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The complete genome sequence of a putative novel cytorhabdovirus identified in Chelidonium majus in China

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Abstract

A new cytorhabdovirus, tentatively named “chelidonium yellow mottle associated virus” (CheYMaV), was identified in Chelidonium majus with yellow mottle symptoms by high-throughput sequencing and RT-PCR. Its genome is 12,121 nucleotides in length and contains eight open reading frames (ORFs) in the order 3ʹ-N-Pʹ-P-P3-M-G-P6-L-5ʹ. Amino acid sequence comparisons between the putative proteins of CheYMaV and the corresponding proteins of other cytorhabdoviruses showed that it shares the highest sequence similarity with Trifolium pratense virus A (TpVA, MH982250) and Glehnia littoralis virus 1 (GllV1, BK014304), but with sequence identity values below the species demarcation threshold for cytorhabdoviruses (< 80%). Phylogenetic analysis showed that CheYMaV is most closely related to TpVA and GllV1. CheYMaV should therefore be considered a new member of the genus Cytorhabdovirus. This is the first report of a cytorhabdovirus identified in Chelidonium majus.

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Data availability

All data included in this study are available upon request by contact with the corresponding author.

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Acknowledgments

This work was supported by funds from the Natural Science Foundation of Liaoning Province (2021-MS-341) and the Program for Young and Middle-Aged Scientific and Technological Innovation Talents of Shenyang City (RC210161).

Funding

This work was supported by funds from the Natural Science Foundation of Liaoning Province (2021-MS-341) and the Program for Young and Middle-Aged Scientific and Technological Innovation Talents of Shenyang City (RC210161).

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Authors and Affiliations

  1. Liaoning Key Laboratory of Urban Integrated Pest Management and Ecological Security, College of Life Science and Engineering, Shenyang University, Dadong, Shenyang, 110044, Liaoning, China

    Yujie Li, Xiaoling Cui, Wenxia An, Chengyu Li & Caixia Yang

  2. National Citrus Engineering and Technology Research Center, Citrus Research Institute, Southwest University, Beibei, Chongqing, 400712, China

    Mengji Cao

  3. Guangxi Citrus Breeding and Cultivation Technology Innovation Center, Guangxi Academy of Specialty Crops, Guilin, 541004, Guangxi, China

    Song Zhang

  4. Guangxi Key Laboratory of Germplasm Innovation and Utilizationof Specialty Commercial Crops in North Guangxi, Guangxi Academy of Specialty Crops, Guilin, 541004, Guangxi, China

    Song Zhang

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  1. Yujie Li
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  2. Xiaoling Cui
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  4. Chengyu Li
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  5. Song Zhang
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  6. Mengji Cao
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Correspondence to Mengji Cao or Caixia Yang.

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Li, Y., Cui, X., An, W. et al. The complete genome sequence of a putative novel cytorhabdovirus identified in Chelidonium majus in China. Arch Virol 169, 56 (2024). https://doi.org/10.1007/s00705-024-05969-w

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