Asami, T., Nakano, T., and Fujioka, S. (2005). Plant brassinosteroid hormones. Vitam. Horm. 72, 479–504.
Article
CAS
PubMed
Google Scholar
Bao, F., Shen, J., Brady, S.R., Muday, G.K., Asami, T., and Yang, Z. (2004). Brassinosteroids interact with auxin to promote lateral root development in Arabidopsis. Plant Physiol. 134, 1624–1631.
Article
CAS
PubMed
Google Scholar
Belkhadir, Y., and Chory, J. (2006). Brassinosteroid signaling: a paradigm for steroid hormone signaling from the cell surface. Science 314, 1410–1411.
Article
CAS
PubMed
Google Scholar
Clough, S.J., and Bent, A.F. (1998). Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J. 16, 735–743.
Article
CAS
PubMed
Google Scholar
Clouse, S.D. (1996). Molecular genetic studies confirm the role of brassinosteroids in plant growth and development. Plant J. 10, 1–8.
Article
CAS
PubMed
Google Scholar
Dharmasiri, N., Dharmasiri, S., Weijers, D., Lechner, E., Yamada, M., Hobbie, L., Ehrismann, J.S., Jürgens, G., and Estelle, M. (2005). Plant development is regulated by a family of auxin receptor F box proteins. Dev. Cell 9, 109–119.
Article
CAS
PubMed
Google Scholar
Fujioka, S., and Yokota, T. (2003). Biosynthesis and metabolism of brassinosteroids. Annu. Rev. Plant Biol. 54, 137–164.
Article
CAS
PubMed
Google Scholar
Goda, H., Shimada, Y., Asami, T., Fujioka, S., and Yoshida, S. (2002). Microarray analysis of brassinosteroid-regulated genes in Arabidopsis. Plant Physiol. 13, 1319–1334.
Article
Google Scholar
Goda, H., Sawa, S., Asami, T., Fujioka, S., Shimada, Y., and Yoshida, S. (2004). Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis. Plant Physiol. 134, 1555–1573.
Article
CAS
PubMed
Google Scholar
Guilfoyle, T.J., and Hagen, G. (2007). Auxin response factors. Curr. Opin. Plant Biol. 10, 453–460.
Article
CAS
PubMed
Google Scholar
He, J.X., Gendron, J.M., Yang, Y., Li, J., and Wang, Z.Y. (2002). The GSK3-like kinase BIN2 phosphorylates and destabilizes BZR1, a positive regulator of the brassinosteroid signaling pathway in Arabidopsis. Proc. Natl. Acad. Sci. USA 99, 10185–10190.
Article
CAS
PubMed
Google Scholar
Kepinski, S., and Leyser, O. (2005). The Arabidopsis F-box protein TIR1 is an auxin receptor. Nature 435, 446–451.
Article
CAS
PubMed
Google Scholar
Kim, T.W., Lee, S.M., Joo, S.H., Yun, H.S., Lee, Y., Kaufman, P.B., Kirakosyan, A., Kim, S.H., Nam, K.H., Lee, J.S., et al. (2007). Elongation and gravitropic responses of Arabidopsis roots are regulated by brassinolide and IAA. Plant Cell Environ. 30, 679–689.
Article
CAS
PubMed
Google Scholar
Leyser, H.M., Pickett, F.B., Dharmasiri, S., and Estelle, M. (1996). Mutations in the AXR3 gene of Arabidopsis result in altered auxin response including ectopic expression from the SAURAC1 promoter. Plant J. 10, 403–413.
Article
CAS
PubMed
Google Scholar
Liu, Y.G., Mitsukawa, N., Oosumi, T., and Whittier, R.F. (1995). Efficient isolation and mapping of Arabidopsis thaliana T-DNA insert junctions by thermal asymmetric interlaced PCR. Plant J. 8, 457–463.
Article
CAS
PubMed
Google Scholar
Mallory, A.C., Bartel, D.P., and Bartel, B. (2005). MicroRNA-directed regulation of Arabidopsis AUXIN RESPONSE FACTOR17 is essential for proper development and modulates expression of early auxin response genes. Plant Cell 17, 1360–1375.
Article
CAS
PubMed
Google Scholar
Mora-García, S., Vert, G., Yin, Y., Caño-Delgado, A., Cheong, H., and Chory, J. (2004). Nuclear protein phosphatases with Kelchrepeat domains modulate the response to brassinosteroids in Arabidopsis. Genes Dev. 18, 448–460.
Article
PubMed
Google Scholar
Nakamoto, D., Ikeura, A., Asami, T., and Yamamoto, K.T. (2006). Inhibition of brassinosteroid biosynthesis by either a dwarf4 mutation or a brassinosteroid biosynthesis inhibitor rescues defects in tropic responses of hypocotyls in the Arabidopsis mutant nonphototropic hypocotyl 4. Plant Physiol. 141, 456–464.
