Abstract
DNA sequence information has been obtained for 2 genes implicated in playing critical roles in copepod development. The first (Cal-antp) was obtained by screening a Calanus helgolandicus genomic library. It shows homology to Antennapedia homeobox genes from a number of organisms including the centipede (76.8% over 250 bp) and the brine shrimp (75.5% over 220 bp). A second sequence (Hox 12) was obtained through reverse transcription polymerase chain reaction (PCR) of a solid-phase cDNA library constructed from Calanus eggs, and subsequent inverse PCR using a genomic DNA template. The Hox 12 sequence is homologous to the Antennapedia class of genes and shares homology with the chicken HoxB3 gene (71% over 187 bp) and with the fruit fly Sex Combs Reduced (Scr) homeotic gene (66% identity over 223 bp). Using sequence data from Cal-Antp and Hox 12, specific primers were designed to investigate the temporal expression of these genes by PCR analysis of 10 stage-specific cDNA libraries.
Similar content being viewed by others
References
M. Akam (1989) ArticleTitle Hox and HOM: homologous gene clusters in insects and vertebrates. Cell 57 347–349 Occurrence Handle1:CAS:528:DyaL1MXktVWlsrY%3D Occurrence Handle2566382
J.W. Ambler (1985) ArticleTitleSeasonal factors affecting egg production and viability of eggs of Acartia tonsa Dana from East Lagoon, Galveston, Texas. Estuar Coast Shelf Sci 20 743–760
M. Averof M. Akam (1993) ArticleTitleHOM/Hox genes of Artemia: implications for the origin of insect and crustacean body plans. Curr Biol 3 73–78 Occurrence Handle1:CAS:528:DyaK3sXkt1WrtLo%3D
S. Ban C. Burns J. Castel Y. Chaudron E. Christou R. Escribano S.F. Umani S. Gasparini F.G. Ruiz M. Hoffmeyer I. Ianora H.-K. Kang M. Laabir A. Lacoste A. Miralto X. Ning S. Poulet V. Rodriguez J. Runge J. Shi M. Starr S.-I. Uye Y. Wang (1997) ArticleTitleThe paradox of diatom-copepod interactions. Mar Ecol Prog Ser 157 287–293
Bürglin, T.R. (1994) “A comprehensive classification of homeobox genes.” In; Duboule, D (Ed.), Guidebook to the homeobox genes, Oxford University Press, Oxford, pp 25–73
F. Casares R.S. Mann (1998) ArticleTitleControl of antennal versus leg development in Drosophila. Nature 392 723–726 Occurrence Handle10.1038/33706 Occurrence Handle1:CAS:528:DyaK1cXjtVWgt7o%3D Occurrence Handle9565034
R.J. Conover S. Wilson G.C.H. Harding W.P. Vass (1995) ArticleTitleClimate, copepods and cod: some thoughts on the long-range prospects for a sustainable northern cod fishery. Climate Res 5 69–82
R.R. Dickson K.M. Brander (1993) ArticleTitleEffects of a changing windfield on cod stocks of the North Atlantic. Fish Oceanogr 2 124–153
D. Duboule (1998) Guidebook to the Homeobox Genes. New YorK, N.Y. Oxford University Press Inc
B.S. Emerald S.M. Cohen (2001) ArticleTitleLimb development: getting down to the ground state. Curr Biol 11 R1025–R1027 Occurrence Handle10.1016/S0960-9822(01)00616-9 Occurrence Handle11747840
