Skip to main content
Log in

Caenorhabditis elegans dpy-14: an essential collagen gene with unique expression profile and physiological roles in early development

  • Original Paper
  • Published:
Molecular Genetics and Genomics Aims and scope Submit manuscript

Abstract

We describe the molecular characterisation of Caenorhabditis elegans dpy-14, a gene encoding an essential cuticular collagen annotated as col-59. Expression of dpy-14 starts at the 16 E cell stage, making it the earliest-expressing collagen reported to date. SAGE data and dpy-14 promoter::GFP reporter constructs indicate that the gene is transcribed mainly during embryogenesis, specifically in ciliated neurons and hypoderm. Water permeability assays and lectin staining showed that a mutation in the DPY-14 collagen results in defects in the channels of the amphids, which are a class of ciliated neuron, while the amphids appear morphologically normal by dye filling methods. Behavioural assays showed that the ciliated neurons expressing the gene are functional in dpy-14 mutants. All together, our data suggest that ciliated neurons and their hypodermal support cells collaborate in the transcription and synthesis of DPY-14, which then becomes a component of the amphid channels but not of the amphids proper. Interestingly, seam cells of dpy-14 mutants do not properly fuse to form a syncytium. This novel phenotype due to collagen mutations further stresses that dpy-14 plays a fundamental role in C. elegans physiology, since it is required for the proper development of the hypoderm.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6
Fig. 7

Similar content being viewed by others

References

  • Ansley SJ, Badano JL, Blacque OE, Hill J, Hoskins BE, Leitch CC, Kim JC, Ross AJ, Eichers ER, Teslovich TM, Mah AK, Johnsen RC, Cavender JC, Lewis RA, Leroux MR, Beales PL, Katsanis N (2003) Basal body dysfunction is a likely cause of pleiotropic Bardet–Biedl syndrome. Nature 425:628–633

    Article  PubMed  CAS  Google Scholar 

  • Bargmann CI, Horvitz HR (1991) Control of larval development by chemosensory neurons in Caenorhabditis elegans. Science 251:1243–1246

    Article  PubMed  CAS  Google Scholar 

  • Bargmann CL, Hartweg E, Horvitz HR (1993) Odorant-selective genes and neurons mediate olfaction in C. elegans. Cell 74:515–527

    Article  PubMed  CAS  Google Scholar 

  • Bella J, Eaton M, Brodsky B, Berman HM (1994) Crystal and molecular structure of a collagen-like peptide at 1.9 Å resolution. Science 266:75–81

    Article  PubMed  CAS  Google Scholar 

  • Brenner S (1974) The genetics of Caenorhabditis elegans. Genetics 77:71–94

    PubMed  CAS  Google Scholar 

  • Culotti JG, Russell RL (1978) Osmotic avoidance defective mutants of the nematode Caenorhabditis elegans. Genetics 90:243–256

    PubMed  CAS  Google Scholar 

  • Du H, Gu G, William CM, Chalfie M (1996) Extracellular proteins needed for C. elegans mechanosensation. Neuron 16:183–194

    Article  PubMed  CAS  Google Scholar 

  • Dusenberry DB, Sheridan RE, Russell RL (1975) Chemotaxis-defective mutants of the nematode Caenorhabditis elegans. Genetics 80:297–309

    PubMed  Google Scholar 

  • von Ehrenstein G, Schierenberg E (1980) Cell lineages and development of Caenorhabditis elegans and other nematodes. In: Zuckerman BM (ed) Nematodes as biological models. Academic, New York, pp 10–11

    Google Scholar 

  • Emtage L, Gu G, Hartwieg E, Chalfie M (2004) Extracellular proteins organize the mechanosensory channel complex in C. elegans touch receptor neurons. Neuron 44:795–807

    Article  PubMed  CAS  Google Scholar 

  • Gilleard JS, Barry JD, Johnstone IL (1997) cis regulatory requirements for hypodermal cell-specific expression of the Caenorhabditis elegans cuticle collagen gene dpy-7. Mol Cell Biol 17:2301–2311

    PubMed  CAS  Google Scholar 

  • Harrow ID, Gration KAF (1985) Mode of action of the anthelmintics morantel, pyrantel and levamisole on muscle cell membrane of the nematode Ascaris suum. Pestic Sci 16:662–672

    Article  CAS  Google Scholar 

  • Hobert O (2002) PCR fusion-based approach to create reporter gene constructs for expression analysis in transgenic C. elegans. Biotechniques 32:728–730

    PubMed  CAS  Google Scholar 

  • Inouye S, Tsuji FI (1994) Evidence for redox forms of the Aequorea green fluorescent protein. FEBS Lett 351:211–214

