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Physiological traits of endornavirus-infected and endornavirus-free common bean (Phaseolus vulgaris) cv Black Turtle Soup

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Abstract

This study evaluated the physiological traits of eight lines of common bean (Phaseolus vulgaris) cv. Black Turtle Soup, four of which were double-infected with Phaseolus vulgaris endornavirus 1 and Phaseolus vulgaris endornavirus 2, and four of which were endornavirus-free. Plants from all eight lines were morphologically similar and did not show statistically significant differences in plant height, wet weight, number of days to flowering and pod formation, pods per plant, pod thickness, seed size, number of seeds per pod, and anthocyanin content. However, the endornavirus-infected lines had faster seed germination, longer radicle, lower chlorophyll content, higher carotene content, longer pods, and higher weight of 100 seeds, all of which were statistically significant. The endornaviruses were not associated with visible pathogenic effects.

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References

  1. Adams MJ, Lefkowitz EJ, King AMQ et al (2017) Changes to taxonomy and the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses. Arch Virol 162:2505–2538

    Article  CAS  Google Scholar 

  2. Akond M, Golam ASM, Khandaker L, Berthold J, Gates L, Peters K, Delong H, Hossain K (2011) Anthocyanin, total polyphenols and antioxidant activity of common bean. Am J Food Technol 6:385–394

    Article  CAS  Google Scholar 

  3. Arnon DI (1949) Copper enzymes in isolated chloroplasts, polyphenol oxidase in Beta vulgaris. Plant Physiol 2:1–15

    Article  Google Scholar 

  4. Bitocchi E, Bellucci E, Giardini A, Rau D, Rodriguez M, Biagetti E, Santilocchi R, Zeuli PS, Gioia T, Logozzo G, Attene G, Nanni L, Papa R (2013) Molecular analysis of the parallel domestication of the common bean (Phaseolus vulgaris) in Mesoamerica and the Andes. New Phytol 197:300–313

    Article  CAS  Google Scholar 

  5. Borges A, Tsai MS, Caldas DGG (2012) Validation of reference genes for RT-qPCR normalization in common bean during biotic and abiotic stresses. Plant Cell Rep 31:827–838

    Article  CAS  Google Scholar 

  6. Broughton WJ, Hernández G, Blair M, Beebe S, Gepts P, Vanderleyden J (2003) Beans (Phaseolus spp.) model food legumes. Plant Soil 252:55–128. https://doi.org/10.1023/A:1024146710611

    Article  CAS  Google Scholar 

  7. Chen S, Cao L, Huang Q, Qian Y, Zhou X (2016) The complete genome sequence of a novel maize-associated totivirus. Arch Virol 161:487–490

    Article  CAS  Google Scholar 

  8. Considine MJ, Foyer CH (2014) Redox regulation of plant development. Antioxid Redox Signal 21:1305–1326

    Article  CAS  Google Scholar 

  9. Frederickson Matika DE, Loake GJ (2014) Redox regulation in plant immune function. Antioxid Redox Signal 21:1373–1388

    Article  CAS  Google Scholar 

  10. Fukuhara T (1999) Double-stranded RNA in rice. J Plant Res 112:131–136

    Article  CAS  Google Scholar 

  11. Fukuhara T, Gibbs MJ (2012) Family Endornaviridae. In: King AMQ, Adams MJ, Carstens EB, Lefkowitz EJ (eds) Virus taxonomy: classification and nomenclature of viruses: ninth report of the International Committee on Taxonomy of Viruses. Elsevier, San Diego, pp 855–880

    Google Scholar 

  12. Grill LK, Garger SJ (1981) Identification and characterization of double-stranded RNA associated with cytoplasmic male sterility in Vicia faba. Proc Natl Acad Sci USA 78:7043–7046

    Article  CAS  Google Scholar 

  13. Khankhum S, Sela N, Osorno JM, Valverde RA (2016) RNAseq analysis of endornavirus-infected vs. endornavirus-free common bean (Phaseolus vulgaris) cultivar Black Turtle Soup. Front Microbiol 7:1905

    Article  Google Scholar 

  14. Khankhum S, Valverde RA, Pastor-Corrales M, Osorno JM, Sabanadzovic S (2015) Two endornaviruses show differential infection patterns between gene pools of Phaseolus vulgaris. Arch Virol 160:1131–1137

    Article  CAS  Google Scholar 

  15. Kirk JTO, Allen RL (1965) Dependence of chloroplast pigments synthesis on protein synthetic effects on actilione. Biochem Biophys Res J Canada 27:523–530

    Article  Google Scholar 

  16. Li L, Liu J, Xu A, Wang T, Chen J, Zhu X (2013) Molecular characterization of a trisegmented chrysovirus isolated from the radish Raphanus sativus. Virus Res 176:169–178

    Article  CAS  Google Scholar 

  17. Maguire JD (1962) Speed of germination—aid in selection and evaluation for seedling emergence and vigor. Crop Sci 2:176–177. https://doi.org/10.2135/cropsci1962.0011183x000200020033x

