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Characterization of a member of a new Potyvirus species infecting arracacha in Brazil

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Abstract

An arracacha (Arracacia xanthorrhiza) plant collected in Brazil was found to be infected by a new virus. This viral isolate (named C17) systemically infected Nicotiana benthamiana and Apium graveolens. A polyclonal antibody was raised, and analysis of our arracacha germplasm collection showed a high infection rate of C17-like viruses (93% infection). Sequencing of the ca. 1.7 kb 3′-terminal genomic region revealed a typical potyvirus genome organization. It shared less than 70% nucleotide identity with any other potyvirus sequence, which thus indicated that it is possibly a member of a new Potyvirus species tentatively named Arracacha mottle virus (AMoV).

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References

  1. Adams MJ, Antoniw JF, Beaudoin F (2005) Overview and analysis of the polyprotein cleavage sites in the family Potyviridae. Mol Plant Pathol 6:471–487

    Article  CAS  Google Scholar 

  2. Adams MJ, Antoniw JF, Fauquet CM (2005) Molecular criteria for genus and species discrimination within the family Potyviridae. Arch Virol 150:459–479

    Article  PubMed  CAS  Google Scholar 

  3. Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25(17):3389–3402

    Article  PubMed  CAS  Google Scholar 

  4. Atreya PL, Atreya CD, Pirone TP (1991) Aminoacid substitutions in the coat protein result in loss of insect transmissibility of a plant virus. Proc Natl Acad Sci 88:7887–7891

    Article  PubMed  CAS  Google Scholar 

  5. Blanc S, Lopez-Moya JJ, Wang R, Garcia-Lampasona S, Thornbury DW, Pirone TP (1997) A specific interaction between coat protein and helper component correlates with aphid transmission of a potyvirus. Virology 231:141–147

    Article  PubMed  CAS  Google Scholar 

  6. Bukasov SM (1981) Las plantas cultivadas de México, Guatemala y Colombia. CATIE, Turricalba, Costa Rica

    Google Scholar 

  7. Chen J, Chen J, Adams MJ (2001) A universal PCR primer to detect members of the Potyviridae and its use to examine the taxonomic status of several members of the family. Arch Virol 146:757–766

    Article  PubMed  CAS  Google Scholar 

  8. Clark MF, Adams AN (1977) Characteristics of the microplate method of enzyme-linked immunosorbent assay for the detection of plant viruses. J Gen Virol 34:475–483

    Article  PubMed  CAS  Google Scholar 

  9. Dusi AN, Carvalho MG, Zambolim EM (1988) Purificaçao simples e com alto rendimento do vírus do mosaico comum do feijoeiro. Fitopatol Bras 13(3):274–275

    Google Scholar 

  10. Fajardo TVM, Torres AC, Buso JA, Ávila AC, Resende RO (2002) Produção e qualidade de bulbos de alho livre de suas principais viroses. Summa Phytopathologica 28(2):207–210

    Google Scholar 

  11. Gal-On A, Antignus Y, Rosner A, Raccah B (1992) A zucchini yellow mosaic virus coat protein gene mutation restores aphid transmissibility but so effect on multiplication. J Gen Virol 73:2183–2187

    Article  PubMed  CAS  Google Scholar 

  12. Hampton R, Ball E, De Bôer S (1990) Serological methods for detection and identification of viral and bacterial plant pathogens—a laboratory manual. APS Press, Saint Paul

    Google Scholar 

  13. Hermann M (1997) Arracacha (Arracacia xanthorrhiza Bancroft). In: Hermann M, Heller J (eds) Andean roots and tubers: ahipa, arracacha, maca and yacon. Promoting the conservation and use of underutilized and neglected crops. 21. Institute of Plant Genetics and Crop Plant Research, Gatersleben/International Plant Genetic Resources Institute, Rome, Italy, pp 75–172

  14. Jones RAC, Kenten RH (1978) Arracacha virus A, a newly recognized virus infecting arracacha (Arracacia xanthorriza, Umbelliferae) in Peruvian Andes. Ann Appl Biol 90(1):85–91

    Article  Google Scholar 

  15. Kenten RH, Jones RAC (1979) Arracacha virus B: a second isometric virus infecting arracacha (Arracacia xanthorrhiza, Umbelliferae) in Peruvian Andes. Ann Appl Biol 93(1):31–36

    Article  Google Scholar 

  16. Kumar S, Tamura K, Nei M (2004) MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5:150–163

    Article  PubMed  CAS  Google Scholar 

  17. Laemmli UK (1970) Cleavage of structure proteins during the assembly of the head of bacteriophago T4. Nature 227:680–685

    Article  PubMed  CAS  Google Scholar 

  18. Lizárraga C (2000) Virus en raices andinas. In: SEMINARIO, J comp. Raices andinas: manual de capacitacion. Lima: CIP

  19. Lizárraga C, Chuquillanqui G, Jayasinghe U (1994) Un variante del virus del anillo necrotico de la papa (Potato black ringspot virus, PBRV) aislado de arracacha (Arracacia xanthorrhiza). Fitopatología 29(1):144–149

    Google Scholar 

  20. Madeira NR, Teixeira JBT, Arimura CT, Junqueira CS (2005) Influence of BAP and GA3 concentration on the in vitro developement of arracacha. Horticu Bras 23:982–985

    Google Scholar 

  21. Mowat WP, Duncan GH, Dawson S (1988) Narcissus late season yellows potyvirus; symptoms, properties and serological detection. Ann Appl Biol 113:531–544

    Article  Google Scholar 

  22. Pozzer L, Dusi AN, Silva JB (1992) Estudo da degenerescência da batata-doce (Ipomea batatas). Horticultura Brasileira 17(20):187

    Google Scholar 

  23. Shukla DD, Ward CW, Brunt AA (1994) The potyviridae. CAB International, Wallingford

    Google Scholar 

  24. Staden R, Judge DP, Bonfield JK (2003) Managing sequencing projects in the GAP4 enviroment. In: Krawetz SA, Womble DD (eds) Introduction to bioinformatics. A theoretical and practical approach. Human Press Inc, Totawa

    Google Scholar 

  25. Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Molecular biology and evolution 24:1596–1599

    Article  PubMed  CAS  Google Scholar 

  26. Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22(22):4673–4680

    Article  PubMed  CAS  Google Scholar 

  27. Voller A, Bidwell DE (1977) Enzyme immunoassays and their potential in diagnostic virology. In: Kurstak E, Kurstak C (eds) Comparative diagnosis of viral diseases, vol II. Academic Press, New York, pp 449–457

    Google Scholar 

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Acknowledgments

We are indebted to Élcio Vieira da Silva Lopes (in memorian), who assisted us with cloning of the 3′ genomic fragment, and Bergmann Morais Ribeiro and Guy de Capedevile for assistance in electron microscopy.

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Correspondence to Alice Kazuko Inoue-Nagata.

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Orílio, A.F., Dusi, A.N., Madeira, N.R. et al. Characterization of a member of a new Potyvirus species infecting arracacha in Brazil. Arch Virol 154, 181–185 (2009). https://doi.org/10.1007/s00705-008-0289-1

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  • DOI: https://doi.org/10.1007/s00705-008-0289-1

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