061/(ASCE)0733-9372(1998)124:5(419)
Lamade E, Djegui N, Leterme P (1996) Estimation of carbon allocation to the roots from soil respiration measurements of oil palm. Plant Soil 181:329–339. https://doi.org/10.1007/bf00012067
Mendoza-Lera C, Frossard A, Knie M, Federlein LL, Gessner MO, Mutz M (2016) Importance of advective mass transfer and sediment surface area for streambed microbial communities. https://doi.org/10.1111/fwb.12856
Mori N, Debeljak B, Kocman D, Simčič T (2016) Testing the influence of sediment granulometry on heterotrophic respiration with a new laboratory flow-through system. J Soils Sediments 16:1–9. https://doi.org/10.1007/s11368-016-1613-0
Novitsky JA (1983) Microbial activity at the sediment-water interface in Halifax Harbor, Canada. Appl Environ Microbiol 45:1761–1766 (0099-2240/83/061761-06$02.00/0)
Olsen DA, Townsend CR (2005) Flood effects on invertebrates, sediments and particulate organic matter in the hyporheic zone of a gravel-bed stream. Freshwat Biol 50:839–853. https://doi.org/10.1111/j.1365-2427.2005.01365.x
Pace ML, Prairie YT (2005) Respiration in lakes. In: del Giorgio P, Williams P (eds) Respiration in aquatic ecosystems. Oxford University Press, New York, pp 103–121
Risse-Buhl U, Mendoza-Lera C, Norf H, Pérez J, Pozo J, Schlief J (2017) Contrasting habitats but comparable microbial decomposition in the benthic and hyporheic zone 605–606:683–691. https://doi.org/10.1016/j.scitotenv.2017.06.203
Roberts B, Mulholland P, Hill W (2007) Multiple scales of temporal variability in ecosystem metabolism rates: results from 2 years of continuous monitoring in a forested headwater stream. Ecosystems 10:588–606. https://doi.org/10.1007/s10021-007-9059-2
Thomson BC, Ostle NJ, McNamara NP, Whiteley AS, Griffiths RI (2010) Effects of sieving, drying and rewetting upon soil bacterial community structure and respiration rates. J Microbiol Methods 83:69–73. https://doi.org/10.1016/j.mimet.2010.07.021
Uehlinger U, Naegeli MW (1998) Ecosystem metabolism, disturbance, and stability in a prealpine gravel bed river. J North Am Benthological Soc 17:165–178. https://doi.org/10.2307/1467960
Zlatanović S, Fabian J, Mendoza-Lera C, Woodward KB, Premke K, Mutz M (2017) Periodic sediment shift in migrating ripples influences benthic microbial activity. Water Resour Res. https://doi.org/10.1002/2017wr020656
Acknowledgements
I am grateful to R. Ender, J. Krahl and L. Zipfel for their help with laboratory and field work and to M. Mutz, U. Risse-Buhl and V. K. Notay for the suggestions that improved the manuscript. This study was part of the Transregional Collaborative Research Center 38 (SFB/TRR 38), which was financially supported by the German Research Foundation (DFG, Bonn, Germany), Brandenburg Ministry of Science, Research and Culture (MWFK, Potsdam, Germany), and Basque Country Government (Spain; doctoral grant BFI 09.338). I thank Vattenfall Europe Mining AG for providing the sampling site CC.
Author information
Authors and Affiliations
Corresponding author
Additional information
Handling Editor: Qinglong Wu.
Rights and permissions
About this article
Cite this article
Mendoza-Lera, C. Does homogenisation of stream bed sediment samples influence their respiration?. Limnology 19, 165–169 (2018). https://doi.org/10.1007/s10201-017-0531-1
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s10201-017-0531-1