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Archives of Virology

, Volume 163, Issue 3, pp 791–794 | Cite as

Detection in Japan of an equine-like G3P[8] reassortant rotavirus A strain that is highly homologous to European strains across all genome segments

  • Wakako Kikuchi
  • Toyoko Nakagomi
  • Punita Gauchan
  • Chantal Ama Agbemabiese
  • Atsuko Noguchi
  • Osamu Nakagomi
  • Tsutomu Takahashi
Annotated Sequence Record

Abstract

Equine-like G3P[8] rotavirus A strains with DS-1-like backbone genes have emerged since 2013. An equine-like RVA/Human-wt/JPN/15R429/2015/G3P[8] strain possessing I2-R2-C2-M2-A2-N2-T2-E2-H2 was detected in Japan in 2015. Its VP7 gene was ≥ 99.3% identical to those of equine-like G3P[4] strains detected in Japan, and the remaining 10 genes were 98.6-99.8% identical to G1P[8] double-gene reassortants detected in Japan, Thailand and the Philippines. Thus, 15R429 was likely generated through reassortment between the equine-like G3P[4] and G1P[8] reassortant strains. Notably, 15R429 was 98.5-99.8% identical across all 11 genes of the equine-like G3P[8] strains detected in Spain and Hungary in 2015.

Notes

Acknowledgements

The authors thank S. Miura and the staff of Yuri-Kumiai General Hospital for sample collection, and Y. Baba and H. Sugawara for their technical assistance.

Compliance with ethical standards

Funding

Japan Agency for Medical Research and Development, and the intramural fund of the Department of Paediatrics, Akita University Graduate School of Medicine.

Conflict of interest

None to declare.

Ethical approval

Approved by the review boards of all relevant institutions.

Supplementary material

705_2017_3668_MOESM1_ESM.pdf (242 kb)
Supplementary material 1 (PDF 241 kb)

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Copyright information

© Springer-Verlag GmbH Austria, part of Springer Nature 2017

Authors and Affiliations

  • Wakako Kikuchi
    • 1
  • Toyoko Nakagomi
    • 2
  • Punita Gauchan
    • 2
  • Chantal Ama Agbemabiese
    • 2
  • Atsuko Noguchi
    • 1
  • Osamu Nakagomi
    • 2
  • Tsutomu Takahashi
    • 1
  1. 1.Department of PaediatricsAkita University Graduate School of MedicineAkitaJapan
  2. 2.Department of Molecular Epidemiology, Graduate School of Biomedical SciencesNagasaki UniversityNagasakiJapan

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