Abstract
By using quantum mechanical DFT calculations, the most probable structures of the bambus[6]uril·Cl−, bambus[6]uril·Br−, and bambus[6]uril·I− anionic complex species were derived. In these three complexes, each of the considered univalent halide anions, included in the center of the macrocyclic cavity, is bound by 12 weak C–H⋯X− (X− = Cl−, Br−, I−) hydrogen bonds between methine hydrogen atoms on the convex face of the glycoluril units and the respective anion. The lengths of the C–H⋯X− hydrogen bonds increase in the order Cl− < Br− < I−.
Graphical abstract
Similar content being viewed by others
References
Lagona J, Mukhopadhyay P, Chakrabarti S, Isaacs L (2005) Angew Chem Int Ed 44:4844
Lee JW, Samal S, Selvapalam N, Kim HJ, Kim K (2003) Acc Chem Res 36:621
Liu S, Ruspic C, Mukhopadhyay P, Chakrabarti S, Zavalij PY, Isaacs L (2005) J Am Chem Soc 127:15959
Freeman WA, Mock WL, Shih NY (1981) J Am Chem Soc 103:7367
Mock WL, Shih NY (1983) J Org Chem 48:3618
Mock WL, Shih NY (1986) J Org Chem 51:4440
Mock WL, Shih NY (1988) J Am Chem Soc 110:4706
Mock WL, Shih NY (1989) J Am Chem Soc 111:2697
Isobe H, Tomita N, Lee JW, Kim HJ, Kim K, Nakamura E (2000) Angew Chem Int Ed 39:4257
Isobe H, Sota S, Lee JW, Kim HJ, Kim K, Nakamura E (2005) Chem Commun:1549
Tan Y, Choi S, Lee JW, Ko YH, Kim K (2002) Macromolecules 35:7161
Márquez C, Hudgins RR, Nau WM (2004) J Am Chem Soc 126:5806
Buschmann HJ, Mutihac L, Mutihac RC, Schollmeyer E (2005) Thermochim Acta 430:79
Buschmann HJ, Schollmeyer E, Mutihac L (2003) Thermochim Acta 399:203
Miyahara Y, Goto K, Oka M, Inazu T (2004) Angew Chem Int Ed 43:5019
Li Y, Li L, Zhu Y, Meng X, Wu A (2009) Cryst Growth Des 9:4255
Buschmann HJ, Zielesny A, Schollmeyer E (2006) J Incl Phenom Macrocyclic Chem 54:181
Buschmann HJ, Cleve E, Schollmeyer E (2005) Inorg Chem Commun 8:125
Svec J, Necas M, Sindelar V (2010) Angew Chem Int Ed 49:2378
Lee C, Yang W, Parr RG (1988) Phys Rev B 37:785
Becke AD (1993) J Chem Phys 98:5648
Frisch MJ, Trucks GW, Schlegel HB, Scuseria GE, Robb MA, Cheeseman JR, Montgomery Jr JA, Vreven T, Kudin KN, Burant JC, Millam JM, Iyengar SS, Tomasi J, Barone V, Mennucci B, Cossi M, Scalmani G, Rega N, Petersson GA, Nakatsuji H, Hada M, Ehara M, Toyota K, Fukuda R, Hasegawa J, Ishida M, Nakajima T, Honda Y, Kitao O, Nakai H, Klene M, Li X, Knox JE, Hratchian HP, Cross JB, Bakken V, Adamo C, Jaramillo J, Gomperts R, Stratmann RE, Yazyev O, Austin AJ, Cammi R, Pomelli C, Ochterski JW, Ayala PY, Morokuma K, Voth GA, Salvador P, Dannenberg JJ, Zakrzewski VG, Dapprich S, Daniels AD, Strain MC, Farkas O, Malick DK, Rabuck AD, Raghavachari K, Foresman JB, Ortiz JV, Cui Q, Baboul AG, Clifford S, Cioslowski J, Stefanov BB, Liu G, Liashenko A, Piskorz P, Komaromi I, Martin RL, Fox DJ, Keith T, Al-Laham MA, Peng CY, Nanayakkara A, Challacombe M, Gill PMW, Johnson B, Chen W, Wong MW, Gonzalez C, Pople JA (2004) Gaussian 03, Rev. C. 02, Gaussian, Wallingford CT
Kříž J, Dybal J, Makrlík E (2006) Biopolymers 82:536
Kříž J, Dybal J, Makrlík E, Vaňura P, Lang J (2007) Supramol Chem 19:419
Kříž J, Dybal J, Makrlík E, Vaňura P (2008) Supramol Chem 20:387
Kříž J, Dybal J, Makrlík E, Budka J, Vaňura P (2008) Supramol Chem 20:487
Kříž J, Dybal J, Makrlík E, Budka J (2008) J Phys Chem A 112:10236
Kříž J, Dybal J, Makrlík E, Budka J, Vaňura P (2009) J Phys Chem A 113:5896
Kříž J, Toman P, Makrlík E, Budka J, Shukla R, Rathore R (2010) J Phys Chem A 114:5327
Acknowledgments
This work was supported by the Czech Ministry of Education, Youth, and Sports (projects MSM 4977751303 and MSM 6046137307) and by the Czech Science Foundation (project P205/10/2280). Computer time at the MetaCentrum (project LM 2010005), and at the Institute of Physics (computer Luna/Apollo), Academy of Sciences of the Czech Republic, is gratefully acknowledged.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Toman, P., Makrlík, E. & Vaňura, P. Theoretical study on the complexation of bambus[6]uril with the chloride, bromide, and iodide anions. Monatsh Chem 142, 881–884 (2011). https://doi.org/10.1007/s00706-011-0546-y
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s00706-011-0546-y