J.K. Grenier T.L. Garber R. Warren P.M. Whitington S. Caroll (1997) ArticleTitleEvolution of the entire arthropod Hox gene set predated the origin and radiation of the onychophoran/arthropod clade. Curr Biol 7 547–553 Occurrence Handle1:CAS:528:DyaK2sXltlalurs%3D Occurrence Handle9259556
C. Grobben (1881) ArticleTitleDie Entwicklungsgeschichtw von Cetochilus septentrionalis Goodsir. Arb Zool Inst Univ Wien 3 1–40
D.C. Hayward N.H. Patel E.J. Rehm C.S. Goodman E.E. Ball (1995) ArticleTitleSequence and expression of grasshopper Antennapedia: comparison to Drosophila. Dev Biol 172 452–465 Occurrence Handle10.1006/dbio.1995.8030 Occurrence Handle1:CAS:528:DyaK28XhtVeruw%3D%3D Occurrence Handle8612963
P.W. Holland L.Z. Holland N.A. Williams N.D. Holland (1992) ArticleTitleAn amphioxus homeobox gene: sequence conservation, spatial expression during development and insights into vertebrate evolution. Development 116 653–661 Occurrence Handle1:CAS:528:DyaK3sXitVKmur4%3D Occurrence Handle1363226
V.A. Jaschnov (1970) ArticleTitleDistribution of Calanus species in the sea of the Northern Hemisphere. Int Rev Gesamten Hydrobiol 55 197–212
C. Kappen K. Schughart F.H. Ruddle (1989) ArticleTitleTwo steps in the evolution of Antennapedia-class vertebrate homeobox genes. Proc Natl Acad Sci USA 86 5459–5463 Occurrence Handle1:CAS:528:DyaL1MXkvFWmu74%3D Occurrence Handle2568634
G.S. Kleppel (1993) ArticleTitleOn the diets of Calanoid copepods. Mar Ecol Prog Ser 99 183–195
R. Krumlauf (1992) ArticleTitleEvolution in the vertebrate Hox homeobox genes. Bioessays 14 245–252 Occurrence Handle1:CAS:528:DyaK38XksVCrt7Y%3D Occurrence Handle1350721
P.K. LeMotte A. Kuroiwa L.I. Fessler W.J. Gehring (1989) ArticleTitleThe homeotic gene Sex Combs Reduced of Drosophila: gene structure and embryonic expression. EMBO J 8 219–227 Occurrence Handle1:CAS:528:DyaL1MXmt1Kht7Y%3D Occurrence Handle2565809
B. Lewin (1997) Regulation of transcription. B Lewin (Eds) Genes VI. Oxford University Press New York, N.Y. 847–883
W. McGinnis M.S. Levine E. Hafen A. Kuroiwa W.G. Gehring (1984) ArticleTitleA conserved DNA sequence in homeotic genes of the Drosophila Antennapedia and bithorax complexes. Nature 308 428–433 Occurrence Handle1:CAS:528:DyaL2cXhs12gsb4%3D Occurrence Handle6323992
I.A. McLaren J.M. Sevigny C.J. Corkett (1988) ArticleTitleBody sizes, development rates, and genome sizes among Calanus species. Hydrobiologia 167/168 275–284
A. Miralto G. Barone G. Romano S. Poulet A. Ianora G.L. Russo I. Buttino G. Mazzarella M. Laabir M. Cabrini M.G. Giacobbe (1999) ArticleTitleThe insidious effect of diatoms on copepod reproduction. Nature 402 173–176 Occurrence Handle10.1038/46023 Occurrence Handle1:CAS:528:DyaK1MXnsVekt78%3D
Orlova, E.L., Ushakov, N.G., Nesterova, V.N., and Pushchaeve, T.Y. (1999). Year-to-year variations in consumption of C. finmarchicus by capelin Mallotus villosus and peculiarities of the capelin growth in high latitudes in the Barents Sea. Presented at the ICES Symposium: Population Dynamics of Calanus in the North Atlantic—results from the Trans-Atlantic Study of Calanus finmarchicus.
