Abstract
Quinolinone-chalcones are hybrid compounds consisting of chalcone and quinolone moieties with biological activity related to their hybrid structure. This work seeks to describe the structural and theoretical parameters related to the physicochemical properties and biological activity of a new quinolinone-chalcone. The synthesis, structural characterization by X-ray diffraction, molecular topology by Hirshfeld surfaces and QTAIM, molecular electronic calculations, and pharmacophore analysis were described. The weak interactions C–H…O, C–H…π, and C–H…Br were responsible for crystal growth and stabilized the crystalline state. The DFT analysis shows that the sulfonamide group region is susceptible to observed interactions, and the frontier molecular orbitals indicate high kinetic stability. Also, pharmacophore analysis revealed potential antibacterial and herbicidal activity; by docking within the active site of TtgR, a transcription regulator for the efflux pump TtgABC from the highly resistant Pseudomonas putida (P. putida) strain DOT-TIE, we showed that the activation of TtgR relies upon the binding of aromatic-harboring compounds, which plays a crucial role in bacterial evasion. In this context, a new quinolinone-chalcone has a higher binding affinity than tetracycline, which suggests it might be a better effector for TtgR.
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Data availability
The datasets generated during and analyzed during the current study are available in the Cambridge Crystallographic Data Centre (CCDC), under the code 1,934,999 (https://www.ccdc.cam.ac.uk/structures/?).
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Acknowledgements
The authors would like to thank Brazilian funding agencies Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) and Coordenação de Aperfeiçoamento Pessoal de Nível Superior (CAPES) for financial support. QC X-ray data collection was undertaken at the University of Notre Dame. Theoretical calculations were performed in the High-Performance Computing Center of State University of Goiás. In addition, the authors thank Prof. Dr. Ademir Joao Camargo for fruitful discussion regarding the solvent effect calculations.
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This work was supported by Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) and Coordenação de Aperfeiçoamento Pessoal de Nível Superior (CAPES).
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Vitor S. Duarte: conceptualization, formal analysis, writing (original draft), writing (review and editing). Renata Layse G. de Paula: conceptualization, formal analysis, writing (original draft). Jean M. F. Custodio: conceptualization, revision, writing (original draft). Giulio D. C. D’Oliveira: synthesis, methodology, validation, writing (original draft), writing (review and editing). Leonardo L. Borges: methodology, validation, formal analysis, investigation, writing (original draft), writing (review and editing). Caridad Noda Pérez: synthesis, methodology, validation, writing (original draft), writing (review and editing). Pal Perjesi: conceptualization, formal analysis, writing (original draft). Allen G. Oliver: conceptualization, revision, writing (original draft). Hamilton B. Napolitano: conceptualization, investigation, resources, writing (original draft), writing (review and editing), supervision, and project administration.
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Duarte, V.S., Paula, R.L.G., Custodio, J.M.F. et al. A new quinolinone-chalcone hybrid with potential antibacterial and herbicidal properties using in silico approaches. J Mol Model 28, 176 (2022). https://doi.org/10.1007/s00894-022-05140-9
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DOI: https://doi.org/10.1007/s00894-022-05140-9