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Archives of Virology

, Volume 163, Issue 7, pp 1989–1992 | Cite as

Complete genome sequence of a new bipartite begomovirus infecting Boehmeria leiophylla in China

  • Liling Zhao
  • Jing Zhong
  • Xiaoyun Zhang
  • Ming Ding
  • Zhongkai Zhang
Annotated Sequence Record
  • 171 Downloads

Abstract

A bipartite begomovirus was identified from a Boehmeria leiophylla plant sample exhibiting yellow mosaic symptoms collected in Nabanhe National Nature Reserve, Xishuangbanna, Yunnan, China. Five complete DNA-A and four DNA-B genome sequences were obtained by rolling-circle amplification (RCA), cloned, and sequenced. All DNA-A sequences were determined to be 2759 nucleotides in size, sharing 99.9%–100% nucleotide sequence identity with each other. The DNA-B sequences were comprised of 2673 nucleotides, sharing 98.6–100% nucleotide sequence identity with each other. Genomic organization of the begomovirus was typical of Old World bipartite begomoviruses. Sequence analysis revealed 81.84% nucleotide sequence identity to tomato leaf curl Hsinchu virus (ToLCHsV) from China for the DNA A component and 67.23% identity to the squash leaf curl China virus (SLCCNV) from India for the DNA B component. The sequence comparisons suggest that this bipartite begomovirus represents a novel species for which we propose the name “Ramie yellow mosaic virus”.

Notes

Funding

This work was supported by the National Natural Science Foundation of China (U1136606 and 31560501).

Compliance with ethical standards

The authors have read and have abided by the statement of ethical standards for manuscripts submitted to Archives of Virology.

Ethical approval

This article does not contain any studies with human participants or animals performed by any of the authors.

Conflict of interest

The authors declare that they have no conflict of interest.

Supplementary material

705_2018_3802_MOESM1_ESM.doc (42 kb)
Supplementary material 1 (DOC 42 kb)

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Copyright information

© Springer-Verlag GmbH Austria, part of Springer Nature 2018

Authors and Affiliations

  1. 1.Biotechnology and Germplasm Resources Institute, Yunnan Academy of Agricultural SciencesYunnan Key laboratory of Agricultural BiotechnologyKunmingPeople’s Republic of China

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