Skip to main content
Log in

Analysis of the MdMYB1 gene sequence and development of new molecular markers related to apple skin color and fruit-bearing traits

  • Original Paper
  • Published:
Molecular Genetics and Genomics Aims and scope Submit manuscript

Abstract

MdMYB1, a key transcription factor determining apple skin color, coordinately regulates genes in the anthocyanin pathway. In this study, we analyzed the MdMYB1 gene and its relationship to apple skin color and fruit-bearing traits to better understand this gene and its application to apple breeding. A previously reported MdMYB1 dCAPS marker failed to identify alleles of the MdMYB1 gene in ‘Fuji’, a very important apple cultivar. In this study, we revealed that the polymorphic site related to the MdMYB1 dCAPS marker is heterozygous in ‘Fuji’. In addition, two new polymorphic sites related to apple skin color were identified in the MdMYB1 gene, with two new molecular markers accordingly developed. Testing of these markers in ‘Fuji’ and its progeny revealed that they could predict apple skin color and identify alleles of the MdMYB1 gene in this cultivar. Most interestingly, the allele MdMYB1-2 in ‘Gala’ apple and its hybrid plants was found to be related to the fruit-bearing trait, and the molecular marker Mb2 was able to identify the MdMYB1-2 allele. Our study is apparently the first to report a relationship between the MdMYB1 allele and the fruit-bearing trait in apple. More work is needed to determine whether and how the MdMYB1 gene or a gene linked to the MdMYB1-2 allele influences the flowering trait in perennial apple trees, and whether flowering in other plants is influenced by related genes.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6

Similar content being viewed by others

References

  • Ban Y, Honda C, Hatsuyama Y, Igarashi M, Bessho H, Moriguchi T (2007) Isolation and functional analysis of a MYB transcription factor gene that is a key regulator for the development of red coloration in apple skin. Plant Cell Physiol 48(7):958–970

    Article  CAS  PubMed  Google Scholar 

  • Chen JX, Shi Q, Wang YR et al (1985) Apples of Hebei, fruit trees of Hebei, vol III. Agricultural Publishing House, Beijing, pp 594-599

  • Chen ZF, Chen YH, Wang J, Zhang JL, Wang GX, Ma XC, Song JW (1998) Studies on genetics of main economic characters in apple. Acta Agri Uni Henanensis 31(3):238–243

    Google Scholar 

  • Chen DM, Li CM, Zhao YB, Zhang XZ, Yang FQ (2008) Research on the advanced flower of apple seedling treated by growth regulator. J Agric Sci 12(8):16–17

    Google Scholar 

  • Drenkard E, Richter BG, Rozen S, Stutius LM, Angell NA, Mindrinos M, Cho RJ, Oefner PJ, Davis RW, Ausubel FM (2000) A simple procedure for the analysis of single nucleotide polymorphisms facilitates map-based cloning in Arabidopsis. Plant Physiol 124:1483–1492

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Espley RV, Hellens RP, Putterill J, Stevenson DE, Kutty-Amma S, Allan AC (2007) Red colouration in apple fruit is due to the activity of the MYB transcription factor, MdMYB10. Plant J 49:414–427

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Espley RV, Brendolise C, Chagnè D, Kutty-Amma S, Green S, Volz R, Putterill J, Schouten HJ, Gardiner SE, Hellens RP, Allan AC (2009) Multiple repeats of a promoter segment causes transcription factor autoregulation in red apples. Plant Cell 21:168–183

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Huang LX, Li ZQ, Wei HR, Yuan KJ, Liu QZ (2009) Gene-based molecular marker in relation to apple skin color and its utilization. Acta Hortic Sin 36 (Suppl):1882

    Google Scholar 

  • Huang LX, Li ZQ, Wei HR, Yuan KJ, Liu QZ (2010) Genetic analysis and prediction of red skin traits of apple hybrid plants. Genomics Appl Biol 29(6):1097–1101 (in Chinese with English abstract)

    CAS  Google Scholar 

  • Konieczny A, Ausubel FM (1993) A procedure for mapping Arabidopsis mutations using co-dominant ecotype-specific markers. Plant J 4:403–410

    Article  CAS  PubMed  Google Scholar 

  • Liu Y, Li X, Li K, Liu H, Lin C (2013) Multiple bHLH proteins form heterodimers to mediate CRY2-dependent regulation of flowering-time in Arabidopsis. PLoS Genet 9(10):e1003861

    Article  PubMed Central  PubMed  Google Scholar 

  • Neff MM, Neff JD, Chory J, Pepper AE (1998) dCAPS, a simple technique for the genetic analysis of single nucleotide polymorphisms: experimental applications in Arabidopsis thaliana genetics. Plant J 14:387–392

    Article  CAS  PubMed  Google Scholar 

  • Takos AM, Jaffé FW, Jacob SR, Bogs J, Robinson SP, Walker AR (2006) Light- induced expression of a MYB gene regulates anthocyanin biosynthesis in red apples. Plant Physiol 142:1216–1232

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Yuan KJ (2005) An improved method for development of CAPS markers in Arabidopsis thaliana. J Agric Biotechnol 13(5):580–586 (in Chinese)

    CAS  Google Scholar 

  • Yuan KJ, Liu QZ, Li B, Zhang LS (2008) Genomic structure and sequence polymorphism of E,E-alpha farnesene synthase gene in apples (Malus domestica Borkh.). Front Agric China 2(2):190–193 (translated from Chinese version, Yuan KJ, Liu QZ, Li B, Zhang LS (2007) Acta Hortic Sin 34(4):1003–1006)

  • Yuan KJ, Wang CJ, Xin L, Zhang AN, Ai CX (2013) Genomic organization and expression analysis of a farnesyl diphosphate synthase gene (FPPS2) in apples (Malus domestica Borkh.). Gene 524:90–94

    Article  CAS  PubMed  Google Scholar 

  • Zhang M, Ding YY, Xie CX, Zhang JE, Gao AN, Sha SF (1997) The genetic tendency of Golden Delicious apple hybrid progeny. Hereditas (Beijing) 20(Suppl):95–97

    CAS  Google Scholar 

  • Zhu YM, Evans K, Peace C (2011) Utility testing of an apple skin color MdMYB1 marker in two progenies. Mol Breed 27(1):525–532

    Article  Google Scholar 

Download references

Acknowledgments

This work was supported by the Research Foundation of the Shandong Human Resources and Social Security Department for Returned Overseas Chinese and the Elite Cultivars Breeding Project of Shandong Province, China. The publication of this paper was supported by open research funding from the National Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences. The authors thank Xiaoya Chen and Lingjian Wang, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, for their assistance.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Kejun Yuan.

Additional information

Communicated by S. Hohmann.

Electronic supplementary material

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Yuan, K., Wang, C., Wang, J. et al. Analysis of the MdMYB1 gene sequence and development of new molecular markers related to apple skin color and fruit-bearing traits. Mol Genet Genomics 289, 1257–1265 (2014). https://doi.org/10.1007/s00438-014-0886-5

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00438-014-0886-5

Keywords

Navigation