Abstract
We have developed a system for measuring the orientation of single molecules using a conventional wide-field fluorescence microscope with a polarization filter consisting of a polarizer and a compact polarization mode converter. The polarization filter electrically controls the pattern of polarization filtering. Since the polarization of the fluorescence from a single molecule highly depends on the angle between the observation direction and the molecular direction, polarization pattern filtering at the pupil plane of the objective lens allows the orientation of a single molecule to be visualized. Using this system, we demonstrated the orientation detection of single molecules.
Similar content being viewed by others
References
Neil, M.A.A., Wilson, T., Juškaitis, R.: A wavefront generator for complex pupil function synthesis and point spread function engineering. J. Microsc. 197, 219 (2000)
Quabis, S., Dorn, R., Eberler, M., Glöckl, O., Leuchs, G.: Focusing light to a tighter spot. Opt. Commun. 179, 1–7 (2000)
Youngworth, K.S., Brown, T.G.: Focusing of high numerical aperture cylindrical vector beams. Opt. Express 7, 77–87 (2000)
Sheppard, C.J.R., Choudhury, A.: Annular pupils, radial polarization, and superresolution. Appl. Opt. 43, 4322–4327 (2000)
Hashimoto, M., Yamada, K., Araki, T.: Proposition of single molecular orientation determination using polarization controlled beam by liquid crystal spatial light modulators. Opt. Rev. 12, 37–41 (2005)
Yoshiki, K., Hashimoto, M., Araki, T.: Second-harmonic-generation microscopy using excitation beam with controlled polarization pattern to determine three-dimensional molecular orientation. Jpn. J. Appl. Phys. 44, L1066–L1068 (2005)
Yoshiki, K., Kanamaru, R., Hashimoto, M., Hashimoto, N., Araki, T.: Second-harmonic-generation microscope using eight-segment polarization-mode converter to observe three-dimensional molecular orientation. Opt. Lett. 32, 1680–1682 (2007)
Abouraddy, A.F., Toussaint Jr, K.C.: Three-dimensional polarization control in microscopy. Phys. Rev. Lett. 96, 153901 (2006)
Novotny, L., Beversluis, M.R., Youngworth, K.S., Brown, T.G.: Longitudinal field modes probed by single molecules. Phys. Rev. Lett. 86, 5251–5254 (2001)
Ishitobi, H., Nakamura, I., Hayazawa, N., Sekkat, Z., Kawata, S.: Orientational imaging of single molecules by using azimuthal and radial polarizations. J. Phys. Chem. B 114, 2565–2571 (2010)
Jares-Erijman, E.A., Jovin, T.M.: FRET imaging. Nat. Biotechnol. 21, 1387–1395 (2003)
Patra, D., Gregor, I., Enderlein, J.: Image analysis of defocused single-molecule images for three-dimensional molecule orientation studies. J. Phys. Chem. 108, 6836–6841 (2004)
Backer, A.S., Backlund, M.P., Lew, M.D., Moerner, W.E.: Single-molecule orientation measurements with a quadrated pupil. Opt. Lett. 38, 1521–1523 (2013)
Pavania, S.R.P., Thompson, M.A., Biteen, J.S., Lord, S.J., Liu, N., Twieg, R.J., Piestun, R., Moerner, W.E.: Three-dimensional, single-molecule fluorescence imaging beyond the diffraction limit by using a double-helix point spread function. Proc. Nat. Acad. Sci. USA 106, 2997–2999 (2009)
Fourkas, J.T.: Rapid determination of the three-dimensional orientation of single molecules. Opt. Lett. 26, 211–213 (2001)
Acknowledgments
We would like to thank Mr. Aikawa and Mr. Kanamaru (Osaka University) for helping with the experiments.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Hashimoto, M., Yoshiki, K., Kurihara, M. et al. Orientation detection of a single molecule using pupil filter with electrically controllable polarization pattern. Opt Rev 22, 875–881 (2015). https://doi.org/10.1007/s10043-015-0143-0
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s10043-015-0143-0