Abstract
Nitroxide probes have been commonly used for biomedical EPR imaging applications; however, image quality has been limited by the number of image projections, as well as the probe linewidth and hyperfine structure. In the current study, we evaluate the use of fast millisecond scan EPR projection acquisition along with a novel reconstruction algorithm optimized for 3D spatial EPR image reconstruction from a high number of noisy projections. This reconstruction method utilizes the raw image projection data and zero gradient spectrum to account for EPR line shape and hyperfine structure of any given paramagnetic probe without the need for deconvolution that is poorly suited for high noise data. Using fast scan EPR imaging with this reconstruction method, we image non-deuterated, deuterated and 15N substituted nitroxide probes in experimental phantoms of complex geometries. We evaluate the image resolution that can be obtained and the imaging time required. With 16,384 projections acquired over 1 min, and a field gradient of 8 G/cm, with a 2503 voxel 3D matrix, spatial resolutions of up to 100 µm are theoretically possible for a cubical volume of 25 × 25 × 25 mm3. In experiments with a variety of phantoms with mM nitroxide radical probes, resolutions of 600–250 µm were obtained with 1–10 min acquisitions, respectively. The presently obtainable signal sensitivity and noise levels of these acquisitions limited the obtainable resolution. With longer time acquisitions or further improvements in sensitivity and noise reduction, image resolutions approaching 100 µm should be possible.
Similar content being viewed by others
Availability of Data and Materials
Imaging data are available from the corresponding author upon request.
Code Availability
The reconstruction algorithm with an example of its application is available for download at https://gitlab.com/dkomarov/art3dx/ under the terms of the General Public License.
References
Z. Chen, L.A. Reyes, D.H. Johnson, M. Velayutham, C. Yang, A. Samouilov, J.L. Zweier, Fast gated EPR imaging of the beating heart: spatiotemporally resolved 3D imaging of free-radical distribution during the cardiac cycle. Magn. Reson. Med. 69, 594–601 (2013)
A. Samouilov, R. Ahmad, J. Boslett, X. Liu, S. Petryakov, J.L. Zweier, Development of a fast-scan EPR imaging system for highly accelerated free radical imaging. Magn. Reson. Med. 82, 842–853 (2019)
H. Sato-Akaba, H. Fujii, H. Hirata, Improvement of temporal resolution for three-dimensional continuous-wave electron paramagnetic resonance imaging. Rev. Sci Instrum. 79, 123701 (2008)
U. Ewert, K.-U. Thiessenhusen, Deconvolution for the stationary-gradient method, in: EPR imaging and in vivo EPR, CRC Press, 2018, pp. 119–126
F. Momo, S. Colacicchi, A. Sotgiu, Limits of deconvolution in enhancing the resolution in EPR imaging experiments. Meas. Sci. Technol. 4, 60 (1993)
P. Kuppusamy, J.L. Zweier, Hyperfine artifacts in electron paramagnetic resonance imaging. Res. Chem. Intermed. 22, 593–604 (1996)
P. Kuppusamy, J.L. Zweier, A forward-subtraction procedure for removing hyperfine artifacts in electron paramagnetic resonance imaging. Magn. Reson. Med. 35, 316–322 (1996)
A. Sotgiu, D. Gazzillo, F. Momo, ESR imaging: spatial deconvolution in the presence of an asymmetric hyperfine structure. J. Phys. C: Solid State Phys. 20, 6297 (1987)
Y. Deng, G. He, P. Kuppusamy, J.L. Zweier, Deconvolution algorithm based on automatic cutoff frequency selection for EPR imaging, Magnetic Resonance in Medicine: an Official Journal of the International Society for. Magn. Reson. Med. 50, 444–448 (2003)
H. Hirata, T. Itoh, K. Hosokawa, Y. Deng, H. Susaki, Systematic approach to cutoff frequency selection in continuous-wave electron paramagnetic resonance imaging. J. Magn. Reson. 175, 177–184 (2005)
R. Ahmad, B. Clymer, D.S. Vikram, Y. Deng, H. Hirata, J.L. Zweier, P. Kuppusamy, Enhanced resolution for EPR imaging by two-step deblurring. J. Magn. Reson. 184, 246–257 (2007)
Y. Ikebata, H. Sato-Akaba, T. Aoyama, H. Fujii, K. Itoh, H. Hirata, Resolution-recovery for EPR imaging of free radical molecules in mice, Magnetic Resonance in Medicine: an Official Journal of the International Society for. Magn. Reson. Med. 62, 788–795 (2009)