    Article  Google Scholar 

  18. Moriyama H, Kanaya K, Wang JZ, Nitta T, Fukuhara T (1996) Stringently and developmentally regulated levels of a cytoplasmic double-stranded RNA and its high-efficiency transmission via egg and pollen in rice. Plant Mol Biol 31:713–719

    Article  CAS  Google Scholar 

  19. Neff MM, Chory J (1998) Genetic interactions between phytochrome A, phytochrome B and cryptochrome 1 during Arabidopsis development. Plant Physiol 118:27–35

    Article  CAS  Google Scholar 

  20. Okada R, Kiyota E, Sabanadzovic S, Moriyama H, Fukuhara T, Saha P, Roossinck MJ, Severin A, Valverde RA (2011) Bell pepper endornavirus: molecular and biological properties and occurrence in the genus Capsicum. J Gen Virol 92:2664–2673

    Article  CAS  Google Scholar 

  21. Okada R, Young CK, Valverde RA, Sabanadzovic S, Aoki N, Hotate S, Kiyota E, Moriyama H, Fukuhara T (2013) Molecular characterization of two evolutionally distinct endornaviruses co-infecting common bean (Phaseolus vulgaris). J Gen Virol 94:220–229

    Article  CAS  Google Scholar 

  22. Roossinck MJ (2010) Lifestyles of plant viruses. Philos Trans R Soc Lond B Biol Sci 365:1899–1905

    Article  Google Scholar 

  23. Sabanadzovic S, Valverde RA (2011) Properties of two cryptoviruses from pepper (Capsicum annuum). Virus Genes 43:307–312

    Article  CAS  Google Scholar 

  24. Sabanadzovic S, Valverde RA, Brown JK, Martin RR, Tzanetakis IE (2009) Southern tomato virus: the link between the families Totiviridae and Partitiviridae. Virus Res 140:130–137

    Article  CAS  Google Scholar 

  25. Sabanadzovic S, Wintermantel WM, Valverde RA, McCreight JD, Aboughanem-Sabanadzovic N (2016) Cucumis melo endornavirus: Genome organization, host range and co-divergence with the host. Virus Res 214:49–58

    Article  CAS  Google Scholar 

  26. SAS Institute Inc (2010) The SAS System for Windows. Release 9.2. Statistical Analysis Systems Institute, Cary

    Google Scholar 

  27. Schwartz HF, Steadman JR, Hall R, Forster RL (2005) Compendium of bean diseases, 2nd edn. The American Phytopathological Society Press, St. Paul, p 109

    Google Scholar 

  28. Sela N, Luria N, Dombrovsky A (2012) Genome assembly of Bell pepper endornavirus from small RNA. J Virol 86:7721

    Article  CAS  Google Scholar 

  29. Stielow B, Klenk HP, Menzel W (2011) Complete genome sequence of the first endornavirus from the ascocarp of the ectomycorrhizal fungus Tuber aestivum Vittad. Arch Virol 156:343–345

    Article  CAS  Google Scholar 

  30. Urayama S, Moriyama H, Aoki N, Nakazawa Y, Okada R, Kiyota E, Miki D, Shimamoto K, Fukuhara T (2010) Knock-down of OsDCL2 in rice negatively affects maintenance of the endogenous dsRNA virus, Oryza sativa endornavirus. Plant Cell Physiol 51:58–67

    Article  CAS  Google Scholar 

  31. Valverde RA, Gutierrez DL (2007) Transmission of a dsRNA in bell pepper and evidence that it consists of the genome of an endornavirus. Virus Genes 35:399–403

    Article  CAS  Google Scholar 

  32. Zhao J, Zhang X, Hong Y, Liu Y (2016) Chloroplast in plant–virus interaction. Front Microbiol 7:1565

    PubMed  PubMed Central  Google Scholar 

Download references

Acknowledgements

The authors wish to thank Andrea Hebert, Middleton Library, Louisiana State University for editing the manuscript. This research was partially supported by funds from the National Institute of Food and Agriculture, the Ministry of Science and Technology of Thailand and the Royal Thai Government and Mahasarakham University, Thailand.

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Correspondence to R. A. Valverde.

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This study was partially funded by the National Institute of Food and Agriculture, USA, the Ministry of Science and Technology of Thailand, and the Royal Thai Government and Mahasarakham University, Thailand.

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Authors declare that they have no conflict of interest.

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This article does not contain any studies with human participants or animals performed by any of the authors.

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Handling Editor: Sead Sabanadzovic.

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Khankhum, S., Valverde, R.A. Physiological traits of endornavirus-infected and endornavirus-free common bean (Phaseolus vulgaris) cv Black Turtle Soup. Arch Virol 163, 1051–1056 (2018). https://doi.org/10.1007/s00705-018-3702-4

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  • DOI: https://doi.org/10.1007/s00705-018-3702-4

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