    Article  PubMed  CAS  Google Scholar 

  • Johnstone IL (2000) Cuticle collagen genes expression in Caenorhabditis elegans. Trends Genet 16:21–27

    Article  PubMed  CAS  Google Scholar 

  • Ko FCF, Chow KL (2000) Mutations with sensory ray defect unmask cuticular glycoprotein antigens in Caenorhabditis elegans male tail. Dev Growth Differ 42:69–77

    Article  PubMed  CAS  Google Scholar 

  • Kramer JC (1994) Structures and functions of collagens in Caenorhabditis elegans. FASEB J 8:329–336

    PubMed  CAS  Google Scholar 

  • Kramer JM (1997) Extracellular matrix. In: Riddle DL, Blumenthal T, Meyer BJ, Priess JR (eds) C. elegans II. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, pp 471–500

    Google Scholar 

  • Kramer RZ, Bella J, Mayville P, Brodsky B, Berman HM (1999) Sequence dependent conformational variations of collagen triple-helical structure. Nat Struct Biol 6:454–457

    Article  PubMed  CAS  Google Scholar 

  • Li X, Zhao X, Fang Y, Jiang X, Duong T, Connie F, Huang C, Kain SR (1998) Generation of destabilized green fluorescent protein as a transcription reporter. J Biol Chem 273:34970–34975

    Article  PubMed  CAS  Google Scholar 

  • Link CD, Ehrenfels CW, Wood WB (1988) Mutant expression of male copulatory bursa surface markers in Caenorhabditis elegans. Development 103:485–495

    PubMed  CAS  Google Scholar 

  • Link CD, Silverman MA, Breen M, Watt KE, Dames SA (1992) Characterization of Caenorhabditis elegans lectin-binding mutants. Genetics 151:867–881

    Google Scholar 

  • Maeda I, Kohara Y, Yamamoto M, Sugimoto A (2001) Large-scale analysis of gene function in Caenorhabditis elegans by high-throughput RNAi. Curr Biol 11:171–176

    Article  PubMed  CAS  Google Scholar 

  • McKay SJ, Johnsen R, Khattra J, Asano J, Baillie DL, Chan S, Dube N, Fang L, Goszczynski B, Ha E, Halfnight E, Hollebakken R, Huang P, Hung K, Jensen V, Jones SJM, Kai H, Li D, Mah A, Marra M, McGhee J, Newbury R, Pouzyrev A, Riddle DL, Sonnhammer E, Tian H, Tu D, Tyson JR, Vatcher G, Warner A, Wong K, Zhao Z, Moerman DG (2003) Gene expression profiling of cells, tissues, and developmental stages of the nematode C. elegans. Cold Spring Harb Symp Quant Biol 68:159–169

    Article  PubMed  CAS  Google Scholar 

  • Meeks M, Bush A (2000) Primary ciliary dyskinesia (PCD). Pediatr Pulm 29:307–316

    Article  CAS  Google Scholar 

  • Mello CC, Kramer JM, Stinchcomb D, Ambros V (1991) Efficient gene transfer in C. elegans: extrachromosomal maintenance and integration of transforming sequences. EMBO J 10:3959–3970

    PubMed  CAS  Google Scholar 

  • Myllyharju J, Kivirikko KI (2004) Collagens, modifying enzymes and their mutations in humans, flies and worms. Trends Genet 20:33–43

    Article  PubMed  CAS  Google Scholar 

  • Novelli J, Ahmed S, Hodgin J (2004) Gene interactions in Caenorhabditis elegans define DPY-31 as a candidate procollagen C-proteinase and SQT-3/ROL-4 as its predicted major target. Genetics 168:1259–1273

    Article  PubMed  CAS  Google Scholar 

  • Perkins LA, Hedgecock EM, Thomson JN, Culotti JG (1986) Mutant sensory cilia in the nematode Caenorhabditis elegans. Dev Biol 117:456–487

    Article  PubMed  CAS  Google Scholar 

  • Pierce-Shimomura JT, Faumont S, Gaston MR, Pearson BJ, Lockery SR (2001) The homeobox gene lim-6 is required for distinct chemosensory representations in C. elegans. Nature 412:566

    Article  CAS  Google Scholar 

  • Podbilewicz B, White JG (1994) Cell fusions in the developing epithelia of C. elegans. Dev Biol 161:408–424

    Article  PubMed  CAS  Google Scholar 

  • Prasad SS, Starr TV, Rose AM (1993) Molecular characterization in the dpy-14 region identifies the S-adenosylhomocysteine hydrolase gene in Caenorhabditis elegans. Genome 36:57–64

    Article  PubMed  CAS  Google Scholar 

  • Prockop DJ, Kirivikko KI (1995) Collagens: molecular biology, diseases, and potentials for therapy. Annu Rev Biochem 64:403–434