T. Yokoyama, A. Taguchi, H. Kubota, N.J. Stewart, S. Matsumoto, I.A. Kirilyuk, H. Hirata, Simultaneous T2* mapping of 14N-and 15N-labeled dicarboxy-PROXYLs using CW-EPR-based single-point imaging. J. Magn. Reson. 305, 122–130 (2019)
D.A. Komarov, A. Samouilov, R. Ahmad, J.L. Zweier, Algebraic reconstruction of 3D spatial EPR images from high numbers of noisy projections: An improved image reconstruction technique for high resolution fast scan EPR imaging. J. Magn. Reson. 319, 106812 (2020)
D.A. Komarov, H. Hirata, Fast backprojection-based reconstruction of spectral-spatial EPR images from projections with the constant sweep of a magnetic field. J. Magn. Reson. 281, 44–50 (2017)
M. Frigo, S.G. Johnson, The design and implementation of FFTW3. Proc. IEEE 93, 216–231 (2005)
A. Samouilov, D. Komarov, S. Petryakov, A. Iosilevich, J.L. Zweier, Development of an L-band resonator optimized for fast scan EPR imaging of the mouse head. Magn. Reson. Med. (2021). https://doi.org/10.1002/mrm.28821
D.A. Komarov, A. Samouilov, H. Hirata, J.L. Zweier, High fidelity triangular sweep of the magnetic field for millisecond scan EPR imaging. J. Magn. Reson. (2021). https://doi.org/10.1016/j.jmr.2021.107024
R.W. Chan, E.A. Ramsay, C.H. Cunningham, D.B. Plewes, Temporal stability of adaptive 3D radial MRI using multidimensional golden means, Magnetic Resonance in Medicine: an Official Journal of the International Society for. Magn. Reson. Med. 61, 354–363 (2009)
K.-H. Ahn, H.J. Halpern, Spatially uniform sampling in 4-D EPR spectral-spatial imaging. J. Magn. Reson. 185, 152–158 (2007)
P. Kuppusamy, P.H. Wang, J.L. Zweier, Evaluation of nitroxides for the study of myocardial metabolism and oxygenation. Magn. Reson. Chem. 33, S123–S128 (1995)
H.M. Swartz, M. Sentjurc, P.D. Morse, Cellular-metabolism of water-soluble nitroxides—effect on rate of reduction of cell nitroxide ratio, oxygen concentrations and permeability of nitroxides. Biochim. Biophys. Acta. 888, 82–90 (1986)
M.C. Emoto, H. Sato-Akaba, H. Hirata, H.G. Fujii, Dynamic changes in the distribution and time course of blood–brain barrier-permeative nitroxides in the mouse head with EPR imaging: visualization of blood flow in a mouse model of ischemia. Free. Radical. Biol. Med. 74, 222–228 (2014)
P. Kuppusamy, M. Chzhan, K. Vij, M. Shteynbuk, D.J. Lefer, E. Giannella, J.L. Zweier, Three-dimensional spectral-spatial EPR imaging of free radicals in the heart: a technique for imaging tissue metabolism and oxygenation. Proc. Natl. Acad. Sci. 91, 3388–3392 (1994)
P. Kuppusamy, M. Chzhan, J.L. Zweier, Development and optimization of 3-dimensional spatial EPR imaging for biological organs and tissues. J. Magn. Reson. Ser. B. 106, 122–130 (1995)
P. Kuppusamy, P. Wang, J.L. Zweier, Three-dimensional spatial EPR imaging of the rat heart. Magn. Reson. Med. 34, 99–105 (1995)
P. Kuppusamy, M. Chzhan, P.H. Wang, J.L. Zweier, Three-dimensional gated EPR imaging of the beating heart: time-resolved measurements of free radical distribution during the cardiac contractile cycle. Magn. Reson. Med. 35, 323–328 (1996)
G.L. He, A. Samouilov, P. Kuppusamy, J.L. Zweier, In vivo EPR imaging of the distribution and metabolism of nitroxide radicals in human skin. J. Magn. Reson. 148, 155–164 (2001)
G.L. He, Y.M. Deng, H.H. Li, P. Kuppusamy, J.L. Zweier, EPR/NMR co-imaging for anatomic registration of free-radical images. Magn. Reson. Med. 47, 571–578 (2002)
D.A. Komarov, Y. Ichikawa, K. Yamamoto, N.J. Stewart, S. Matsumoto, H. Yasui, I.A. Kirilyuk, V.V. Khramtsov, O. Inanami, H. Hirata, In vivo extracellular pH mapping of tumors using electron paramagnetic resonance. Anal. Chem. 90, 13938–13945 (2018)
N. Kocherginsky, H.M. Swartz, Nitroxide Spin Labels. Reactions in Biology and Chemistry, in, CRC Press, Boca Raton, LA, 1995
M.C. Emoto, K. Sasaki, K. Maeda, H.G. Fujii, S. Sato, Synthesis and evaluation as a blood-brain barrier-permeable probe of 7-N-(PROXYL-3-yl-methyl)theophylline. Chem. Pharm. Bull. 66, 887–891 (2018)
