Skip to main content
Log in

Molecular characterization of artemisia virus A, a new sobemovirus isolated from Artemisia annua

  • Brief Report
  • Published:
Archives of Virology Aims and scope Submit manuscript

Abstract

A distinct sobemovirus was isolated from diseased Artemisia annua plants grown in experimental culture plots in Switzerland. Electron microscopy performed on extracts of leaf and root samples of a diseased A. annua plant revealed icosahedral-30 nm viral particles. The complete nucleotide sequence of the viral genome was determined. The single positive-strand RNA of 4138 nt encodes four open reading frames with an organization similar to that described for sobemoviruses. Phylogenetic analysis revealed a close relationship to ryegrass mottle virus. The virus was efficiently acquired by healthy A. annua from contaminated soil samples. “Artemisia virus A” is tentatively proposed as a name for this new candidate member of the unassigned genus Sobemovirus.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Institutional subscriptions

Fig. 1
Fig. 2

References

  1. Altschul S, Gish W, Miller W, Myers E, Lipman D (1990) Basic local alignment search tool. J Mol Biol 215:403–410

    PubMed  CAS  Google Scholar 

  2. Anonymous (2006) WHO monograph on good agricultural and collection practices (GACP) for Artemisia annua L. http://www.who.int/medicines/publications

  3. Arthur K, Dogra S, Randles JW (2010) Complete nucleotide sequence of Velvet tobacco mottle virus isolate K1. Arch Virol 155:1893–1896

    Article  PubMed  CAS  Google Scholar 

  4. Delabays N, Simonnet X, Gaudin M (2001) The genetics of artemisinin content in Artemisia annua L. and the breeding of high yielding cultivars. Curr Med Chem 8:1795–1801

    Article  PubMed  CAS  Google Scholar 

  5. Frohman MA, Dush MK, Martin GR (1988) Rapid production of full-length cDNAs from rare transcripts: amplification using a single gene specific oligonucleotide primer. Proc Natl Acad Sci USA 85:8998–9002

    Article  PubMed  CAS  Google Scholar 

  6. Froussard P (1992) A random-PCR method (rPCR) to construct whole DNA library from low amount or RNA. Nucleic Acids Res 20:2900

    Article  PubMed  CAS  Google Scholar 

  7. Kumar S, Dudley J, Nei M, Tamura K (2008) MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences. Brief Bioinform 9:299–306

    Article  PubMed  CAS  Google Scholar 

  8. Lewison G, Srivastava D (2008) Malaria research 1980–2004 and the burden of disease. Acta Trop 106:96–103

    Article  PubMed  Google Scholar 

  9. Màkinen K, Taam T, Naess V, Truve E, Puurand Ü, Munthe T, Saarma M (1995) Characterization of cocksfoot mottle sobemovirus genomic RNA and sequence comparison with related viruses. J Gen Virol 76:2817–2825

    Article  PubMed  Google Scholar 

  10. McGavin WJ, MacFarlane SA (2009) Rubus chlorotic mottle virus, a new sobemovirus infection raspberry and bramble. Virus Res 139:10–13

    Article  PubMed  CAS  Google Scholar 

  11. Ravindranathan T (1994) Artemisinin. Curr Sci 66:35

    CAS  Google Scholar 

  12. Rice P, Longden I, Bleasby A (2000) EMBOSS: the European Molecular Biology Open Software Suite. Trends Genet 16:276–277

    Article  PubMed  CAS  Google Scholar 

  13. Satheshkumar PS, Lokesh GL, Murthy MRN, Savithri HS (2005) The role of Arginine-rich motif and β-annulus in the assembly and stability of Sesbania mosaic virus capsids. J Mol Biol 353:447–458

    Article  PubMed  CAS  Google Scholar 

  14. Ssekiwoko F, Mulumba JW, Carter BA, Stanford H, Parkinson N, Kelly P, Smith JJ (2009) Xanthomonas hortorum pathogenic on Artemisia annua newly reported in Uganda. Plant Pathol 58(4):795

    Article  Google Scholar 

  15. Steere RL (1956) Purification and properties of tobacco ringspot virus. Phytopathology 46:60–69

    CAS  Google Scholar 

  16. Stothard P (2000) The sequence manipulation suite: Javascript programs for analyzing and formatting protein and DNA sequences. Biotechniques 28:1102–1104

    PubMed  CAS  Google Scholar 

  17. Taam T, Truve E (2000) Sobemoviruses. J Virol 74:6231–6241

    Article  Google Scholar 

  18. Truve E, Fargette D (2011) Genus Sobemovirus. In: King AMQ, Adams MJ, Carstens EB, Lefkowitz E (eds) Virus Taxonomy, ninth Report of the International Committee on Taxonomy of Viruses. Elsevier Academics Press, London, pp 1185–1189

    Google Scholar 

  19. Vikas Dhingra K, Vishweshwar R, Lakshmi Narasu M (1999) Current status of artemisinin and its derivatives as antimalarial drugs. Life Sci 66:279–300

    Article  Google Scholar 

Download references

Acknowledgment

The technical assistance of N. Dubuis, J. Brodard, and P.-H. Crausaz is gratefully acknowledged. We kindly acknowledge Dr. P. Vinciguerra for critical reading of the manuscript.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Carole Balmelli.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Ramel, ME., Gugerli, P., Besse, S. et al. Molecular characterization of artemisia virus A, a new sobemovirus isolated from Artemisia annua . Arch Virol 158, 463–466 (2013). https://doi.org/10.1007/s00705-012-1507-4

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00705-012-1507-4

Keywords

Navigation