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A rapid screen for functional mutants of TraM, an autoregulatory protein required for F conjugation

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Abstract

TraM is an autoregulatory protein required for conjugative transfer of the F plasmid. A rapid screening procedure was developed to select for traM mutants constructed by random PCR mutagenesis. The mutated traM gene was cloned into pT7-5, without the traM promoters (collectively called P traM ), such that these mutants were expressed from the downstream traJ promoter, resulting in constitutive, low-level, transcription of traM by polymerases that had circumnavigated the plasmid. P traM was cloned into pPR9tt as a translational fusion in which a DNA fragment containing P traM , the ribosome binding site and first 24 codons of traM was fused to the 5′ end of lacZ. To downregulate β-galactosidase expression, a −1 frameshift mutation was introduced at the junction between traM and lacZ in the fusion. Selected TraM mutants were further characterized for their intracellular levels, electrophoretic mobility on nondenaturing gels, and activity in F conjugation. Point mutations throughout TraM were found to affect both autoregulation and conjugative function.

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References

  • Abo T, Ohtsubo E (1993) Repression of the traM gene of plasmid R100 by its own product and integration host factor at one of the two promoters. J Bacteriol 175:4466–4474

    CAS  PubMed  Google Scholar 

  • Abo T, Inamoto S, Ohtsubo E (1991) Specific DNA binding of the TraM protein to the oriT region of plasmid R100. J Bacteriol 173:6347–6354

    CAS  PubMed  Google Scholar 

  • Bingle LEH, Thomas CM (2001) Regulatory circuits for plasmid survival. Curr Opin Microbiol 4:194–200

    Article  CAS  PubMed  Google Scholar 

  • Chandler M, Galas DJ (1983) Cointegrate formation mediated by Tn9. II. Activity of IS1 is modulated by external DNA sequences. J Mol Biol 170:61–91

    CAS  PubMed  Google Scholar 

  • Chang AC, Cohen SN (1978) Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid. J Bacteriol 134:1141–1156

    CAS  PubMed  Google Scholar 

  • Di Laurenzio L, Frost LS, Paranchych W (1992) The TraM protein of the conjugative plasmid F binds to the origin of transfer of the F and ColE1 plasmids. Mol Microbiol 6:2951–2959

    PubMed  Google Scholar 

  • Disque-Kochem C, Dreiseikelmann B (1997) The cytoplasmic DNA-binding protein TraM binds to the inner membrane protein TraD in vitro. J Bacteriol 179:6133–6137

    PubMed  Google Scholar 

  • Fekete RA, Frost LS (2002) Characterizing the DNA contacts and cooperative binding of F plasmid TraM to its cognate sites at oriT. J Biol Chem 277:16705–16711

    Article  CAS  PubMed  Google Scholar 

  • Frost L, Lee S, Yanchar N, Paranchych W (1989) finP and fisO mutations in FinP anti-sense RNA suggest a model for FinOP action in the repression of bacterial conjugation by the Flac plasmid JCFL0. Mol Gen Genet 218:152–160

    CAS  PubMed  Google Scholar 

  • Frost LS, Ippen-Ihler K, Skurray RA (1994) Analysis of the sequence and gene products of the transfer region of the F sex factor. Microbiol Rev 58:162–210

    CAS  PubMed  Google Scholar 

  • Fu YH, Tsai MM, Luo YN, Deonier RC (1991) Deletion analysis of the F plasmid oriT locus. J Bacteriol 173:1012–1020

    CAS  PubMed  Google Scholar 

  • Hanahan D (1983) Studies on transformation of Escherichia coli with plasmids. J Mol Biol 166:557–580

    CAS  PubMed  Google Scholar 

  • Kupelwieser G, Schwab M, Hogenauer G, Koraimann G, Zechner EL (1998) Transfer protein TraM stimulates TraI-catalyzed cleavage of the transfer origin of plasmid R1 in vivo. J Mol Biol 275:81–94

    Google Scholar 

  • Kurland CG (1992) Translational accuracy and the fitness of bacteria. Annu Rev Genet 26:29–50

