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Complete nucleotide sequence of a Japanese isolate of Chrysanthemum virus B (genus Carlavirus)

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Summary

The complete nucleotide sequence of a Chrysanthemum virus B isolate from Japan (CVB-S) has been determined. The genomic RNA of CVB-S is 8,990 nucleotides long, excluding the poly(A) tail and, like that of other carlaviruses, contains six open reading frames (ORFs). Multiple alignment and phylogenetic analyses indicated that the phylogenetic relationship among members of the genus Carlavirus is very diverse, with phlox virus S being the closest relative of CVB. In aphid transmission tests, CVB-S was transmitted at a very low rate by Aphis gossypii, a new vector of the virus.

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References

  • Adams MJ, Accotto GP, Agranovsky AA, Bar-Joseph M, Boscia D, Brunt AA, Candresse T, Coutts RHA, Dolja VV, Falk BW, Foster GD, Gonsalves D, Jelkmann W, Karasev A, Martelli GP, Mawassi M, Milne RG, Minafra A, Namba S, Rowhani A, Vetten HJ, Vishnichenko VK, Wisler GC, Yoshikawa N, Zavriev SK (2005) Family Flexiviridae. In: Fauquet CM, Mayo MA, Maniloff J, Desselberger U, Ball LA (eds) Virus taxonomy: classification and nomenclature of viruses; Eighth Report of the International Committee on Taxonomy of Viruses, Academic Press, San Diego, pp 1089–1124

  • MJ Adams JF Antoniw M Bar-Joseph AA Brunt T Candresse GD Foster GP Martelli RG Milne SK Zavriev CM Fauquet (2004) ArticleTitleThe new plant virus family Flexiviridae and assessment of molecular criteria for species demarcation Arch Virol 149 1045–1060 Occurrence Handle15098118 Occurrence Handle1:CAS:528:DC%2BD2cXjt1Sgtr4%3D

    PubMed  CAS  Google Scholar 

  • V Aritua E Barg E Adipala HJ Vetten (2007) ArticleTitleSequence analysis of the entire RNA genome of a sweet potato chlorotic fleck virus isolate reveals that it belongs to a distinct carlavirus species Arch Virol 152 813–818 Occurrence Handle17187295 Occurrence Handle10.1007/s00705-006-0891-z Occurrence Handle1:CAS:528:DC%2BD2sXjt1Krur0%3D

    Article  PubMed  CAS  Google Scholar 

  • Blackman RL, Eastop VF (1984) Aphids on the world’s crops: An identification guide, 226 pp

  • TD Cavileer BT Halpern DM Lawrence EV Podleckis RR Martin BL Hillman (1994) ArticleTitleNucleotide sequence of the carlavirus associated with blueberry scorch and similar diseases J Gen Virol 75 711–720 Occurrence Handle8151289 Occurrence Handle1:CAS:528:DyaK2cXkt1yhs74%3D Occurrence Handle10.1099/0022-1317-75-4-711

    Article  PubMed  CAS  Google Scholar 

  • J Chen J Chen MJ Adams (2001) ArticleTitleMolecular characterisation of a complex mixture of viruses in garlic with mosaic symptoms in China Arch Virol 146 1841–1853 Occurrence Handle11722009 Occurrence Handle10.1007/s007050170037 Occurrence Handle1:CAS:528:DC%2BD3MXovVOnsr4%3D

    Article  PubMed  CAS  Google Scholar 

  • J Chen YH Shi YW Lu MJ Adams JP Chen (2006) ArticleTitleNarcissus symptomless virus: a new carlavirus of daffodils Arch Virol 151 2261–2267 Occurrence Handle16763730 Occurrence Handle10.1007/s00705-006-0801-4 Occurrence Handle1:CAS:528:DC%2BD28XhtFSnsL3O

    Article  PubMed  CAS  Google Scholar 

  • SA Choi KH Ryu (2003) ArticleTitleThe complete nucleotide sequence of the genome RNA of Lily symptomless virus and its comparison with that of other carlaviruses Arch Virol 148 1943–1955 Occurrence Handle14551817 Occurrence Handle10.1007/s00705-003-0155-0 Occurrence Handle1:CAS:528:DC%2BD3sXnvFalt7k%3D

