Abstract
SLC10A7, encoded by the so-called SLC10A7 gene, is the seventh member of a human sodium/bile acid cotransporter family, known as the SLC10 family. Despite similarities with the other members of the SLC10 family, SLC10A7 does not exhibit any transport activity for the typical SLC10 substrates and is then considered yet as an orphan carrier. Recently, SLC10A7 mutations have been identified as responsible for a new Congenital Disorder of Glycosylation (CDG). CDG are a family of rare and inherited metabolic disorders, where glycosylation abnormalities lead to multisystemic defects. SLC10A7-CDG patients presented skeletal dysplasia with multiple large joint dislocations, short stature and amelogenesis imperfecta likely mediated by glycosaminoglycan (GAG) defects. Although it has been demonstrated that the transporter and substrate specificities of SLC10A7, if any, differ from those of the main members of the protein family, SLC10A7 seems to play a role in Ca2+ regulation and is involved in proper glycosaminoglycan biosynthesis, especially heparan-sulfate, and N-glycosylation. This paper will review our current knowledge on the known and predicted structural and functional properties of this fascinating protein, and its link with the glycosylation process.
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Abbreviations
- CDG:
-
Congenital Disorders of Glycosylation
- GAG:
-
Glycosaminoglycans
References
Abe T, Kanemitu Y, Nakasone M et al (2013) SLC10A4 is a protease-activated transporter that transports bile acids. J Biochem 154:93–101. https://doi.org/10.1093/jb/mvt031
Alcalay M, Toniolo D (1988) CpG islands of the X chromosome are gene associated. Nucleic Acids Res 16:9527–9543. https://doi.org/10.1093/nar/16.20.9527
Ashikov A, Abu Bakar N, Wen X-Y et al (2018) Integrating glycomics and genomics uncovers SLC10A7 as essential factor for bone mineralization by regulating post-Golgi protein transport and glycosylation. Hum Mol Genet 27:3029–3045. https://doi.org/10.1093/hmg/ddy213
Bijsmans ITGW, Bouwmeester RAM, Geyer J et al (2012) Homo- and hetero-dimeric architecture of the human liver Na+-dependent taurocholate co-transporting protein. Biochem J 441:1007–1015. https://doi.org/10.1042/BJ20111234
Chen Y-H, Narimatsu Y, Clausen TM et al (2018) The GAGOme: a cell-based library of displayed glycosaminoglycans. Nat Methods 15:881–888. https://doi.org/10.1038/s41592-018-0086-z
Claro da Silva T, Polli JE, Swaan PW (2013) The solute carrier family 10 (SLC10): beyond bile acid transport. Mol Aspects Med 34:252–269. https://doi.org/10.1016/j.mam.2012.07.004
Craddock AL, Love MW, Daniel RW et al (1998) Expression and transport properties of the human ileal and renal sodium-dependent bile acid transporter. Am J Physiol 274:G157-169. https://doi.org/10.1152/ajpgi.1998.274.1.G157
Döring B, Lütteke T, Geyer J, Petzinger E (2012) The SLC10 carrier family: transport functions and molecular structure. Curr Top Membr 70:105–168. https://doi.org/10.1016/B978-0-12-394316-3.00004-1
Dubail J, Huber C, Chantepie S et al (2018) SLC10A7 mutations cause a skeletal dysplasia with amelogenesis imperfecta mediated by GAG biosynthesis defects. Nat Commun 9:3087. https://doi.org/10.1038/s41467-018-05191-8
Fernandes CF, Godoy JR, Döring B, Cavalcanti MCO, Bergmann M, Petzinger E, Geyer J (2007) The novel putative bile acid transporter SLC10A5 is highly expressed in liver and kidney. Biochem Biophys Res Commun 361(1):26–32 https://doi.org/10.1016/j.bbrc.2007.06.160
Foulquier F, Amyere M, Jaeken J et al (2012) TMEM165 deficiency causes a congenital disorder of glycosylation. Am J Hum Genet 91:15–26. https://doi.org/10.1016/j.ajhg.2012.05.002
