Skip to main content
Log in

Characterization and mapping of Rpi1, a gene that confers dominant resistance to stalk rot in maize

  • Original Paper
  • Published:
Molecular Genetics and Genomics Aims and scope Submit manuscript

Abstract

The maize inbred lines 1145 (resistant) and Y331 (susceptible), and the F1, F2 and BC1F1 populations derived from them were inoculated with the pathogen Pythium inflatum Matthews, which causes stalk rot in Zea mays. Field data revealed that the ratio of resistant to susceptible plants was 3:1 in the F2 population, and 1:1 in the BC1F1population, indicating that the resistance to P. inflatum Matthews was controlled by a single dominant gene in the 1145×Y331 cross. The gene that confers resistance to P. inflatum Matthews was designated Rpi1 for resistance to P. inflatum) according to the standard nomenclature for plant disease resistance genes. Fifty SSR markers from 10 chromosomes were first screened in the F2 population to find markers linked to the Rpi1 gene. The results indicated that umc1702 and mmc0371 were both linked to Rpi1, placing the resistance gene on chromosome 4. RAPD (randomly amplified polymorphic DNA) markers were then tested in the F2population using bulked segregant analysis (BSA). Four RAPD products were found to show linkage to the Rpi1 gene. Then 27 SSR markers and 8 RFLP markers in the region encompassing Rpi1 were used for fine-scale mapping of the resistance gene. Two SSR markers and four RFLP markers were linked to the Rpi1 gene. Finally, the Rpi1 gene was mapped between the SSR markers bnlg1937 and agrr286 on chromosome 4, 1.6 cM away from the former and 4.1 cM distant from the latter. This is the first time that a dominant gene for resistance to maize stalk rot caused by P. inflatum Matthews has been mapped with molecular marker techniques.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1.
Fig. 2.
Fig. 3.
Fig. 4.
Fig. 5.

Similar content being viewed by others

References

  • Byrne PF, McMullen MD, Snook ME, Musket T, Widstrom NW, Wiseman BR (1995) Quantitative genetic analysis of loci controlling synthesis of maysin, a corn earworm resistance factor, in maize silks. Maize Coop Newslett 69:53–54

    Google Scholar 

  • Chen SJ, Song TM (1999) Disease resistance of maize stalk rot–simple genetics controlled by single gene. Acta Chin Agric Univ 4:56

    Google Scholar 

  • Christensen JJ, Wilcoxon RD (1966) Stalk rot of corn. American Phytopathological Society, St. Paul, Minn

    Google Scholar 

  • Dias AP, Braun EL, McMullen MD, Grotewold E (2003) Recently developed maize r2r3 myb genes provide evidence for distinct mechanisms of evolutionary divergence after duplication. Plant Physiol 131:610–620

    Article  PubMed  CAS  Google Scholar 

  • Jim S (1999) Common stalk rot disease of corn. Plant Dis 6:1–8

    Google Scholar 

  • Lander ES, Green P, Abrahamson J, Barlow A, Daly MJ, Lincolin SE, Etoh J (1987) Mapmaker: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1:174–181

    Article  PubMed  CAS  Google Scholar 

  • McCouch SR, Kochert G, Tu ZH, Wang ZY, Khush GS, Coffman WR, Tanksley SD (1988) Molecular mapping of rice chromosome. Theor Appl Genet 76:815–729

    Article  CAS  Google Scholar 

  • McMullen M, Simcox KD (1995) Clustering of disease resistance loci in the maize genome. Maize Coop Newslett 69:52–53

    Google Scholar 

  • Pe ME, Gianfranceshi L, Taramino G, et. al. (1993) Mapping quantitative trait loci (QTLs) for resistance to Gibberella zeae infection in maize. Mol Gen Genet 241:11–16

    Article  PubMed  CAS  Google Scholar 

  • Stack RW, Elias EM, Joppa LR (1999) Fusarium head blight reaction of durum wheat lines conditioned by Triticum dicoccoides chromosome substitutions. Phytopathology 89(Suppl):S74

    Google Scholar 

  • Tesfaye T, Larry EC, Mitchell RT (2004) Estimation of combining ability for resistance to Fusarium stalk rot in grain sorghum. Crop Sci 44:1195

    Article  Google Scholar 

  • Thon MR, Nuckles EM, Takach JE, Vaillancourt LJ (2002) CPR1: a gene encoding a putative signal peptidase that functions in pathogenicity of Colletotrichum graminicola to maize. Mol Plant Microbe Interact 15:120–128

    Article  PubMed  CAS  Google Scholar 

  • Toman J, White DG (1993) Inheritance of resistance to anthracnose stalk rot of corn. Phytopathology 83:981–986

    Article  Google Scholar 

  • Wu QA, Zhu XY, Lin HX, Jin TJ, Wang GY (1997) Methodological study on the isolation and determination of infectious ability of the pathogen for maize stalk rot. Plant Pathol 27:29–35

    Google Scholar 

  • Yang DE, Chen SJ, Wang YG (2000) Genetic analysis of resistance to stalk rot (caused by Pythium inflatum Mattews) in maize. Chin Acta Phytopathol 28:392–396

    CAS  Google Scholar 

  • Yang DE, Zhang CL, Wang YG (2002a) Review of maize stalk rot in China. J Maize Sci 1:4–6

    Google Scholar 

  • Yang DE, Zhang CL, Wang YG (2002b) Study on the Rfg1 (resistance to Fusarium graminearum Schw) in maize. Acta Agron Sinica 28:129–133

    Google Scholar 

  • Yang DE, Zhang CL, Zhang DS, Jin DM, Weng ML, Chen SJ, Nguyen H, Wang B (2004) Genetics analysis and molecular mapping of maize (Zea mays L.) stalk rot resistant gene Rfg1. Theor Appl Genet 108:706–711

    Article  PubMed  CAS  Google Scholar 

  • Zhang CL (2000) Molecular biological analysis of maize stalk rot resistant gene. Ph.D. thesis. Institute of Genetics, Chinese Academy of Sciences

Download references

Acknowledgements

This work was supported by the 10th Five-Year Research Program of Science and Technology in China (2001BA511B04) and the State Key Basic Research and Development Plan of China (2001CB108802). The maize RFLP probes were kindly provided by Professor Ed Coe (University of Missouri, Columbia, Mo., USA). The strain Pythium inflatum Mattew was kindly donated by Professor Xiaoming Wang, Chinese Academy of Agricultural Sciences. All maize seeds were JPEGts from Professor Song Tongming, China Agricultural University

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to B. Wang.

Additional information

Communicated by R. Hagemann

Rights and permissions

Reprints and permissions

About this article

Cite this article

Yang, D., Jin, D., Wang, B. et al. Characterization and mapping of Rpi1, a gene that confers dominant resistance to stalk rot in maize. Mol Genet Genomics 274, 229–234 (2005). https://doi.org/10.1007/s00438-005-0016-5

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00438-005-0016-5

Key words:

Navigation