Summary
The complete genome of O/Akesu/58 strain of foot-and-mouth disease virus (FMDV) was sequenced. The phylogenetic analysis revealed that it is not closely related to epidemic strains or previous strains compared with reference sequences (the identities of complete VP1 nucleotide sequences range from 77.5 to 84.0%). Its cell-receptor-binding site is a SGD (Ser-Gly-Asp) motif instead of RGD (Arg-Gly-Asp), and 43 bases were deleted in PKs region of the 5′UTR, although deletions were not found in other gene regions.
References
VI Agol AV Paul E Wimmer (1999) ArticleTitleParadoxes of the replication of picornaviral genomes Virus Res 62 129–147 Occurrence Handle10507323 Occurrence Handle10.1016/S0168-1702(99)00037-4 Occurrence Handle1:CAS:528:DyaK1MXltlCrsbc%3D
GJ Belsham (1993) ArticleTitleDistinctive features of foot-and-mouth disease virus, a member of the picornavirus family: aspects of virus protein synthesis, protein processing and structure Prog Biophys Mol Biol 60 241–260 Occurrence Handle8396787 Occurrence Handle10.1016/0079-6107(93)90016-D Occurrence Handle1:CAS:528:DyaK3sXlslOhsro%3D
C Carrillo ER Tulman G Delhon Z Lu A Carreno A Vagnozzi GF Kutish DL Rock (2005) ArticleTitleComparative genomics of foot-and-mouth disease virus J Virol 79 6487–6504 Occurrence Handle15858032 Occurrence Handle10.1128/JVI.79.10.6487-6504.2005 Occurrence Handle1:CAS:528:DC%2BD2MXkt1Whsr4%3D
AR Carrol SD Rowlland BE Clerke (1984) ArticleTitleThe complete nucleotide sequences of the RNA coding for the primary translation product of foot-and-mouth-disease virus Nucleic Acids Res 12 2461–2472 Occurrence Handle10.1093/nar/12.5.2461
M Donnelly L Hughes G Luke H Mendoza E ten Dam D Gani M Ryan (2001) ArticleTitleThe “cleavage” activities of foot-and-mouth disease virus 2A site-directed mutants and naturally occurring “2A-like” sequences J Gen Virol 82 1027–1041 Occurrence Handle11297677 Occurrence Handle1:CAS:528:DC%2BD3MXjtFOisLk%3D
CS Dunn AI Donaldson (1997) ArticleTitleNatural adaption to pigs of a Taiwanese isolate of foot-and-mouth disease virus Vet Rec 141 174–175 Occurrence Handle9290197 Occurrence Handle1:STN:280:ByiH3srks1I%3D
M Falk F Sobrino E Beck (1992) ArticleTitleVPg gene amplification correlates with infective particle formation in foot-and-mouth disease virus J Virol 66 2251–2260 Occurrence Handle1312630 Occurrence Handle1:CAS:528:DyaK38XhvFSktb8%3D
AT Giraudo E Beck K Strebel PA De Mello JL La Torre EA Scodeller IE Bergmann (1990) ArticleTitleIdentification of a nucleotide deletion in parts of polypeptide 3A in two independent attenuated aphthovirus strains Virology 177 780–783 Occurrence Handle2164734 Occurrence Handle10.1016/0042-6822(90)90549-7 Occurrence Handle1:CAS:528:DyaK3cXltFaisLw%3D
NJ Knowles AR Samuel PR Davies RP Kitching AI Donaldson (2001) ArticleTitleOutbreak of foot-and-mouth disease virus serotype O in the UK caused by a pandemic strain Vet Rec 148 258–259 Occurrence Handle11292084 Occurrence Handle1:STN:280:DC%2BD3Mzitl2gsQ%3D%3D
PW Mason JM Pacheco QZ Zhao NJ Knowles (2003) ArticleTitleComparisons of the complete genomes of Asian, African and European isolates of a recent foot-and-mouth disease virus type O pandemic strain (PanAsia) J Gen Virol 84 1583–1593 Occurrence Handle12771429 Occurrence Handle10.1099/vir.0.18669-0 Occurrence Handle1:CAS:528:DC%2BD3sXks1Gmtbw%3D
PW Mason E Rieder B Baxt (1994) ArticleTitleRGD sequence of foot-and-mouth disease virus is essential for infecting cells via the natural receptor but can be bypassed by an antibody-dependent enhancement pathway Proc Natl Acad Sci USA 91 1932–1936 Occurrence Handle8127909 Occurrence Handle10.1073/pnas.91.5.1932 Occurrence Handle1:CAS:528:DyaK2cXjtF2isL0%3D
TS McKenna J Lubroth E Rieder B Baxt PW Mason (1995) ArticleTitleReceptor-binding site-deleted foot-and-mouth disease (FMD) virus protects cattle from FMD J Virol 69 5787–5790 Occurrence Handle7637023 Occurrence Handle1:CAS:528:DyaK2MXns1Khsrc%3D
E Rieder T Henry H Duque B Baxt (2005) ArticleTitleAnalysis of a foot-and-mouth disease virus type A24 isolate containing an SGD receptor recognition site in vitro and its pathogenesis in cattle J Virol 79 12989–12998 Occurrence Handle16189001 Occurrence Handle10.1128/JVI.79.20.12989-12998.2005 Occurrence Handle1:CAS:528:DC%2BD2MXhtFWisbvM
AR Samuel NJ Knowles (2001) ArticleTitleFoot-and-mouth disease type O viruses exhibit genetically and geographically distinct evolutionary lineages (topotypes) J Gen Virol 62 609–621
R Tellier J Bukh SU Emerson RH Purcell (1996) ArticleTitleAmplification of the full-length hepatitis A virus genome by long reverse transcription-PCR and transcription of infectious RNA directly from the amplicon Proc Natl Acad Sci USA 93 4370–4373 Occurrence Handle8633073 Occurrence Handle10.1073/pnas.93.9.4370 Occurrence Handle1:CAS:528:DyaK28XivVKqt78%3D
PC Yang RM Chu WB Chung HT Sung (1999) ArticleTitleEpidemiological characteristics and financial costs of the 1997 foot-and-mouth disease epidemic in Taiwan Vet Rec 145 731–734 Occurrence Handle10972111 Occurrence Handle1:STN:280:DC%2BD3cvktFSnsA%3D%3D
Author information
Authors and Affiliations
Additional information
The first two authors contributed equally to this work.
Rights and permissions
About this article
Cite this article
Li, D., Liu, ZX., Bao, HF. et al. The complete genome sequence of foot-and-mouth disease virus O/Akesu/58 strain and its some molecular characteristics. Arch Virol 152, 2079–2085 (2007). https://doi.org/10.1007/s00705-007-1041-y
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s00705-007-1041-y