Foulquier F, Legrand D (2020) Biometals and glycosylation in humans: congenital disorders of glycosylation shed lights into the crucial role of Golgi manganese homeostasis. Biochim Biophys Acta Gen Subj 1864:129674. https://doi.org/10.1016/j.bbagen.2020.129674
Goddard TD, Huang CC, Meng EC et al (2018) UCSF ChimeraX: meeting modern challenges in visualization and analysis. Protein Sci 27:14–25. https://doi.org/10.1002/pro.3235
Godoy JR, Fernandes C, Döring B et al (2007) Molecular and phylogenetic characterization of a novel putative membrane transporter (SLC10A7), conserved in vertebrates and bacteria. Eur J Cell Biol 86:445–460. https://doi.org/10.1016/j.ejcb.2007.06.001
Grosser G, Bennien J, Sánchez-Guijo A et al (2018) Transport of steroid 3-sulfates and steroid 17-sulfates by the sodium-dependent organic anion transporter SOAT (SLC10A6). J Steroid Biochem Mol Biol 179:20–25. https://doi.org/10.1016/j.jsbmb.2017.09.013
Hagenbuch B, Meier PJ (1994) Molecular cloning, chromosomal localization, and functional characterization of a human liver Na+/bile acid cotransporter. J Clin Invest 93:1326–1331
Hagenbuch B, Meier PJ (1996) Sinusoidal (basolateral) bile salt uptake systems of hepatocytes. Semin Liver Dis 16:129–136. https://doi.org/10.1055/s-2007-1007226
Ho RH, Leake BF, Roberts RL et al (2004) Ethnicity-dependent polymorphism in Na+-taurocholate cotransporting polypeptide (SLC10A1) reveals a domain critical for bile acid substrate recognition. J Biol Chem 279:7213–7222. https://doi.org/10.1074/jbc.M305782200
Houdou M, Lebredonchel E, Garat A et al (2019) Involvement of thapsigargin- and cyclopiazonic acid-sensitive pumps in the rescue of TMEM165-associated glycosylation defects by Mn2. FASEB J 33:2669–2679. https://doi.org/10.1096/fj.201800387R
Hu N-J, Iwata S, Cameron AD, Drew D (2011) Crystal structure of a bacterial homologue of the bile acid sodium symporter ASBT. Nature 478:408–411. https://doi.org/10.1038/nature10450
Jiang L, Alber J, Wang J et al (2012) The Candida albicans plasma membrane protein Rch1p, a member of the vertebrate SLC10 carrier family, is a novel regulator of cytosolic Ca2+ homoeostasis. Biochem J 444:497–502. https://doi.org/10.1042/BJ20112166
Karakus E, Zahner D, Grosser G et al (2018) Estrone-3-sulfate stimulates the proliferation of T47D breast cancer cells stably transfected with the sodium-dependent organic anion transporter SOAT (SLC10A6). Front Pharmacol. https://doi.org/10.3389/fphar.2018.00941
Karakus E, Wannowius M, Müller SF et al (2020) The orphan solute carrier SLC10A7 is a novel negative regulator of intracellular calcium signaling. Sci Rep. https://doi.org/10.1038/s41598-020-64006-3
Kosters A, Abebe DF, Felix JC et al (2016) Inflammation-associated upregulation of the sulfated steroid transporter Slc10a6 in mouse liver and macrophage cell lines: Slc10a6 upregulation in hepatic inflammation. Hepatol Res 46:794–803. https://doi.org/10.1111/hepr.12609
Lacruz RS, Feske S (2015) Diseases caused by mutations in ORAI1 and STIM1. Ann NY Acad Sci 1356:45–79. https://doi.org/10.1111/nyas.12938
Larhammar M, Patra K, Blunder M, Emilsson L, Peuckert C, Arvidsson E, Rönnlund D, Preobraschenski J, Birgner C, Limbach C, Widengren J, Blom H, Jahn R, Wallén-Mackenzie Å, Kullander K (2015) SLC10A4 Is a Vesicular Amine-Associated Transporter Modulating Dopamine Homeostasis. Biol Psychiatry 77(6):526–536. https://doi.org/10.1016/j.biopsych.2014.07.017
Laugel-Haushalter V, Bär S, Schaefer E et al (2019) A new SLC10A7 homozygous missense mutation responsible for a milder phenotype of skeletal dysplasia with amelogenesis imperfecta. Front Genet 10:504. https://doi.org/10.3389/fgene.2019.00504