    Article  PubMed  CAS  Google Scholar 

  • Starich TA, Herman RK, Kari CK, Yeh W, Schackwitz WS, Schuyler MW, Collet J, Thomas JH, Riddle DL (1995) Mutations affecting the chemosensory neurons of Caenorhabditis elegans. Genetics 139:171–188

    PubMed  CAS  Google Scholar 

  • Stinchcomb DT, Shaw JE, Carr SH, Hirsh D (1985) Extrachromosomal DNA transformation of Caenorhabditis elegans. Mol Cell Biol 5:3484–3496

    PubMed  CAS  Google Scholar 

  • Sulston JE, Schierenberg E, White JG, Thomson JN (1983) The embryonic cell lineage of the nematode Caenorhabditis elegans. Dev Biol 100:64–119

    Article  PubMed  CAS  Google Scholar 

  • Thacker C, Srayko M, Rose AM (2000) Mutational analysis of bli-4/kpc-4 reveals critical residues required for preprotein convertase function in C. elegans. Gene 252:15–25

    Article  PubMed  CAS  Google Scholar 

  • Thein MC, McCormack G, Winter AD, Johnstone IL, Schoemaker CB, Page AP (2003) Caenorhabditis elegans exoskeleton collagen COL-19: an adult-specific marker for collagen modification and assembly, and the analysis of organismal morphology. Dev Dyn 226:523–539

    Article  PubMed  CAS  Google Scholar 

  • Vowels JJ, Thomas JH (1994) Multiple chemosensory defects in daf-11 and daf-21 mutants of Caenorhabditis elegans. Genetics 138:303–316

    PubMed  CAS  Google Scholar 

  • Ward S, Thomson N, White JG, Brenner S (1975) Electron microscopical reconstruction of the anterior sensory anatomy of the nematode Caenorhabditis elegans. J Comp Neurol 160:313–337

    Article  PubMed  CAS  Google Scholar 

  • Ware RW, Clark D, Crossland K, Russell RL (1975) The nerve ring of the nematode Caenorhabditis elegans: sensory input and motor output. J Comp Neurol 162:71–110

    Article  Google Scholar 

  • Winter AD, Page AP (2000) Prolyl 4-hydroxylase is an essential procollagen-modifying enzyme required for exoskeleton formation and the maintenance of body shape in the nematode Caenorhabditis elegans. Mol Cell Biol 20:4084–4093

    Article  PubMed  CAS  Google Scholar 

  • Wood WB (ed) (1988a) The nematode Caenorhabditis elegans. Cold Spring Harbor Monograph series 17. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, p 509

  • Wood WB (ed) (1988b) The nematode Caenorhabditis elegans. Cold Spring Harbor Monograph series 17. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, p 12

  • Wright KA (1980) Nematode sense organs. In: Zuckerman BM (ed) Nematodes as biological models. Academic, New York, pp 237–295

    Google Scholar 

  • Yochem J, Gu T, Han M (1998) A new marker for mosaic analysis in Caenorhabditis elegans indicates a fusion between hyp6 and hyp7, two major components of hypodermis. Genetics 149:1323–1334

    PubMed  CAS  Google Scholar 

  • Zhang YJ, O’Neal WK, Randell SH, Blackburn K, Mayer MB, Boucher RC, Ostrowski LEJ (2002) Identification of dynein heavy chain 7 as an inner arm component of human cilia that is synthesized but not assembled in a case of primary ciliary dyskinesia. J Biol Chem 277:17906–17915

    Article  PubMed  CAS  Google Scholar 

Download references

Acknowledgements

We thank Dr Oliver E. Blacque for insightful discussions on the structure and function of the C. elegans ciliated neurons and on the experimental approach to analyse them. Thanks also to Martin Jones and Dr Nigel O’Neal for important comments and discussions. Strains were obtained from the CGC. SAGE data were obtained from the Genome BC C. elegans Gene Expression Consortium (http://www.elegans.bcgsc.bc.ca/). These SAGE data were produced at the Michael Smith Genome Sciences Centre with funding from Genome Canada. Funding for the present study was provided by the Natural Sciences and Engineering Research Council (NSERC) of Canada to DLB and AMR.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to David L. Baillie.

Additional information

Communicated by S. Hohmann

Rights and permissions

Reprints and permissions

About this article

Cite this article

Gallo, M., Mah, A.K., Johnsen, R.C. et al. Caenorhabditis elegans dpy-14: an essential collagen gene with unique expression profile and physiological roles in early development. Mol Genet Genomics 275, 527–539 (2006). https://doi.org/10.1007/s00438-006-0110-3

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00438-006-0110-3

Keywords

Navigation