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Archives of Virology

, Volume 163, Issue 8, pp 2257–2260 | Cite as

Full genotype constellations of six feline Rotavirus A strains isolated in Japan in the 1990s including a rare A15 NSP1 genotype

  • Toyoko Nakagomi
  • Chantal Ama Agbemabiese
  • Osamu Nakagomi
Annotated Sequence Record
  • 60 Downloads

Abstract

Full genome sequencing of six feline Rotavirus A (RVA) strains isolated in Japan in the 1990s revealed three genotype constellations, one of which had a unique constellation of G3-P[3]-I3-R3-C3-M3-A15-N3-T3-E3-H6. Genotype A15, carried by RVA/Cat-tc/JPN/FRV348/1994/G3P[3], is a rare NSP1 genotype, and only one human and one canine RVA strains have thus far been reported to carry this genotype. The other three G3P[3] strains (FRV72, FRV73, and FRV303) possessed a constellation of I3-R3-C2-M3-A9-N2-T3-E3-H6, whereas two G3P[9] strains (FRV317 and FRV384) possessed a constellation of I3-R3-C3-M3-A3-N3-T3-E3-H3.

Notes

Acknowledgements

The authors thank Hiroshi Masumoto for his guidance in carrying out MiSeq sequencing.

Funding

Intramural fund.

Compliance with ethical standards

Conflict of interest

None to declare.

Ethical approval

Not applicable.

Supplementary material

705_2018_3835_MOESM1_ESM.txt (113 kb)
Supplementary material 1 (TXT 113 kb)

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Copyright information

© Springer-Verlag GmbH Austria, part of Springer Nature 2018

Authors and Affiliations

  • Toyoko Nakagomi
    • 1
  • Chantal Ama Agbemabiese
    • 1
  • Osamu Nakagomi
    • 1
  1. 1.Department of Molecular Epidemiology, Graduate School of Biomedical SciencesNagasaki UniversityNagasakiJapan

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