    Article  PubMed  CAS  Google Scholar 

  • S Fuji H Yamamoto M Inoue K Yamashita Y Fukui H Furuya H Naito (2002) ArticleTitleComplete nucleotide sequence of the genomic RNA of Aconitum latent virus (genus Carlavirus) isolated from Delphinium sp Arch Virol 147 865–870 Occurrence Handle12038696 Occurrence Handle10.1007/s007050200034 Occurrence Handle1:CAS:528:DC%2BD38XktVGiurY%3D

    Article  PubMed  CAS  Google Scholar 

  • A Gramstat A Courtpozanis W Rohde (1990) ArticleTitleThe 12 kDa protein of potato virus M displays properties of a nucleic acid-binding regulatory protein FEBS Lett 276 34–38 Occurrence Handle2265707 Occurrence Handle10.1016/0014-5793(90)80500-I Occurrence Handle1:CAS:528:DyaK3MXkt1Cms7g%3D

    Article  PubMed  CAS  Google Scholar 

  • T Hataya K Uchino R Arimoto N Suda T Sano E Shikata I Uyeda (2000) ArticleTitleMolecular characterization of Hop latent virus and phylogenetic relationships among viruses closely related to carlaviruses Arch Virol 145 2503–2524 Occurrence Handle11205102 Occurrence Handle10.1007/s007050070005 Occurrence Handle1:CAS:528:DC%2BD3MXhtFCjsLc%3D

    Article  PubMed  CAS  Google Scholar 

  • M Hollings (1957) ArticleTitleInvestigation of chrysanthemum viruses II. Virus B (mild mosaic) and chrysanthemum latent virus Ann Appl Biol 45 589–602

    Google Scholar 

  • Hollings M, Stone OM (1972) Chrysanthemum virus B. Descriptions of Plant Viruses No. 110

  • HJ Ju TD Samuels YS Wang E Blancaflor M Payton R Mitra K Krishnamurthy RS Nelson J Verchot-Lubicz (2005) ArticleTitleThe Potato virus X TGBp2 movement protein associates with endoplasmic reticulum-derived vesicles during virus infection Plant Physiol 138 1877–1895 Occurrence Handle16055678 Occurrence Handle10.1104/pp.105.066019 Occurrence Handle1:CAS:528:DC%2BD2MXps12lsr0%3D

    Article  PubMed  CAS  Google Scholar 

  • DM Lawrence MN Rozanov BI Hillman (1995) ArticleTitleAutocatalytic processing of the 223-kDa protein of blueberry scorch carlavirus by a papain-like proteinase Virology 207 127–135 Occurrence Handle7871721 Occurrence Handle10.1006/viro.1995.1058 Occurrence Handle1:CAS:528:DyaK2MXjslCmtr0%3D

    Article  PubMed  CAS  Google Scholar 

  • BY Lee BE Min JH Ha MY Lee KH Paek KH Ryu (2006) ArticleTitleGenome structure and complete sequence of genomic RNA of Daphne virus S Arch Virol 151 193–200 Occurrence Handle16096707 Occurrence Handle10.1007/s00705-005-0606-x Occurrence Handle1:CAS:528:DC%2BD2MXhtlWrsLzI

    Article  PubMed  CAS  Google Scholar 

  • K Levay S Zavriev (1991) ArticleTitleNucleotide sequence and gene organization of the 3′-terminal region of chrysanthemum virus B genomic RNA J Gen Virol 72 2333–2337 Occurrence Handle1919520

    PubMed  Google Scholar 

  • NI Lukhovitskaya AG Solovyev TE Koshkina SK Zavriev SY Morozov (2005) ArticleTitleInteraction of the carlavirus cysteine-rich protein with the plant defense system Mol Biol 39 785–791 Occurrence Handle10.1007/s11008-005-0094-9 Occurrence Handle1:CAS:528:DC%2BD2MXht1aitb%2FI

    Article  CAS  Google Scholar 

  • J Matousek J Schubert J Ptacek P Kozlova P Dedic (2005) ArticleTitleComplete nucleotide sequence and molecular probing of potato virus S genome Acta Virol 49 195–205 Occurrence Handle16178517 Occurrence Handle1:CAS:528:DC%2BD2MXhtVemt7%2FO

