Abstract
Intrachromosomal asymmetry, one of the two aspects of karyotype asymmetry, increases because of shifts of the centromere position from the median/submedian to terminal or subterminal. Conventional measures of asymmetry use comparisons with the most symmetrical karyotype and thus are an absolute measure of variation in the centromeric index. Conversely, the CVCI index, the coefficient of variation for the centromeric index, only evaluates the relative variation in the centromeric index. We performed a detailed analysis of the capability of the CVCI index and conventional measures of karyotype asymmetry to accurately characterize differences in intrachromosomal asymmetry. Our results show that the CVCI index is unable to accurately evaluate intrachromosomal asymmetry. In fact, the CVCI index evaluates a different measure than other conventional measures of karyotype asymmetry. Therefore, to avoid confusion, we propose that the variation evaluated by the CVCI index should be named heterogeneity of the centromeric index.
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Acknowledgments
We express our sincere thanks to Dr. Jodi Brandt for her invaluable comments on a previous version of the manuscript, and to Dr. Julian Ash and Mr. Bob Forrester for their helpful discussion. This work was supported by the National Natural Science Foundation of China (grant no. 30900078) and Guangdong Natural Science Foundation (grant no. 9151009001000046).
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Zuo, L., Yuan, Q. The difference between the heterogeneity of the centromeric index and intrachromosomal asymmetry. Plant Syst Evol 297, 141 (2011). https://doi.org/10.1007/s00606-011-0528-x
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DOI: https://doi.org/10.1007/s00606-011-0528-x