Lu B, Fivaz M (2016) Neuronal SOCE: myth or reality? Trends Cell Biol 26:890–893. https://doi.org/10.1016/j.tcb.2016.09.008
Madeira F, Park YM, Lee J et al (2019) The EMBL-EBI search and sequence analysis tools APIs in 2019. Nucleic Acids Res 47:W636–W641. https://doi.org/10.1093/nar/gkz268
Mortier GR, Cohn DH, Cormier-Daire V et al (2019) Nosology and classification of genetic skeletal disorders: 2019 revision. Am J Med Genet A 179:2393–2419. https://doi.org/10.1002/ajmg.a.61366
Ng BG, Freeze HH (2018) Perspectives on glycosylation and its congenital disorders. Trends Genet 34:466–476. https://doi.org/10.1016/j.tig.2018.03.002
Noppes S, Müller SF, Bennien J et al (2019) Homo- and heterodimerization is a common feature of the solute carrier family SLC10 members. Biol Chem 400:1371–1384. https://doi.org/10.1515/hsz-2019-0148
Splinter PL, Lazaridis KN, Dawson PA, LaRusso NF (2006) Cloning and expression of SLC10A4, a putative organic anion transport protein. World J Gastroenterol 12:6797–6805. https://doi.org/10.3748/wjg.v12.i42.6797
Volpi S, Yamazaki Y, Brauer PM et al (2017) EXTL3 mutations cause skeletal dysplasia, immune deficiency, and developmental delay. J Exp Med 214:623–637. https://doi.org/10.1084/jem.20161525
Wang X, Lyu Y, Ji Y et al (2021) Substrate binding in the bile acid transporter ASBT Yf from Yersinia frederiksenii. Acta Crystallogr D Struct Biol 77:117–125. https://doi.org/10.1107/S2059798320015004
Wong MH, Oelkers P, Dawson PA (1995) Identification of a mutation in the ileal sodium-dependent bile acid transporter gene that abolishes transport activity. J Biol Chem 270:27228–27234. https://doi.org/10.1074/jbc.270.45.27228
Xiao L, Pan G (2017) An important intestinal transporter that regulates the enterohepatic circulation of bile acids and cholesterol homeostasis: the apical sodium-dependent bile acid transporter (SLC10A2/ASBT). Clin Res Hepatol Gastroenterol 41:509–515. https://doi.org/10.1016/j.clinre.2017.02.001
Zhao Y, Yan H, Happeck R et al (2016) The plasma membrane protein Rch1 is a negative regulator of cytosolic calcium homeostasis and positively regulated by the calcium/calcineurin signaling pathway in budding yeast. Eur J Cell Biol 95:164–174. https://doi.org/10.1016/j.ejcb.2016.01.001
Zhou X, Levin EJ, Pan Y et al (2014) Structural basis of the alternating-access mechanism in a bile acid transporter. Nature 505:569–573. https://doi.org/10.1038/nature12811
Zou X, Wang D, Qiu G et al (2005) Molecular cloning and characterization of a novel human C4orf13 gene, tentatively a member of the sodium bile acid cotransporter family. Biochem Genet 43:165–173. https://doi.org/10.1007/s10528-005-1509-y
Funding
This work was supported by grants from the Agence Nationale de la Recherche through the SKELGAG project and EUROGLYCAN-omics under the frame of E-RARE-3, the ERA-Net for Research on Rare Diseases and within the scope of the International Associated Laboratory “Laboratory for the Research on Congenital Disorders of Glycosylation—from cellular mechanisms to cure—GLYCOLAB4CDG”.
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ZD and JD wrote the manuscript with support from DL, VCD and FF. Figures have been made by AL and DL. All authors discussed and revised the manuscript.
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Durin, Z., Dubail, J., Layotte, A. et al. SLC10A7, an orphan member of the SLC10 family involved in congenital disorders of glycosylation. Hum Genet 141, 1287–1298 (2022). https://doi.org/10.1007/s00439-021-02420-x
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DOI: https://doi.org/10.1007/s00439-021-02420-x