Skip to main content
Log in

Genetic characterization and phylogenetic analysis of duck-derived waterfowl parvovirus in Anhui province, eastern China

  • Brief Report
  • Published:
Archives of Virology Aims and scope Submit manuscript

Abstract

Recently, a novel duck-origin goose parvovirus (N-GPV) was reported to cause short beak and dwarfism syndrome in ducks. In this study, we performed complete genome sequencing and analyzed three different duck-derived parvoviruses that infected different breeds of ducks. Phylogenetic trees based on gene sequences indicated that they were classical goose parvovirus (C-GPV), Muscovy duck parvovirus (MDPV), and N-GPV. Furthermore, potential recombination events were found. These results improve our understanding of the diversity of duck-derived parvoviruses in Anhui province, eastern China, and provide a reference for the prevention of associated diseases.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2

References

  1. Pénzes JJ, Söderlund-Venermo M, Canuti M, Eis-Hübinger AM, Hughes J, Cotmore SF, Harrach B (2020) Reorganizing the family Parvoviridae: a revised taxonomy independent of the canonical approach based on host association. Arch Virol 165:2133–2146

    Article  Google Scholar 

  2. Chen H, Dou Y, Tang Y, Zhang Z, Zheng X, Niu X, Yang J, Yu X, Diao Y (2015) Isolation and genomic characterization of a duck-origin GPV-related parvovirus from cherry valley ducklings in China. PLoS ONE 10:e0140284

    Article  Google Scholar 

  3. Chen H, Dou YG, Tang Y, Zheng XQ, Niu XY, Yang J, Yu XL, Diao YX (2016) Experimental reproduction of beak atrophy and dwarfism syndrome by infection in cherry valley ducklings with a novel goose parvovirus-related parvovirus. Vet Microbiol 183:16–20

    Article  Google Scholar 

  4. Chen H, Tang Y, Dou Y, Zheng X, Diao Y (2016) Evidence for vertical transmission of novel duck-origin goose parvovirus-related parvovirus. Transbound Emerg Dis 63:243–247

    Article  CAS  Google Scholar 

  5. Chen S, Wang S, Cheng X, Xiao S, Zhu X, Lin F, Wu N, Wang J, Huang M, Zheng M, Chen S, Yu F (2016) Isolation and characterization of a distinct duck-origin goose parvovirus causing an outbreak of duckling short beak and dwarfism syndrome in China. Arch Virol 161:2407–2416

    Article  CAS  Google Scholar 

  6. Glavits R, Zolnai A, Szabo E, Ivanics E, Zarka P, Mato T, Palya V (2005) Comparative pathological studies on domestic geese (Anser anser domestica) and Muscovy ducks (Cairina moschata) experimentally infected with parvovirus strains of goose and Muscovy duck origin. Acta Vet Hung 53:73–89

    Article  CAS  Google Scholar 

  7. Jansson DS, Feinstein R, Kardi V, Mato T, Palya V (2007) Epidemiologic investigation of an outbreak of goose parvovirus infection in Sweden. Avian Dis 51:609–613

    Article  Google Scholar 

  8. Ji J, Xie QM, Chen CY, Bai SW, Zou LS, Zuo KJ, Cao YC, Xue CY, Ma JY, Bi YZ (2010) Molecular detection of Muscovy duck parvovirus by loop-mediated isothermal amplification assay. Poult Sci 89:477–483

    Article  CAS  Google Scholar 

  9. Kailasan S, Agbandje-McKenna M, Parrish CR (2015) Parvovirus family conundrum: what makes a killer? Annu Rev Virol 2:425–450

    Article  CAS  Google Scholar 

  10. Kisary J (1974) Some growth characteristics of goose parvovirus strain “B.” Acta Vet Acad Sci Hung 24:329–333

    CAS  PubMed  Google Scholar 

  11. Le Gall-Recule G, Jestin V (1994) Biochemical and genomic characterization of muscovy duck parvovirus. Arch Virol 139:121–131

    Article  Google Scholar 

  12. Li P, Li J, Zhang R, Chen J, Wang W, Lan J, Xie Z, Jiang S (2018) Duck “beak atrophy and dwarfism syndrome” disease complex: Interplay of novel goose parvovirus-related virus and duck circovirus? Transbound Emerg Dis 65:345–351

    Article  CAS  Google Scholar 

  13. Li P, Lin S, Zhang R, Chen J, Sun D, Lan J, Song S, Xie Z, Jiang S (2018) Isolation and characterization of novel goose parvovirus-related virus reveal the evolution of waterfowl parvovirus. Transbound Emerg Dis 65:e284–e295

    Article  CAS  Google Scholar 

  14. Liu WJ, Yang YT, Du SM, Yi HD, Xu DN, Cao N, Jiang DL, Huang YM, Tian YB (2019) Rapid and sensitive detection of goose parvovirus and duck-origin novel goose parvovirus by recombinase polymerase amplification combined with a vertical flow visualization strip. J Virol Methods 266:34–40