    Article  CAS  PubMed  Google Scholar 

  • Lu J, Manchak J, Klimke W, Davidson C, Firth N, Skurray RA, Frost LS (2002) Analysis and characterization of IncFV plasmid pED208 transfer region. Plasmid 48:24–37

    Article  CAS  PubMed  Google Scholar 

  • Miller JH (1972) Experiments in molecular genetics. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y., pp 352–355

  • Moore D, Wu JH, Kathir P, Hamilton CM, Ippen-Ihler K (1987) Analysis of transfer genes and gene products within the traB - traC region of the Escherichia coli fertility factor, F. J Bacteriol 169:3994–4002

    CAS  PubMed  Google Scholar 

  • Penfold SS, Simon J, Frost LS (1996) Regulation of the expression of the traM gene of the F sex factor of Escherichia coli. Mol Microbiol 20:549–558

    CAS  PubMed  Google Scholar 

  • Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning: a laboratory manual (2nd edn). Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.

    Google Scholar 

  • Santos PM, Di B, Blatny IJM, Zennaro E, Valla S (2001) New broad-host-range promoter probe vectors based on the plasmid RK2 replicon. FEMS Microbiol Lett 195:91–96

    Article  CAS  PubMed  Google Scholar 

  • Schwab M, Gruber H, Hogenauer G (1991) The TraM protein of plasmid R1 is a DNA-binding protein. Mol Microbiol 5:439–446

    CAS  PubMed  Google Scholar 

  • Schwab M, Reisenzein H, Hogenauer G (1993) TraM of plasmid R1 regulates its own expression. Mol Microbiol 7:795–803

    CAS  PubMed  Google Scholar 

  • Speicher DW (1995) One-dimensional electrophoresis using nondenaturing conditions. In: Coligan JE, Dunn BM, Ploegh HL, Speicher DW, Wingfield PT (eds) Current protocols in protein science. John Wiley, New York, pp 10.3.1–10.3.11

  • Tabor S, Richardson CC (1985) A bacteriophage T7 RNA polymerase/promoter system for controlled exclusive expression of specific genes. Proc Natl Acad Sci USA 82:1074–1078

    CAS  PubMed  Google Scholar 

  • Tindall KR, Kunkel TA (1988) Fidelity of DNA synthesis by the Thermus aquaticus DNA polymerase. Biochemistry 27:6008–6013

    CAS  PubMed  Google Scholar 

  • Verdino P, Keller W, Strohmaier H, Bischof K, Lindner H, Koraimann G (1999) The essential transfer protein TraM binds to DNA as a tetramer. J Biol Chem 274:37421–37428

    Article  CAS  PubMed  Google Scholar 

  • Vieira J, Messing J (1987) Production of single-stranded plasmid DNA. Methods Enzymol 153:3–11

    PubMed  Google Scholar 

  • Willetts NS, Finnegan DJ (1970) Characteristics of E. coli K12 strains carrying both an F prime and an R factor. Genet Res 16:113–122

    CAS  PubMed  Google Scholar 

  • Willetts NS, Wilkins B (1984) Processing of plasmid DNA during bacterial conjugation. Microbiol Rev 48:24–41

    CAS  PubMed  Google Scholar 

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Acknowledgements

We thank Jan Manchak and Troy Locke for technical assistance. pPR9tt was kindly provided by Svein Valla (Dept. of Biotechnology, Norwegian University of Science and Technology, Trondheim). This work is supported by the Canadian Institutes for Health Research. J. L. is supported by a studentship from the Alberta Ingenuity Fund. R.A.F is supported by a studentship from the Alberta Heritage Foundation for Medical Research. This work was done in compliance with the laws of Canada

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Correspondence to L. S. Frost.

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Communicated by W. Goebel

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Lu, J., Fekete, R.A. & Frost, L.S. A rapid screen for functional mutants of TraM, an autoregulatory protein required for F conjugation. Mol Gen Genomics 269, 227–233 (2003). https://doi.org/10.1007/s00438-003-0826-2

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  • DOI: https://doi.org/10.1007/s00438-003-0826-2

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