Article
CAS
PubMed
Google Scholar
Nakamura, A., Higuchi, K., Goda, H., Fujiwara, MT., Sawa, S., Koshiba, T., Shimada, Y., and Yoshida, S. (2003a). Brassinolide induces IAA5, IAA19, and DR5, a synthetic auxin response element in Arabidopsis, implying a cross talk point of brassinosteroid and auxin signaling. Plant Physiol. 133, 1843–1853.
Article
CAS
PubMed
Google Scholar
Nakamura, A., Shimada, Y., Goda, H, Fujiwara, M.T., Asami, T., and Yoshida, S. (2003b). AXR1 is involved in BR-mediated elongation and SAUR-AC1 gene expression in Arabidopsis. FEBS Lett. 553, 28–32.
Article
CAS
PubMed
Google Scholar
Nakamura, M., Satoh, T., Tanaka, S., Mochizuki, N., Yokota, T., and Nagatani, A. (2005). Activation of the cytochrome P450 gene, CYP72C1, reduces the levels of active brassinosteroids in vivo. J. Exp. Bot. 56, 833–840.
Article
CAS
PubMed
Google Scholar
Nakamura, A., Nakajima, N., Goda, H., Shimada, Y., Hayashi, K., Nozaki, H., Asami, T., Yoshida, S., and Fujioka, S. (2006). Arabidopsis Aux/IAA genes are involved in brassinosteroidmediated growth responses in a manner dependent on organ type. Plant J. 45, 193–205.
Article
CAS
PubMed
Google Scholar
Neff, M.M., Nguyen, S.M., Malancharuvil, E.J., Fujioka, S., Noguchi, T., Seto, H., Tsubuki, M., Honda, T., Takatsuto, S., Yoshida, S., et al. (1999). BAS1: A gene regulating brassinosteroid levels and light responsiveness in Arabidopsis. Proc. Natl. Acad. Sci. USA 96, 15316–15323.
Article
CAS
PubMed
Google Scholar
Nemhauser, J.L., Mockler, T.C., and Chory, J. (2004). Interdependency of brassinosteroid and auxin signaling in Arabidopsis. PLoS Biol. 2, E258.
Article
PubMed
Google Scholar
Park, J.E., Park, J.Y., Kim, Y.S., Staswick, P.E., Jeon, J., Yun, J., Kim, S.Y., Kim, J., Lee, Y.H., and Park, C.M. (2007). GH3-mediated auxin homeostasis links growth regulation with stress adaptation response in Arabidopsis. J. Biol. Chem. 282, 10036–10046.
Article
CAS
PubMed
Google Scholar
Parry, G., and Estelle, M. (2006). Auxin receptors: a new role for F-box proteins. Curr. Opin. Cell Biol. 18, 152–156.
Article
CAS
PubMed
Google Scholar
Pfeffer, S., Lagos-Quintana, M., and Tuschl, T. (2003). Cloning of small RNA molecules. In current protocols in molecular biology. F.M. Ausubel, R. Brent, R.E. Kingston, D.D. Moore, J.G. Seidmann, J.A. Smith, and K. Struhl, eds. (New York: Wiley and Sons), pp. 26.
Google Scholar
Seo, P.J., Xiang, F., Qiao, M., Park, J.Y., Lee, Y.N., Kim, S.G., Lee, Y.H., Park, W.J., and Park, C.M. (2009). The MYB96 transcription factor mediates abscisic acid signaling during drought stress response in Arabidopsis. Plant Physiol. 151, 275–289.
Article
CAS
PubMed
Google Scholar
Staswick, P.E., Tiryaki, I., and Rowe, M.L. (2002). Jasmonate response locus JAR1 and several related Arabidopsis genes encode enzymes of the firefly luciferase superfamily that show activity on jasmonic, salicylic, and indole-3-acetic acids in an assay for adenylation. Plant Cell 14, 1405–1415.
Article
CAS
PubMed
Google Scholar
Takahashi, N., Nakazawa, M., Shibata, K., Yokota, T., Ishikawa, A., Suzuki, K., Kawashima, M., Ichikawa, T., Shimada, H., and Matsui, M. (2005). shk1-D, a dwarf Arabidopsis mutant caused by activation of the CYP72C1 gene, has altered brassinosteroid levels. Plant J. 42, 13–22.
Article
CAS
PubMed
Google Scholar
Tan, X., Calderon-Villalobos, L.I., Sharon, M., Zheng, C., Robinson, C.V., Estelle, M., and Zheng, N. (2007). Mechanism of auxin perception by the TIR1 ubiquitin ligase. Nature 446, 640–645.