M.C. Emoto, M. Yamato, H. Sato-Akaba, K. Yamada, Y. Matsuoka, H.G. Fujii, Brain imaging in methamphetamine-treated mice using a nitroxide contrast agent for EPR imaging of the redox status and a gadolinium contrast agent for MRI observation of blood-brain barrier function. Free. Radic. Res. 49, 1038–1047 (2015)
H.G. Fujii, M.C. Emoto, H. Sato-Akaba, Brain redox imaging using in vivo electron paramagnetic resonance imaging and nitroxide imaging probes. Magnetochemistry 5, 11 (2019)
K.I. Matsumoto, J.B. Mitchell, M.C. Krishna, Comparative studies with EPR and MRI on the in vivo tissue redox status estimation using redox-sensitive nitroxyl probes: influence of the choice of the region of interest. Free Radic. Res. 52, 248–255 (2018)
M.J. Hoch, U. Ewert, Resolution in EPR imaging, in: EPR imaging and in vivo EPR, CRC Press, 2018, pp. 153–160
R. Ahmad, A. Samouilov, J.L. Zweier, Accelerated dynamic EPR imaging using fast acquisition and compressive recovery. J. Magn. Reson. 273, 105–112 (2016)
S. Durand, Y.-M. Frapart, M. Kerebel, Electron paramagnetic resonance image reconstruction with total variation and curvelets regularization. Inverse Probl. 33, 114002 (2017)
D.H. Johnson, R. Ahmad, G. He, A. Samouilov, J.L. Zweier, Compressed sensing of spatial electron paramagnetic resonance imaging. Magn. Reson. Med. 72, 893–901 (2014)
Z. Qiao, D. Liang, S. Tang, H. Halpern, Optimization-based image reconstruction from fast-scanned, noisy projections in EPR imaging. IEEE Access 7, 19590–19601 (2019)
Z. Qiao, G. Redler, B. Epel, Y. Qian, H. Halpern, 3D pulse EPR imaging from sparse-view projections via constrained, total variation minimization. J. Magn. Reson. 258, 49–57 (2015)
H. Kubota, D.A. Komarov, H. Yasui, S. Matsumoto, O. Inanami, I.A. Kirilyuk, V.V. Khramtsov, H. Hirata, Feasibility of in vivo three-dimensional T 2* mapping using dicarboxy-PROXYL and CW-EPR-based single-point imaging. Magn. Reson. Mater. Phys., Biol. Med. 30, 291–298 (2017)
O. Tseytlin, P. Guggilapu, A.A. Bobko, H. AlAhmad, X. Xu, B. Epel, R. O’Connell, E.H. Hoblitzell, T.D. Eubank, V.V. Khramtsov, Modular imaging system: Rapid scan EPR at 800 MHz. J. Magn. Reson. 305, 94–103 (2019)
H. Sato-Akaba, M.C. Emoto, H. Hirata, H.G. Fujii, Design and testing of a 750MHz CW-EPR digital console for small animal imaging. J. Magn. Reson. 284, 48–58 (2017)
M. Tseitlin, R.W. Quine, G.A. Rinard, S.S. Eaton, G.R. Eaton, Digital EPR with an arbitrary waveform generator and direct detection at the carrier frequency. J. Magn. Reson. 213, 119–125 (2011)
M. Gonet, M. Baranowski, T. Czechowski, M. Kucinska, A. Plewinski, P. Szczepanik, S. Jurga, M. Murias, Multiharmonic electron paramagnetic resonance imaging as an innovative approach for in vivo studies. Free Radic. Biol. Med. 152, 271–279 (2020)
M. Tseitlin, S.S. Eaton, G.R. Eaton, Reconstruction of the first-derivative EPR spectrum from multiple harmonics of the field-modulated continuous wave signal. J. Magn. Reson. 209, 277–281 (2011)
J.W. Stoner, D. Szymanski, S.S. Eaton, R.W. Quine, G.A. Rinard, G.R. Eaton, Direct-detected rapid-scan EPR at 250 MHz. J. Magn. Reson. 170, 127–135 (2004)
Acknowledgements
Authors are grateful to Dr. Kirilyuk (Novosibirsk Institute of Organic Chemistry, Novosibirsk, Russia) for providing the dMCP radical.
Funding
This work was supported by NIH grants HL135648, HL131941, and EB016096.
Author information
Authors and Affiliations
Contributions
A.S. performed experiments, analyzed data, composed and edited manuscript; D.K. performed experiments, analyzed data, composed and edited manuscript; J.L.Z. wrote manuscript and obtained funding for the work.
Corresponding author
Ethics declarations
Conflict of interest
The authors declare no conflicts of interest/competing interests.
Ethical approval
Not applicable.
Consent to participate
Not applicable.
Consent of publication
Not applicable.
Additional information
Publisher's Note
Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Rights and permissions
About this article
Cite this article
Zweier, J.L., Samouilov, A. & Komarov, D.A. Evaluation of Fast Scan EPR for High-Resolution Imaging Using Nitroxide Radical Probes at 1.2 GHz. Appl Magn Reson 53, 233–246 (2022). https://doi.org/10.1007/s00723-021-01443-x
Received:
Revised:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s00723-021-01443-x