    Article  CAS  Google Scholar 

  15. Palya V, Zolnai A, Benyeda Z, Kovacs E, Kardi V, Mato T (2009) Short beak and dwarfism syndrome of mule duck is caused by a distinct lineage of goose parvovirus. Avian Pathol 38:175–180

    Article  Google Scholar 

  16. Piewbang C, Jo WK, Puff C, Ludlow M, van der Vries E, Banlunara W, Rungsipipat A, Kruppa J, Jung K, Techangamsuwan S, Baumgartner W, Osterhaus A (2018) Canine bocavirus type 2 infection associated with intestinal lesions. Vet Pathol 55:434–441

    Article  Google Scholar 

  17. Poonia B, Dunn PA, Lu H, Jarosinski KW, Schat KA (2006) Isolation and molecular characterization of a new Muscovy duck parvovirus from Muscovy ducks in the USA. Avian Pathol 35:435–441

    Article  CAS  Google Scholar 

  18. Wan C, Liu R, Chen C, Cheng L, Shi S, Fu G, Chen H, Fu Q, Huang Y (2019) Novel goose parvovirus in domestic Linwu sheldrakes with short beak and dwarfism syndrome, China. Transbound Emerg Dis 66:1834–1839

    Article  CAS  Google Scholar 

  19. Shien JH, Wang YS, Chen CH, Shieh HK, Hu CC, Chang PC (2008) Identification of sequence changes in live attenuated goose parvovirus vaccine strains developed in Asia and Europe. Avian Pathol 37:499–505

    Article  CAS  Google Scholar 

  20. Wan CH, Chen CT, Cheng LF, Liu RC, Shi SH, Fu GH, Chen HM, Fu QL, Huang Y (2019) Specific detection and differentiation of classic goose parvovirus and novel goose parvovirus by TaqMan real-time PCR assay, coupled with host specificity. BMC Vet Res 15:1–8

    Article  Google Scholar 

  21. Wang J, Wang Z, Jia J, Ling J, Mi Q, Zhu G (2019) Retrospective investigation and molecular characteristics of the recombinant Muscovy duck parvovirus circulating in Muscovy duck flocks in China. Avian Pathol 48:343–351

    Article  CAS  Google Scholar 

  22. Wang S, Cheng XX, Chen SL, Xiao SF, Chen SY, Lin FQ, Wu NY, Yu FS, Zhu XL, Wang JX, Cheng YQ (2016) Identification of a novel goose parvovirus (GPV) recombinant associated with short beak and dwarfism syndrome in Mainland China, 2015. Infect Genet Evol 41:289–291

    Article  CAS  Google Scholar 

  23. Katoh K, Standley DM (2013) MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol 30(4):772–780

    Article  CAS  Google Scholar 

  24. Martin DP, Murrell B, Golden M, Khoosal A, Muhire B (2015) RDP4: detection and analysis of recombination patterns in virus genomes. Virus Evol 1(1):vev003

    Article  Google Scholar 

  25. Yang J, Chen H, Wang ZZ, Yu XL, Niu XY, Tang Y, Diao YX (2017) Development of a quantitative loop-mediated isothermal amplification assay for the rapid detection of novel goose parvovirus. Front Microbiol 8:2472

    Article  Google Scholar 

  26. Zadori Z, Stefancsik R, Rauch T, Kisary J (1995) Analysis of the complete nucleotide sequences of goose and muscovy duck parvoviruses indicates common ancestral origin with adeno-associated virus 2. Virology 212:562–573

    Article  CAS  Google Scholar 

  27. Zhang JY, Liu P, Wu YY, Wang MS, Jia RY, Zhu DK, Liu MF, Yang Q, Wu Y, Zhao XX, Zhang SQ, Liu YY, Zhang L, Yu YL, You Y, Chen S, Cheng AC (2019) Growth characteristics of the novel goose parvovirus SD15 strain in vitro. BMC Vet Res 15:1–8

    Article  Google Scholar 

Download references

Acknowledgements

We would like to thank Editage (www.editage.cn) for English language editing.

Funding

This study was supported by the Ningbo Health Branding Subject Fund (No. ppxk2018-10).

Author information

Authors and Affiliations

Authors

Contributions

All authors participated in this study. YW and JS participated in the conception of the experiments; ZD, XG, and WS performed data analysis; and YL performed the experiments. The manuscript was completed by YW and JS.

Corresponding author

Correspondence to Yongdong Li.

Ethics declarations

Conflict of interest

The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Additional information

Handling Editor: Sheela Ramamoorthy.

Publisher's Note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Supplementary Information

Below is the link to the electronic supplementary material.

Supplementary file1 (DOCX 16 KB)

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Wang, Y., Sun, J., Zhang, D. et al. Genetic characterization and phylogenetic analysis of duck-derived waterfowl parvovirus in Anhui province, eastern China. Arch Virol 166, 2011–2016 (2021). https://doi.org/10.1007/s00705-021-05110-1

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00705-021-05110-1

Navigation