Abstract
Members of the fungal genus Hypoxylon of the family Xylariaceae are known to produce secondary metabolites with significant chemical diversity. There are more than 200 species in the genus, including the filamentous fungus Hypoxylon fendleri. To the best of our knowledge, there have been no reports of mycoviruses in H. fendleri. In this study, a novel mycovirus, designated “Hypoxylon fendleri mitovirus 1” (HfMV1), was isolated from this fungus. The genome of HfMV1 is 2850 nt in length with a G + C content of 36% and contains a large open reading frame (ORF) encoding an RNA-dependent RNA polymerase (RdRp). BLASTp analysis revealed that the RdRp domain of HfMV1 had 28.30–50.90% sequence identity to those of members of the genus Duamitovirus and had the highest identity (50.90%) to Fusarium graminearum mitovirus 2-2 (FgMV2-2). Phylogenetic analysis further indicated that HfMV1 is a member of the genus Duamitovirus of the family Mitoviridae. This is the first report of a mycovirus in H. fendleri.
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The data supporting this study's findings are available in the GenBank database.
References
Bruenn JA, Warner BE, Yerramsetty P (2015) Widespread mitovirus sequences in plant genomes. PeerJ 3:e876
Cai X, Tian F, Teng L, Liu H, Tong Y, Le S, Zhang T (2021) Cultivation of a lytic double-stranded RNA bacteriophage infecting Microvirgula aerodenitrificans reveals a mutualistic parasitic lifestyle. J Virol 95:e0039921
Dickschat JS, Wang T, Stadler M (2018) Volatiles from the xylarialean fungus Hypoxylon invadens. Beilstein J Org Chem 14:734–746
Dodds TJMAJA (1979) Isolation and analysis of double-stranded RNA from virus-infected plant and fungal tissue. Phytopathology 69:854–858
Fonseca P, Ferreira F, da Silva F, Oliveira LS, Marques JT, Goes-Neto A, Aguiar E, Gruber A (2020) Characterization of a novel mitovirus of the sand fly Lutzomyia longipalpis using genomic and virus-host interaction signatures. Viruses 13:9
Hillman BI, Cai G (2013) The family narnaviridae: simplest of RNA viruses. Adv Virus Res 86:149–176
Intaraudom C, Bunbamrung N, Dramae A, Boonyuen N, Kongsaeree P, Srichomthong K, Supothina S, Pittayakhajonwut P (2017) Terphenyl derivatives and drimane—phathalide/isoindolinones from Hypoxylon fendleri BCC32408. Phytochemistry 139:8–17
Intaraudom C, Punyain W, Bunbamrung N, Dramae A, Boonruangprapa T, Pittayakhajonwut P (2019) Antimicrobial drimane—phthalide derivatives from Hypoxylon fendleri BCC32408. Fitoterapia 138:104353
Kamauchi H, Suzuki M, Takao K, Sugita Y (2022) A benzaldehyde derivative obtained from Hypoxylon truncatum NBRC 32353 treated with hygromycin B. J Antibiot 75:1–8
Nibert ML, Vong M, Fugate KK, Debat HJ (2018) Evidence for contemporary plant mitoviruses. Virology 518:14–24
Shahi S, Eusebio-Cope A, Kondo H, Hillman BI, Suzuki N (2019) Investigation of host range of and host defense against a mitochondrially replicating mitovirus. J Virol 93:6
Tamura K, Stecher G, Kumar S (2021) MEGA11: molecular evolutionary genetics analysis version 11. Mol Biol Evol 38:3022–3027
Teng L, Li X, Cai X, Yang S, Liu H, Zhang T (2022) The complete genome sequence of a novel mycovirus in the plant-pathogenic fungus Exobasidium gracile. Arch Virol 167:1343–1347
Yu YH, Chen JY, Yi WT, Li MM, Li X, Zeng HT, Yuan T (2022) Secondary metabolites of endophyte Hypoxylon sp. HD-2014 from Uncaria rhynchophylla. China J Chin Mater Med 47:3816–3821
Zhou P, Zheng M, Li XN, Wei M, Zhang M, Li Q, Zang Y, Sun W, Wang J, Zhu H, Chen C, Zhang Y (2021) Hypoxylonoids A-G: Isopimarane diterpene glycosides from Xylaria hypoxylon. Phytochemistry 182:112613
Acknowledgements
This work was supported by the Guizhou Provincial Science and Technology Projects (Grant numbers ZK [2021]081, [2018]5779-53).
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Li, X., Ding, F., Zeng, L. et al. A novel mitovirus isolated from the filamentous fungus Hypoxylon fendleri. Arch Virol 168, 198 (2023). https://doi.org/10.1007/s00705-023-05811-9
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DOI: https://doi.org/10.1007/s00705-023-05811-9