    PubMed  CAS  Google Scholar 

  • SY Morozov AG Solovyev (2003) ArticleTitleTriple gene block: modular design of a multifunctional machine for plant virus movement J Gen Virol 84 1351–1366 Occurrence Handle12771402 Occurrence Handle10.1099/vir.0.18922-0 Occurrence Handle1:CAS:528:DC%2BD3sXks1Gmtrs%3D

    Article  PubMed  CAS  Google Scholar 

  • RD Page (1996) ArticleTitleTreeView: an application to display phylogenetic trees on personal computers Comput Appl Biosci 12 357–358 Occurrence Handle8902363 Occurrence Handle1:STN:280:ByiD2MfgtlA%3D

    PubMed  CAS  Google Scholar 

  • MV Schepetilnikov U Manske AG Solovyev AA Zamyatnin SuffixJr J Schiemann SY Morozov (2005) ArticleTitleThe hydrophobic segment of Potato virus X TGBp3 is a major determinant of the protein intracellular trafficking J Gen Virol 86 2379–2391 Occurrence Handle16033986 Occurrence Handle10.1099/vir.0.80865-0 Occurrence Handle1:CAS:528:DC%2BD2MXpvVCgtbs%3D

    Article  PubMed  CAS  Google Scholar 

  • CM Smith MM Campbell (2004) ArticleTitleComplete nucleotide sequence of the genomic RNA of Poplar mosaic virus (Genus Carlavirus) Arch Virol 149 1831–1841 Occurrence Handle15593423 Occurrence Handle10.1007/s00705-004-0348-2 Occurrence Handle1:CAS:528:DC%2BD2cXnt1Gkur4%3D

    Article  PubMed  CAS  Google Scholar 

  • S Spiegel M Zeidan I Sobolev Y Beckelman V Holdengreber Y Tam MB Joseph Z Lipsker A Gera (2007) ArticleTitleThe complete nucleotide sequence of Passiflora latent virus and its phylogenetic relationship to other carlaviruses Arch Virol 152 181–189 Occurrence Handle16932981 Occurrence Handle10.1007/s00705-006-0833-9 Occurrence Handle1:CAS:528:DC%2BD28XhtlCjt73J

    Article  PubMed  CAS  Google Scholar 

  • J Verchot-Lubicz (2005) ArticleTitleA new cell-to-cell transport model for potexviruses Mol Plant Microbe Interact 18 283–290 Occurrence Handle15828680 Occurrence Handle10.1094/MPMI-18-0283 Occurrence Handle1:CAS:528:DC%2BD2MXis1Ghs78%3D

    Article  PubMed  CAS  Google Scholar 

  • N Verma A Sharma R Ram V Hallan AA Zaidi ID Garg (2003) ArticleTitleDetection, identification and incidence of Chrysanthemum B carlavirus in chrysanthemum in India Crop Prot 22 425–429 Occurrence Handle10.1016/S0261-2194(02)00184-9

    Article  Google Scholar 

  • SK Zavriev KV Kanyuka KE Levay (1991) ArticleTitleThe genome organization of potato virus M RNA J Gen Virol 72 9–14 Occurrence Handle1990070 Occurrence Handle1:CAS:528:DyaK3MXks1Glsro%3D

    PubMed  CAS  Google Scholar 

  • HY Zheng J Chen MJ Adams JP Chen (2006) ArticleTitleComplete nucleotide sequence and affinities of the genomic RNA of Narcissus common latent virus (genus Carlavirus) Arch Virol 151 1667–1672 Occurrence Handle16489505 Occurrence Handle10.1007/s00705-006-0727-x Occurrence Handle1:CAS:528:DC%2BD28XntVCqu74%3D

    Article  PubMed  CAS  Google Scholar 

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Ohkawa, A., Yamada, M., Sayama, H. et al. Complete nucleotide sequence of a Japanese isolate of Chrysanthemum virus B (genus Carlavirus). Arch Virol 152, 2253–2258 (2007). https://doi.org/10.1007/s00705-007-1039-5

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