Article
CAS
PubMed
Google Scholar
Tian, C.E., Muto, H., Higuchi, K., Matamura, T., Tatematsu, K., Koshiba, T., and Yamamoto, K.T. (2004). Disruption and overexpression of auxin response factor 8 gene of Arabidopsis affect hypocotyl elongation and root growth habit, indicating its possible involvement in auxin homeostasis in light condition. Plant J. 40, 333–343.
Article
CAS
PubMed
Google Scholar
Tiwari, S.B., Hagen, G., and Guilfoyle, T.J. (2004). Aux/IAA proteins contain a potent transcriptional repression domain. Plant Cell 16, 533–543.
Article
CAS
PubMed
Google Scholar
Turk, E.M., Fujioka, S., Seto, H., Shimada, Y., Takatsuto, S., Yoshida, S., Denzel, M.A., Torres, Q.I., and Neff, M.M. (2003). CYP72B1 inactivates brassinosteroid hormones: an intersection between photomorphogenesis and plant steroid signal transduction. Plant Physiol. 133, 1643–1653.
Article
CAS
PubMed
Google Scholar
Turk, E.M., Fujioka, S., Seto, H., Shimada, Y., Takatsuto, S., Yoshida, S., Wang, H., Torres, Q.I., Ward, J.M., Murthy, G., et al. (2005). BAS1 and SOB7 act redundantly to modulate Arabidopsis photomorphogenesis via unique brassinosteroid inactivation mechanisms. Plant J. 42, 23–34.
Article
CAS
PubMed
Google Scholar
Vanneste, S., and Friml, J. (2009) Auxin: a trigger for change in plant development. Cell 136, 1005–1016.
Article
CAS
PubMed
Google Scholar
Vert, G., and Chory, J. (2006). Downstream nuclear events in brassinosteroid signalling. Nature 441, 96–100.
Article
CAS
PubMed
Google Scholar
Vert, G., Walcher, C.L., Chory, J., and Nemhauser, J.L. (2008). Integration of auxin and brassinosteroid pathways by Auxin response factor 2. Proc. Natl. Acad. Sci. USA 105, 9829–9834.
Article
CAS
PubMed
Google Scholar
Wang, X., Goshe, M.B., Soderblom, E.J., Phinney, B.S., Kuchar, J.A., Li, J., Asami, T., Yoshida, S., Huber, S.C., and Clouse, S.D. (2005a). Identification and functional analysis of in vivo phosphorylation sites of the Arabidopsis BRASSINOSTEROIDINSENSITIVE1 receptor kinase. Plant Cell 17, 1685–1703.
Article
CAS
PubMed
Google Scholar
Wang, X., Li, X., Meisenhelder, J., Hunter, T., Yoshida, S., Asami, T., and Chory, J. (2005b). Autoregulation and homodimerization are involved in the activation of the plant steroid receptor BRI1. Dev. Cell 8, 855–865.
Article
CAS
PubMed
Google Scholar
Weigel, D., Ahn, J.H., Blázquez, M.A., Borevitz, J.O., Christensen, S.K., Fankhauser, C., Ferrandiz, C., Kardailsky, I., Malancharuvil, E.J., Neff, M.M., et al. (2000). Activation tagging in Arabidopsis. Plant Physiol. 122, 1003–1013.
Article
CAS
PubMed
Google Scholar
Wu, M.F., Tian, Q., and Reed, J.W. (2006). Arabidopsis microRNA167 controls patterns of ARF6 and ARF8 expression, and regulates both female and male reproduction. Development 133, 4211–4218.
Article
CAS
PubMed
Google Scholar
Yang, J.H., Han, S.J., Yoon, E.K., and Lee, W.S. (2006). Evidence of an auxin signal pathway, microRNA167-ARF8-GH3, and its response to exogenous auxin in cultured rice cells. Nucleic Acids Res. 34, 1892–1899.
Article
CAS
PubMed
Google Scholar
Yin, Y., Wang, Z.Y., Mora-Garcia, S., Li, J., Yoshida, S., Asami, T., and Chory, J. (2002). BES1 accumulates in the nucleus in response to brassinosteroids to regulate gene expression and promote stem elongation. Cell 109, 181–191.
Article
CAS
PubMed
Google Scholar
Yin, Y., Vafeados, D., Tao, Y., Yoshida, S., Asami, T., and Chory, J. (2005). A new class of transcription factors mediates brassinosteroid-regulated gene expression in Arabidopsis. Cell 120, 249–259.
Article
CAS
PubMed
Google Scholar
Yun, H.S., Bae, Y.H., Lee, Y.J., Chang, S.C., Kim, S.K., Li, J., and Nam, K.H. (2009). Analysis of phosphorylation of the BRI1/BAK1 complex in arabidopsis reveals amino acid residues critical for receptor formation and activation of BR signaling. Mol. Cells 27, 183–190.
Article
CAS
PubMed
Google Scholar