D. Pond R. Harris R. Head D. Harbour (1996) ArticleTitleEnvironmental and nutritional factors determining seasonal variability in the fecundity and egg viability of Calanus helogolandicus in coastal waters off Plymouth, UK. Mar Ecol Prog Ser 143 45–63
L. Reid (1990) ArticleTitleFrom gradients to axes, from morphogenesis to differentiation. Cell 63 875–882 Occurrence Handle1:STN:280:By6D2sjpt1I%3D Occurrence Handle1979523
M. Rex P.J. Scotting (1994) ArticleTitleChick HoxB3: deduced amino-acid sequence and embryonic gene expression. Gene 149 381–382 Occurrence Handle10.1016/0378-1119(94)90183-X Occurrence Handle1:CAS:528:DyaK2MXitFOltLw%3D Occurrence Handle7959024
J.A. Runge (1988) ArticleTitleShould we expect a relationship between primary production and fisheries? The role of copepod dynamics as a filter of trophic variability. Hydrobiology 167/168 61–71
J.A. Runge Y.D. Lafontaine (1996) ArticleTitleCharacterisation of the pelagic ecosystem in surface waters of the northern Gulf of St. Lawrence in early summer: the larval redfish–Calanus–microplankton interaction. Fish Oceanogr 5 1–20
S.J. Salser C. Kenyon (1996) ArticleTitleA C-elegans Hox gene switches on, off, on and off again to regulate proliferation, differentiation and morphogenesis. Development 122 1651–1661 Occurrence Handle1:CAS:528:DyaK28Xjt1GisLo%3D Occurrence Handle8625851
F. Sanger S. Nicklen A.R. Coulson (1977) ArticleTitleDNA sequencing with chain-termination inhibitors. Proc Natl Acad Sci USA 75 5463–5467
F.R. Schubert K. Nieselt-Struwe P. Gruss (1993) ArticleTitleThe Antennapedia-type homoebox genes have evolved from three precursors separated early in metazoan evolution. Proc Natl Acad Sci USA 90 143–147 Occurrence Handle1:CAS:528:DyaK3sXhtFOrtbs%3D Occurrence Handle8093557
M.P. Scott (1994) ArticleTitleIntimations of a creature. Cell 79 1121–1124 Occurrence Handle1:CAS:528:DyaK2MXivVWqurY%3D
M.P. Scott A.J. Weiner (1984) ArticleTitleStructural relationships among genes that control development: sequence homology between the Antennapedia, Ultrabithorax, and fushi tarazu loci of Drosophila. Proc Natl Acad Sci USA 81 4115–4119 Occurrence Handle1:CAS:528:DyaL2cXltVGis7Y%3D Occurrence Handle6330741
P.J. Scotting M. Hewitt R.J. Keynes (1990) ArticleTitleIsolation and analysis of chick homeobox cDNA clones. Nucleic Acids Res 18 3999 Occurrence Handle1:CAS:528:DyaK3cXlt1Onu7s%3D Occurrence Handle1973835
J.M.W. Slack (1997) The anteroposterior system. P.W. Barlow D. Bray P.B. Green J.M.W. Slack (Eds) From Egg to Embryo, 2nd ed. Cambridge University Press Cambridge, U.K. 236–260
G.R. Smerdon (1998) Towards the molecular analysis of copepod production. K.C. Cooksey (Eds) Molecular Approaches to the Study of the Ocean. Chapman and Hall London, U.K. 319–328
E. Southern (1975) ArticleTitleDetection of specific sequences among DNA fragments separated by gel electrophoresis. J Mol Biol 98 503–517 Occurrence Handle1:CAS:528:DyaE28XktVeltQ%3D%3D Occurrence Handle1195397
A. Trujillo-Ortiz (1995) ArticleTitleAlternative method for the calculation of mean time for the assessment of secondary production by true cohort analysis. J Plankton Res 17 2175–2190
U. Walldorf P. Binner R. Fleig (2000) ArticleTitle Hox genes in the honey bee Apis mellifera. Dev Genes W Evol 210 483–492 Occurrence Handle10.1007/s004270000091 Occurrence Handle1:CAS:528:DC%2BD3cXnvVKktbw%3D
Acknowledgements
This work was funded by the NERC Thematic Programme “Marine Productivity” and benefited from the use of the SEQNET facility. All experiments comply with the current laws of the United Kingdom.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Lindeque, P.K., Smerdon, G.R. Temporal Transcription of Two Antennapedia Class Homeobox Genes in the Marine Copepod Calanus helgolandicus . Mar. Biotechnol. 5, 604–615 (2003). https://doi.org/10.1007/s10126-002-0119-5
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s10126-002-0119-5